RNA–Protein interactions for RNA: ENST00000309328.7

SSSCA1-201, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSSCA1, Length 698 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-201ENST00000309328 TLCD1Q96CP7 247 aa17.15■□□□□ 0.34
SSSCA1-201ENST00000309328 CUEDC1Q9NWM3 386 aaPredicted RBP17.15■□□□□ 0.34
SSSCA1-201ENST00000309328 OXSMQ9NWU1 459 aa17.15■□□□□ 0.34
SSSCA1-201ENST00000309328 PCTPQ9UKL6 214 aa17.15■□□□□ 0.34
SSSCA1-201ENST00000309328 A0A1W2PNU3 283 aaPredicted RBP17.14■□□□□ 0.33
SSSCA1-201ENST00000309328 MED19A0JLT2 244 aaPredicted RBP17.14■□□□□ 0.33
SSSCA1-201ENST00000309328 FOXO6A8MYZ6 492 aa17.14■□□□□ 0.33
SSSCA1-201ENST00000309328 IQCJ-SCHIP1C9J366 451 aaPredicted RBP17.14■□□□□ 0.33
SSSCA1-201ENST00000309328 G3V2L1 256 aa17.14■□□□□ 0.33
SSSCA1-201ENST00000309328 HAT1O14929 419 aa17.14■□□□□ 0.33
SSSCA1-201ENST00000309328 ZSCAN9O15535 394 aaPredicted RBP17.14■□□□□ 0.33
SSSCA1-201ENST00000309328 ATP8B1O43520 1251 aa17.14■□□□□ 0.33
SSSCA1-201ENST00000309328 BRINP1O60477 761 aa17.14■□□□□ 0.33
SSSCA1-201ENST00000309328 CTSVO60911 334 aa17.14■□□□□ 0.33
SSSCA1-201ENST00000309328 CPNE3O75131 537 aaKnown RBP17.14■□□□□ 0.33
SSSCA1-201ENST00000309328 OTCP00480 354 aa17.14■□□□□ 0.33
SSSCA1-201ENST00000309328 MAP7Q14244 749 aa17.14■□□□□ 0.33
SSSCA1-201ENST00000309328 GPR19Q15760 415 aa17.14■□□□□ 0.33
SSSCA1-201ENST00000309328 FAM214AQ32MH5 1076 aa17.14■□□□□ 0.33
SSSCA1-201ENST00000309328 C18orf21Q32NC0 220 aaPredicted RBP17.14■□□□□ 0.33
SSSCA1-201ENST00000309328 XKR6Q5GH73 641 aa17.14■□□□□ 0.33
SSSCA1-201ENST00000309328 LIPMQ5VYY2 423 aa17.14■□□□□ 0.33
SSSCA1-201ENST00000309328 FBXO42Q6P3S6 717 aa17.14■□□□□ 0.33
SSSCA1-201ENST00000309328 TMEM126BQ8IUX1 230 aa17.14■□□□□ 0.33
SSSCA1-201ENST00000309328 TTC29Q8NA56 475 aaPredicted RBP17.14■□□□□ 0.33
SSSCA1-201ENST00000309328 CAMKVQ8NCB2 501 aa17.14■□□□□ 0.33
SSSCA1-201ENST00000309328 ARMC2Q8NEN0 867 aa17.14■□□□□ 0.33
SSSCA1-201ENST00000309328 TRPV3Q8NET8 790 aa17.14■□□□□ 0.33
SSSCA1-201ENST00000309328 REPS1Q96D71 796 aa17.14■□□□□ 0.33
SSSCA1-201ENST00000309328 FAM111AQ96PZ2 611 aa17.14■□□□□ 0.33
SSSCA1-201ENST00000309328 OR2A5Q96R48 311 aa17.14■□□□□ 0.33
SSSCA1-201ENST00000309328 SH3GL2Q99962 352 aa17.14■□□□□ 0.33
SSSCA1-201ENST00000309328 TRMOQ9BU70 441 aa17.14■□□□□ 0.33
SSSCA1-201ENST00000309328 FAM117AQ9C073 453 aa17.14■□□□□ 0.33
SSSCA1-201ENST00000309328 IPPKQ9H8X2 491 aa17.14■□□□□ 0.33
SSSCA1-201ENST00000309328 ASCL3Q9NQ33 180 aa17.14■□□□□ 0.33
SSSCA1-201ENST00000309328 IRAK4Q9NWZ3 460 aa17.14■□□□□ 0.33
SSSCA1-201ENST00000309328 ADGRE2Q9UHX3 823 aa17.14■□□□□ 0.33
SSSCA1-201ENST00000309328 KLHL20Q9Y2M5 609 aa17.14■□□□□ 0.33
SSSCA1-201ENST00000309328 PCDHGA4Q9Y5G9 962 aa17.14■□□□□ 0.33
SSSCA1-201ENST00000309328 PTPRBP23467 1997 aa17.13■□□□□ 0.33
SSSCA1-201ENST00000309328 NCOR2Q9Y618 2525 aa17.13■□□□□ 0.33
SSSCA1-201ENST00000309328 A0A0J9YVX5 310 aa17.13■□□□□ 0.33
SSSCA1-201ENST00000309328 FITM1A5D6W6 292 aa17.13■□□□□ 0.33
SSSCA1-201ENST00000309328 TMEM8BA6NDV4 472 aa17.13■□□□□ 0.33
SSSCA1-201ENST00000309328 HMGB1P1B2RPK0 211 aaPredicted RBP17.13■□□□□ 0.33
SSSCA1-201ENST00000309328 STMND1H3BQB6 276 aa17.13■□□□□ 0.33
SSSCA1-201ENST00000309328 AGPSO00116 658 aa17.13■□□□□ 0.33
SSSCA1-201ENST00000309328 SPAG7O75391 227 aa17.13■□□□□ 0.33
SSSCA1-201ENST00000309328 WFS1O76024 890 aa17.13■□□□□ 0.33
SSSCA1-201ENST00000309328 SLC35G6P0C7Q6 338 aa17.13■□□□□ 0.33
SSSCA1-201ENST00000309328 SPINK2P20155 84 aa17.13■□□□□ 0.33
SSSCA1-201ENST00000309328 ETV5P41161 510 aa17.13■□□□□ 0.33
SSSCA1-201ENST00000309328 CCNG1P51959 295 aa17.13■□□□□ 0.33
SSSCA1-201ENST00000309328 MAGOHP61326 146 aaKnown RBP17.13■□□□□ 0.33
SSSCA1-201ENST00000309328 CHIT1Q13231 466 aa17.13■□□□□ 0.33
SSSCA1-201ENST00000309328 PWP1Q13610 501 aa17.13■□□□□ 0.33
SSSCA1-201ENST00000309328 TBC1D25Q3MII6 688 aa17.13■□□□□ 0.33
SSSCA1-201ENST00000309328 CFAP157Q5JU67 520 aa17.13■□□□□ 0.33
SSSCA1-201ENST00000309328 ZNF678Q5SXM1 525 aa17.13■□□□□ 0.33
SSSCA1-201ENST00000309328 GARNL3Q5VVW2 1013 aa17.13■□□□□ 0.33
SSSCA1-201ENST00000309328 NIPAL1Q6NVV3 410 aa17.13■□□□□ 0.33
SSSCA1-201ENST00000309328 TMIGD1Q6UXZ0 262 aa17.13■□□□□ 0.33
SSSCA1-201ENST00000309328 GOLGA7Q7Z5G4 137 aa17.13■□□□□ 0.33
SSSCA1-201ENST00000309328 MFSD9Q8NBP5 474 aa17.13■□□□□ 0.33
SSSCA1-201ENST00000309328 PROKR1Q8TCW9 393 aa17.13■□□□□ 0.33
SSSCA1-201ENST00000309328 ZNF483Q8TF39 744 aaPredicted RBP17.13■□□□□ 0.33
SSSCA1-201ENST00000309328 ATP6V1E2Q96A05 226 aa17.13■□□□□ 0.33
SSSCA1-201ENST00000309328 ESAMQ96AP7 390 aa17.13■□□□□ 0.33
SSSCA1-201ENST00000309328 ATP6V1G3Q96LB4 118 aa17.13■□□□□ 0.33
SSSCA1-201ENST00000309328 LRFN5Q96NI6 719 aa17.13■□□□□ 0.33
SSSCA1-201ENST00000309328 DPH2Q9BQC3 489 aaPredicted RBP17.13■□□□□ 0.33
SSSCA1-201ENST00000309328 NTMT1Q9BV86 223 aa17.13■□□□□ 0.33
SSSCA1-201ENST00000309328 SLC7A5P2Q9GIP4 190 aa17.13■□□□□ 0.33
SSSCA1-201ENST00000309328 DRC3Q9H069 523 aa17.13■□□□□ 0.33
SSSCA1-201ENST00000309328 ACTR8Q9H981 624 aa17.13■□□□□ 0.33
SSSCA1-201ENST00000309328 ZFP69BQ9UJL9 534 aa17.13■□□□□ 0.33
SSSCA1-201ENST00000309328 SH2B3Q9UQQ2 575 aa17.13■□□□□ 0.33
SSSCA1-201ENST00000309328 TMEM184BQ9Y519 407 aaPredicted RBP17.13■□□□□ 0.33
SSSCA1-201ENST00000309328 B3GALT1Q9Y5Z6 326 aa17.13■□□□□ 0.33
SSSCA1-201ENST00000309328 URADA6NGE7 173 aa17.12■□□□□ 0.33
SSSCA1-201ENST00000309328 C9orf172C9J069 976 aa17.12■□□□□ 0.33
SSSCA1-201ENST00000309328 BIRC5O15392 142 aa17.12■□□□□ 0.33
SSSCA1-201ENST00000309328 PRAMEF10O60809 474 aa17.12■□□□□ 0.33
SSSCA1-201ENST00000309328 TRIM13O60858 407 aa17.12■□□□□ 0.33
SSSCA1-201ENST00000309328 SCRG1O75711 98 aa17.12■□□□□ 0.33
SSSCA1-201ENST00000309328 SUPT7LO94864 414 aa17.12■□□□□ 0.33
SSSCA1-201ENST00000309328 SIX3O95343 332 aaPredicted RBP17.12■□□□□ 0.33
SSSCA1-201ENST00000309328 CLDN9O95484 217 aa17.12■□□□□ 0.33
SSSCA1-201ENST00000309328 SLC5A2P31639 672 aa17.12■□□□□ 0.33
SSSCA1-201ENST00000309328 SERPINB5P36952 375 aa17.12■□□□□ 0.33
SSSCA1-201ENST00000309328 SCTRP47872 440 aa17.12■□□□□ 0.33
SSSCA1-201ENST00000309328 SKP1P63208 163 aa17.12■□□□□ 0.33
SSSCA1-201ENST00000309328 YBX1P67809 324 aaKnown RBP17.12■□□□□ 0.33
SSSCA1-201ENST00000309328 PHEXP78562 749 aa17.12■□□□□ 0.33
SSSCA1-201ENST00000309328 LCP2Q13094 533 aa17.12■□□□□ 0.33
SSSCA1-201ENST00000309328 NDUFA9Q16795 377 aa17.12■□□□□ 0.33
SSSCA1-201ENST00000309328 GGTA1PQ4G0N0 100 aa17.12■□□□□ 0.33
SSSCA1-201ENST00000309328 FBXO48Q5FWF7 155 aa17.12■□□□□ 0.33
SSSCA1-201ENST00000309328 CATSPEREQ5SY80 951 aa17.12■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 67.8 ms