RNA–Protein interactions for RNA: ENST00000311550.9

GABRB3-202, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GABRB3, Length 5,781 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-202ENST00000311550 RFKQ969G6 155 aa16.72■□□□□ 0.27
GABRB3-202ENST00000311550 TM9SF3Q9HD45 589 aa16.72■□□□□ 0.27
GABRB3-202ENST00000311550 MRPS30Q9NP92 439 aaKnown RBP16.72■□□□□ 0.27
GABRB3-202ENST00000311550 EBF1Q9UH73 591 aa16.72■□□□□ 0.27
GABRB3-202ENST00000311550 IKZF2Q9UKS7 526 aa16.72■□□□□ 0.27
GABRB3-202ENST00000311550 MRPS33Q9Y291 106 aaKnown RBP16.72■□□□□ 0.27
GABRB3-202ENST00000311550 MAN2B2Q9Y2E5 1009 aa16.72■□□□□ 0.27
GABRB3-202ENST00000311550 A6NHS1 94 aa16.72■□□□□ 0.27
GABRB3-202ENST00000311550 AFF1P51825 1210 aaKnown RBP16.72■□□□□ 0.27
GABRB3-202ENST00000311550 DNASE1L3Q13609 305 aa16.72■□□□□ 0.27
GABRB3-202ENST00000311550 TYSND1Q2T9J0 566 aa16.72■□□□□ 0.27
GABRB3-202ENST00000311550 ZNF829Q3KNS6 432 aaPredicted RBP16.72■□□□□ 0.27
GABRB3-202ENST00000311550 KIAA1614Q5VZ46 1190 aa16.72■□□□□ 0.27
GABRB3-202ENST00000311550 TICAM1Q8IUC6 712 aa16.72■□□□□ 0.27
GABRB3-202ENST00000311550 ZNF563Q8TA94 476 aa16.72■□□□□ 0.27
GABRB3-202ENST00000311550 R3HDMLQ9H3Y0 253 aa16.72■□□□□ 0.27
GABRB3-202ENST00000311550 SP140LQ9H930 580 aa16.72■□□□□ 0.27
GABRB3-202ENST00000311550 A0A1B0GUL6 1792 aa16.72■□□□□ 0.27
GABRB3-202ENST00000311550 UBE2QL1A1L167 161 aa16.72■□□□□ 0.27
GABRB3-202ENST00000311550 RIIAD1A6NNX1 92 aa16.72■□□□□ 0.27
GABRB3-202ENST00000311550 ARHGEF33A8MVX0 844 aa16.72■□□□□ 0.27
GABRB3-202ENST00000311550 DHFRP00374 187 aa16.72■□□□□ 0.27
GABRB3-202ENST00000311550 TYRP14679 529 aa16.72■□□□□ 0.27
GABRB3-202ENST00000311550 IGFBP4P22692 258 aa16.72■□□□□ 0.27
GABRB3-202ENST00000311550 TIE1P35590 1138 aa16.72■□□□□ 0.27
GABRB3-202ENST00000311550 NOXRED1Q6NXP6 359 aa16.72■□□□□ 0.27
GABRB3-202ENST00000311550 C3orf58Q8NDZ4 430 aa16.72■□□□□ 0.27
GABRB3-202ENST00000311550 OR8J3Q8NGG0 315 aa16.72■□□□□ 0.27
GABRB3-202ENST00000311550 CITED4Q96RK1 184 aa16.72■□□□□ 0.27
GABRB3-202ENST00000311550 PCDHB3Q9Y5E6 796 aa16.72■□□□□ 0.27
GABRB3-202ENST00000311550 IQCMA0A1B0GVH7 501 aa16.72■□□□□ 0.27
GABRB3-202ENST00000311550 MMP20O60882 483 aa16.72■□□□□ 0.27
GABRB3-202ENST00000311550 OMPP47874 163 aa16.72■□□□□ 0.27
GABRB3-202ENST00000311550 CCR8P51685 355 aa16.72■□□□□ 0.27
GABRB3-202ENST00000311550 KANK2Q63ZY3 851 aa16.72■□□□□ 0.27
GABRB3-202ENST00000311550 CXCL16Q9H2A7 254 aa16.72■□□□□ 0.27
GABRB3-202ENST00000311550 ADAP2Q9NPF8 381 aa16.72■□□□□ 0.27
GABRB3-202ENST00000311550 ST14Q9Y5Y6 855 aa16.72■□□□□ 0.27
GABRB3-202ENST00000311550 MAP2K4P45985 399 aa16.72■□□□□ 0.27
GABRB3-202ENST00000311550 TPRG1LQ5T0D9 272 aa16.72■□□□□ 0.27
GABRB3-202ENST00000311550 MARCH8Q5T0T0 291 aa16.72■□□□□ 0.27
GABRB3-202ENST00000311550 IKBIPQ70UQ0 350 aa16.72■□□□□ 0.27
GABRB3-202ENST00000311550 SCD5Q86SK9 330 aa16.72■□□□□ 0.27
GABRB3-202ENST00000311550 UFD1Q92890 307 aa16.72■□□□□ 0.27
GABRB3-202ENST00000311550 PGAP3Q96FM1 320 aaPredicted RBP16.72■□□□□ 0.27
GABRB3-202ENST00000311550 ZNF514Q96K75 400 aaPredicted RBP16.72■□□□□ 0.27
GABRB3-202ENST00000311550 PCBD2Q9H0N5 130 aa16.72■□□□□ 0.27
GABRB3-202ENST00000311550 ZNF451Q9Y4E5 1061 aa16.72■□□□□ 0.27
GABRB3-202ENST00000311550 CLCNKAP51800 687 aa16.71■□□□□ 0.27
GABRB3-202ENST00000311550 MYBPC3Q14896 1274 aa16.71■□□□□ 0.27
GABRB3-202ENST00000311550 FUBP1Q96AE4 644 aaKnown RBP16.71■□□□□ 0.27
GABRB3-202ENST00000311550 MYO5AQ9Y4I1 1855 aaKnown RBP16.71■□□□□ 0.27
GABRB3-202ENST00000311550 GNB5O14775 395 aa16.71■□□□□ 0.27
GABRB3-202ENST00000311550 HCN1O60741 890 aa16.71■□□□□ 0.27
GABRB3-202ENST00000311550 CSTF2P33240 577 aaKnown RBP eCLIP16.71■□□□□ 0.27
GABRB3-202ENST00000311550 CMPK2Q5EBM0 449 aa16.71■□□□□ 0.27
GABRB3-202ENST00000311550 RTP2Q5QGT7 225 aa16.71■□□□□ 0.27
GABRB3-202ENST00000311550 SNAP47Q5SQN1 464 aa16.71■□□□□ 0.27
GABRB3-202ENST00000311550 TMEM236Q5W0B7 351 aa16.71■□□□□ 0.27
GABRB3-202ENST00000311550 SLC22A16Q86VW1 577 aa16.71■□□□□ 0.27
GABRB3-202ENST00000311550 RNF130Q86XS8 419 aa16.71■□□□□ 0.27
GABRB3-202ENST00000311550 ANKFN1Q8N957 763 aa16.71■□□□□ 0.27
GABRB3-202ENST00000311550 SNX33Q8WV41 574 aa16.71■□□□□ 0.27
GABRB3-202ENST00000311550 FAM92AA1XBS5 289 aa16.71■□□□□ 0.27
GABRB3-202ENST00000311550 AOC2O75106 756 aa16.71■□□□□ 0.27
GABRB3-202ENST00000311550 CPN2P22792 545 aa16.71■□□□□ 0.27
GABRB3-202ENST00000311550 RORCP51449 518 aa16.71■□□□□ 0.27
GABRB3-202ENST00000311550 IST1P53990 364 aa16.71■□□□□ 0.27
GABRB3-202ENST00000311550 KLHL35Q6PF15 583 aa16.71■□□□□ 0.27
GABRB3-202ENST00000311550 HDDC3Q8N4P3 179 aa16.71■□□□□ 0.27
GABRB3-202ENST00000311550 GSTO2Q9H4Y5 243 aa16.71■□□□□ 0.27
GABRB3-202ENST00000311550 TMEM9Q9P0T7 183 aa16.71■□□□□ 0.27
GABRB3-202ENST00000311550 SPO11Q9Y5K1 396 aa16.71■□□□□ 0.27
GABRB3-202ENST00000311550 STC2O76061 302 aa16.71■□□□□ 0.26
GABRB3-202ENST00000311550 H1F0P07305 194 aaKnown RBP16.71■□□□□ 0.26
GABRB3-202ENST00000311550 KCNA5P22460 613 aa16.71■□□□□ 0.26
GABRB3-202ENST00000311550 MVKQ03426 396 aa16.71■□□□□ 0.26
GABRB3-202ENST00000311550 C6orf141Q5SZD1 244 aa16.71■□□□□ 0.26
GABRB3-202ENST00000311550 FAM171BQ6P995 826 aa16.71■□□□□ 0.26
GABRB3-202ENST00000311550 ENPP6Q6UWR7 440 aa16.71■□□□□ 0.26
GABRB3-202ENST00000311550 L3HYPDHQ96EM0 354 aa16.71■□□□□ 0.26
GABRB3-202ENST00000311550 SLC29A1Q99808 456 aa16.71■□□□□ 0.26
GABRB3-202ENST00000311550 ITGB4P16144 1822 aa16.7■□□□□ 0.26
GABRB3-202ENST00000311550 STXBP1P61764 594 aaKnown RBP16.7■□□□□ 0.26
GABRB3-202ENST00000311550 BICRALQ6AI39 1079 aa16.7■□□□□ 0.26
GABRB3-202ENST00000311550 RELTQ969Z4 430 aa16.7■□□□□ 0.26
GABRB3-202ENST00000311550 KCNH6Q9H252 994 aa16.7■□□□□ 0.26
GABRB3-202ENST00000311550 TMEM98Q9Y2Y6 226 aa16.7■□□□□ 0.26
GABRB3-202ENST00000311550 OARD1Q9Y530 152 aa16.7■□□□□ 0.26
GABRB3-202ENST00000311550 LEFTY2O00292 366 aa16.7■□□□□ 0.26
GABRB3-202ENST00000311550 ERI3O43414 337 aaKnown RBP16.7■□□□□ 0.26
GABRB3-202ENST00000311550 ALPPP05187 535 aa16.7■□□□□ 0.26
GABRB3-202ENST00000311550 HACD2Q6Y1H2 254 aa16.7■□□□□ 0.26
GABRB3-202ENST00000311550 PEX5LQ8IYB4 626 aa16.7■□□□□ 0.26
GABRB3-202ENST00000311550 KCT2Q8NC54 265 aa16.7■□□□□ 0.26
GABRB3-202ENST00000311550 HDAC2Q92769 488 aaKnown RBP16.7■□□□□ 0.26
GABRB3-202ENST00000311550 TRPV5Q9NQA5 729 aa16.7■□□□□ 0.26
GABRB3-202ENST00000311550 CALML5Q9NZT1 146 aa16.7■□□□□ 0.26
GABRB3-202ENST00000311550 ZNF534Q76KX8 674 aa16.7■□□□□ 0.26
GABRB3-202ENST00000311550 ZFAND4Q86XD8 727 aa16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 61.3 ms