RNA–Protein interactions for RNA: ENST00000310301.8

VPS41-202, Transcript of VPS41, HOPS complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS41, Length 5,903 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-202ENST00000310301 ELFN1P0C7U0 828 aa7.97□□□□□ -1.13
VPS41-202ENST00000310301 IL7P13232 177 aa7.97□□□□□ -1.13
VPS41-202ENST00000310301 LAMP2P13473 410 aa7.97□□□□□ -1.13
VPS41-202ENST00000310301 IL7RP16871 459 aa7.97□□□□□ -1.13
VPS41-202ENST00000310301 PRKACAP17612 351 aa7.97□□□□□ -1.13
VPS41-202ENST00000310301 SSR2P43308 183 aa7.97□□□□□ -1.13
VPS41-202ENST00000310301 HSPA7P48741 367 aa7.97□□□□□ -1.13
VPS41-202ENST00000310301 PGDP52209 483 aa7.97□□□□□ -1.13
VPS41-202ENST00000310301 EIF4HQ15056 248 aaKnown RBP7.97□□□□□ -1.13
VPS41-202ENST00000310301 CADM2Q8N3J6 435 aa7.97□□□□□ -1.13
VPS41-202ENST00000310301 OR5T3Q8NGG3 340 aa7.97□□□□□ -1.13
VPS41-202ENST00000310301 NKD2Q969F2 451 aaPredicted RBP7.97□□□□□ -1.13
VPS41-202ENST00000310301 FBXL20Q96IG2 436 aa7.97□□□□□ -1.13
VPS41-202ENST00000310301 TMEM209Q96SK2 561 aa7.97□□□□□ -1.13
VPS41-202ENST00000310301 HEPHQ9BQS7 1158 aa7.97□□□□□ -1.13
VPS41-202ENST00000310301 TMED9Q9BVK6 235 aa7.97□□□□□ -1.13
VPS41-202ENST00000310301 AGO1Q9UL18 857 aaKnown RBP7.97□□□□□ -1.13
VPS41-202ENST00000310301 TMEM5Q9Y2B1 443 aa7.97□□□□□ -1.13
VPS41-202ENST00000310301 DDX60Q8IY21 1712 aaKnown RBP7.97□□□□□ -1.13
VPS41-202ENST00000310301 IGKV6-21A0A0C4DH24 114 aa7.97□□□□□ -1.13
VPS41-202ENST00000310301 EDDM13A0A1B0GTR0 161 aa7.97□□□□□ -1.13
VPS41-202ENST00000310301 MYBPHLA2RUH7 354 aa7.97□□□□□ -1.13
VPS41-202ENST00000310301 PDPK1O15530 556 aa7.97□□□□□ -1.13
VPS41-202ENST00000310301 MFSD11O43934 449 aa7.97□□□□□ -1.13
VPS41-202ENST00000310301 SCGB1D2O95969 90 aa7.97□□□□□ -1.13
VPS41-202ENST00000310301 PENKP01210 267 aaPredicted RBP7.97□□□□□ -1.13
VPS41-202ENST00000310301 PKMP14618 531 aaKnown RBP7.97□□□□□ -1.13
VPS41-202ENST00000310301 NRG3P56975 720 aa7.97□□□□□ -1.13
VPS41-202ENST00000310301 PRKCDQ05655 676 aa7.97□□□□□ -1.13
VPS41-202ENST00000310301 SP140Q13342 867 aa7.97□□□□□ -1.13
VPS41-202ENST00000310301 SCGB2B2Q4G0G5 96 aa7.97□□□□□ -1.13
VPS41-202ENST00000310301 FSTL5Q8N475 847 aaPredicted RBP7.97□□□□□ -1.13
VPS41-202ENST00000310301 C4orf32Q8N8J7 132 aa7.97□□□□□ -1.13
VPS41-202ENST00000310301 SLC43A3Q8NBI5 491 aa7.97□□□□□ -1.13
VPS41-202ENST00000310301 OR10G2Q8NGC3 310 aa7.97□□□□□ -1.13
VPS41-202ENST00000310301 OR4C6Q8NH72 309 aa7.97□□□□□ -1.13
VPS41-202ENST00000310301 FNDC8Q8TC99 324 aa7.97□□□□□ -1.13
VPS41-202ENST00000310301 KREMEN1Q96MU8 473 aa7.97□□□□□ -1.13
VPS41-202ENST00000310301 CSPG4P5Q96PW8 444 aa7.97□□□□□ -1.13
VPS41-202ENST00000310301 KCTD15Q96SI1 283 aaPredicted RBP7.97□□□□□ -1.13
VPS41-202ENST00000310301 TTYH2Q9BSA4 534 aa7.97□□□□□ -1.13
VPS41-202ENST00000310301 ZNF700Q9H0M5 742 aa7.97□□□□□ -1.13
VPS41-202ENST00000310301 IL1RAPQ9NPH3 570 aa7.97□□□□□ -1.13
VPS41-202ENST00000310301 TRAV6A0A075B6T7 132 aa7.97□□□□□ -1.13
VPS41-202ENST00000310301 ENTPD6O75354 484 aa7.97□□□□□ -1.13
VPS41-202ENST00000310301 EFNA1P20827 205 aaPredicted RBP7.97□□□□□ -1.13
VPS41-202ENST00000310301 S100A10P60903 97 aa7.97□□□□□ -1.13
VPS41-202ENST00000310301 FAM174BQ3ZCQ3 159 aa7.97□□□□□ -1.13
VPS41-202ENST00000310301 TEX44Q53QW1 395 aa7.97□□□□□ -1.13
VPS41-202ENST00000310301 DUS1LQ6P1R4 473 aaKnown RBP7.97□□□□□ -1.13
VPS41-202ENST00000310301 ZNF773Q6PK81 442 aa7.97□□□□□ -1.13
VPS41-202ENST00000310301 LRRN1Q6UXK5 716 aa7.97□□□□□ -1.13
VPS41-202ENST00000310301 SDR16C5Q8N3Y7 309 aa7.97□□□□□ -1.13
VPS41-202ENST00000310301 PLD5Q8N7P1 536 aa7.97□□□□□ -1.13
VPS41-202ENST00000310301 SLC13A3Q8WWT9 602 aa7.97□□□□□ -1.13
VPS41-202ENST00000310301 COPS8Q99627 209 aa7.97□□□□□ -1.13
VPS41-202ENST00000310301 LRRC3Q9BY71 257 aa7.97□□□□□ -1.13
VPS41-202ENST00000310301 GPSM3Q9Y4H4 160 aa7.97□□□□□ -1.13
VPS41-202ENST00000310301 TGM5O43548 720 aa7.97□□□□□ -1.13
VPS41-202ENST00000310301 ABCB7O75027 752 aa7.97□□□□□ -1.13
VPS41-202ENST00000310301 HK1P19367 917 aa7.97□□□□□ -1.13
VPS41-202ENST00000310301 F8A1P23610 371 aa7.97□□□□□ -1.13
VPS41-202ENST00000310301 HTR2BP41595 481 aa7.97□□□□□ -1.13
VPS41-202ENST00000310301 MEP1AQ16819 746 aa7.97□□□□□ -1.13
VPS41-202ENST00000310301 KLHL26Q53HC5 615 aa7.97□□□□□ -1.13
VPS41-202ENST00000310301 ZNF311Q5JNZ3 666 aa7.97□□□□□ -1.13
VPS41-202ENST00000310301 TMEM198Q66K66 360 aa7.97□□□□□ -1.13
VPS41-202ENST00000310301 KIAA1161Q6NSJ0 714 aa7.97□□□□□ -1.13
VPS41-202ENST00000310301 ADGRD2Q7Z7M1 963 aa7.97□□□□□ -1.13
VPS41-202ENST00000310301 ZBTB2Q8N680 514 aa7.97□□□□□ -1.13
VPS41-202ENST00000310301 ZSCAN1Q8NBB4 408 aa7.97□□□□□ -1.13
VPS41-202ENST00000310301 EXOSC8Q96B26 276 aaKnown RBP7.97□□□□□ -1.13
VPS41-202ENST00000310301 MFSD3Q96ES6 412 aa7.97□□□□□ -1.13
VPS41-202ENST00000310301 ZSWIM3Q96MP5 696 aa7.97□□□□□ -1.13
VPS41-202ENST00000310301 BEX2Q9BXY8 128 aa7.97□□□□□ -1.13
VPS41-202ENST00000310301 PBX4Q9BYU1 374 aa7.97□□□□□ -1.13
VPS41-202ENST00000310301 SDCBP2Q9H190 292 aa7.97□□□□□ -1.13
VPS41-202ENST00000310301 MINDY3Q9H8M7 445 aa7.97□□□□□ -1.13
VPS41-202ENST00000310301 BEX1Q9HBH7 125 aa7.97□□□□□ -1.13
VPS41-202ENST00000310301 TIGARQ9NQ88 270 aa7.97□□□□□ -1.13
VPS41-202ENST00000310301 SOHLH2Q9NX45 425 aa7.97□□□□□ -1.13
VPS41-202ENST00000310301 PAQR5Q9NXK6 330 aaPredicted RBP7.97□□□□□ -1.13
VPS41-202ENST00000310301 RNF6Q9Y252 685 aa7.97□□□□□ -1.13
VPS41-202ENST00000310301 BCORQ6W2J9 1755 aa7.97□□□□□ -1.13
VPS41-202ENST00000310301 FAM170BA6NMN3 283 aa7.96□□□□□ -1.13
VPS41-202ENST00000310301 RHPN2P1A8MT19 583 aa7.96□□□□□ -1.13
VPS41-202ENST00000310301 E9PAM4 449 aa7.96□□□□□ -1.13
VPS41-202ENST00000310301 CD2P06729 351 aa7.96□□□□□ -1.13
VPS41-202ENST00000310301 SRCP12931 536 aa7.96□□□□□ -1.13
VPS41-202ENST00000310301 PORP16435 677 aaPredicted RBP7.96□□□□□ -1.13
VPS41-202ENST00000310301 NMBRP28336 390 aa7.96□□□□□ -1.13
VPS41-202ENST00000310301 DNAJA1P31689 397 aaKnown RBP7.96□□□□□ -1.13
VPS41-202ENST00000310301 STT3AP46977 705 aa7.96□□□□□ -1.13
VPS41-202ENST00000310301 VAMP2P63027 116 aa7.96□□□□□ -1.13
VPS41-202ENST00000310301 RUNX3Q13761 415 aa7.96□□□□□ -1.13
VPS41-202ENST00000310301 ABCA11PQ4W5N1 156 aa7.96□□□□□ -1.13
VPS41-202ENST00000310301 CAPN13Q6MZZ7 669 aaPredicted RBP7.96□□□□□ -1.13
VPS41-202ENST00000310301 SNX29P2Q8IUI4 249 aa7.96□□□□□ -1.13
VPS41-202ENST00000310301 PLEKHO2Q8TD55 490 aa7.96□□□□□ -1.13
VPS41-202ENST00000310301 SLC39A3Q9BRY0 314 aa7.96□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms