RNA–Protein interactions for RNA: ENST00000306726.6

PTPN9-201, Transcript of protein tyrosine phosphatase, non-receptor type 9, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PTPN9, Length 3,862 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN9-201ENST00000306726 CD40LGP29965 261 aa14.13□□□□□ -0.15
PTPN9-201ENST00000306726 PPM1AP35813 382 aa14.13□□□□□ -0.15
PTPN9-201ENST00000306726 PREPP48147 710 aa14.13□□□□□ -0.15
PTPN9-201ENST00000306726 ALDH6A1Q02252 535 aaKnown RBP14.13□□□□□ -0.15
PTPN9-201ENST00000306726 RUNX1T1Q06455 604 aa14.13□□□□□ -0.15
PTPN9-201ENST00000306726 DDI2Q5TDH0 399 aa14.13□□□□□ -0.15
PTPN9-201ENST00000306726 CYP2U1Q7Z449 544 aa14.13□□□□□ -0.15
PTPN9-201ENST00000306726 OR9Q1Q8NGQ5 310 aa14.13□□□□□ -0.15
PTPN9-201ENST00000306726 BADQ92934 168 aa14.13□□□□□ -0.15
PTPN9-201ENST00000306726 TRNT1Q96Q11 434 aaKnown RBP14.13□□□□□ -0.15
PTPN9-201ENST00000306726 RNF6Q9Y252 685 aa14.13□□□□□ -0.15
PTPN9-201ENST00000306726 PCDHGA10Q9Y5H3 936 aa14.13□□□□□ -0.15
PTPN9-201ENST00000306726 MROH6A6NGR9 719 aa14.13□□□□□ -0.15
PTPN9-201ENST00000306726 MANBAO00462 879 aa14.13□□□□□ -0.15
PTPN9-201ENST00000306726 ACSL4O60488 711 aa14.13□□□□□ -0.15
PTPN9-201ENST00000306726 NME6O75414 186 aaPredicted RBP14.13□□□□□ -0.15
PTPN9-201ENST00000306726 MATN4O95460 622 aa14.13□□□□□ -0.15
PTPN9-201ENST00000306726 TGFB1P01137 390 aa14.13□□□□□ -0.15
PTPN9-201ENST00000306726 ALDH2P05091 517 aa14.13□□□□□ -0.15
PTPN9-201ENST00000306726 DGKAP23743 735 aa14.13□□□□□ -0.15
PTPN9-201ENST00000306726 CAV3P56539 151 aa14.13□□□□□ -0.15
PTPN9-201ENST00000306726 ST3GAL4Q11206 333 aa14.13□□□□□ -0.15
PTPN9-201ENST00000306726 TXNDC8Q6A555 127 aa14.13□□□□□ -0.15
PTPN9-201ENST00000306726 HACD2Q6Y1H2 254 aa14.13□□□□□ -0.15
PTPN9-201ENST00000306726 SHFQ7M4L6 423 aa14.13□□□□□ -0.15
PTPN9-201ENST00000306726 DOK4Q8TEW6 326 aa14.13□□□□□ -0.15
PTPN9-201ENST00000306726 IRGQQ8WZA9 623 aa14.13□□□□□ -0.15
PTPN9-201ENST00000306726 DNASE1L2Q92874 299 aa14.13□□□□□ -0.15
PTPN9-201ENST00000306726 PPP1R2P1Q96PQ5 205 aa14.13□□□□□ -0.15
PTPN9-201ENST00000306726 NEK6Q9HC98 313 aa14.13□□□□□ -0.15
PTPN9-201ENST00000306726 M0QX08 132 aa14.12□□□□□ -0.15
PTPN9-201ENST00000306726 CLLU1OSQ5K130 101 aa14.12□□□□□ -0.15
PTPN9-201ENST00000306726 PTCHD4Q6ZW05 846 aa14.12□□□□□ -0.15
PTPN9-201ENST00000306726 CRIPAKQ8N1N5 446 aa14.12□□□□□ -0.15
PTPN9-201ENST00000306726 ZBTB2Q8N680 514 aa14.12□□□□□ -0.15
PTPN9-201ENST00000306726 CASD1Q96PB1 797 aa14.12□□□□□ -0.15
PTPN9-201ENST00000306726 UCKL1Q9NWZ5 548 aa14.12□□□□□ -0.15
PTPN9-201ENST00000306726 SARDHQ9UL12 918 aa14.12□□□□□ -0.15
PTPN9-201ENST00000306726 TNPO3Q9Y5L0 923 aaKnown RBP14.12□□□□□ -0.15
PTPN9-201ENST00000306726 CPNE3O75131 537 aaKnown RBP14.12□□□□□ -0.15
PTPN9-201ENST00000306726 PSIP1O75475 530 aaKnown RBP14.12□□□□□ -0.15
PTPN9-201ENST00000306726 LAMP1P11279 417 aa14.12□□□□□ -0.15
PTPN9-201ENST00000306726 SOX3P41225 446 aa14.12□□□□□ -0.15
PTPN9-201ENST00000306726 OR2B6P58173 313 aa14.12□□□□□ -0.15
PTPN9-201ENST00000306726 ISL1P61371 349 aa14.12□□□□□ -0.15
PTPN9-201ENST00000306726 TAF1AQ15573 450 aaPredicted RBP14.12□□□□□ -0.15
PTPN9-201ENST00000306726 PARP15Q460N3 678 aa14.12□□□□□ -0.15
PTPN9-201ENST00000306726 INO80DQ53TQ3 878 aaPredicted RBP14.12□□□□□ -0.15
PTPN9-201ENST00000306726 ARMCX6Q7L4S7 300 aa14.12□□□□□ -0.15
PTPN9-201ENST00000306726 TAS1R1Q7RTX1 841 aa14.12□□□□□ -0.15
PTPN9-201ENST00000306726 SVOPQ8N4V2 548 aa14.12□□□□□ -0.15
PTPN9-201ENST00000306726 UHRF1Q96T88 793 aaPredicted RBP14.12□□□□□ -0.15
PTPN9-201ENST00000306726 YIPF4Q9BSR8 244 aa14.12□□□□□ -0.15
PTPN9-201ENST00000306726 RLIMQ9NVW2 624 aa14.12□□□□□ -0.15
PTPN9-201ENST00000306726 TMEM248Q9NWD8 314 aa14.12□□□□□ -0.15
PTPN9-201ENST00000306726 TRPC4Q9UBN4 977 aa14.12□□□□□ -0.15
PTPN9-201ENST00000306726 FZD4Q9ULV1 537 aa14.12□□□□□ -0.15
PTPN9-201ENST00000306726 ANKDD1BA6NHY2 528 aa14.12□□□□□ -0.15
PTPN9-201ENST00000306726 SULT1C4O75897 302 aa14.12□□□□□ -0.15
PTPN9-201ENST00000306726 PEX11BO96011 259 aa14.12□□□□□ -0.15
PTPN9-201ENST00000306726 CSKP41240 450 aa14.12□□□□□ -0.15
PTPN9-201ENST00000306726 CAMK2GQ13555 558 aaPredicted RBP14.12□□□□□ -0.15
PTPN9-201ENST00000306726 COL13A1Q5TAT6 717 aaPredicted RBP14.12□□□□□ -0.15
PTPN9-201ENST00000306726 ZNF548Q8NEK5 533 aaPredicted RBP14.12□□□□□ -0.15
PTPN9-201ENST00000306726 RAB8BQ92930 207 aa14.12□□□□□ -0.15
PTPN9-201ENST00000306726 PHF21AQ96BD5 680 aa14.12□□□□□ -0.15
PTPN9-201ENST00000306726 SAMD11Q96NU1 681 aa14.12□□□□□ -0.15
PTPN9-201ENST00000306726 CCM2Q9BSQ5 444 aa14.12□□□□□ -0.15
PTPN9-201ENST00000306726 CXXC1Q9P0U4 656 aaPredicted RBP14.12□□□□□ -0.15
PTPN9-201ENST00000306726 SLC6A14Q9UN76 642 aa14.12□□□□□ -0.15
PTPN9-201ENST00000306726 WDR37Q9Y2I8 494 aa14.12□□□□□ -0.15
PTPN9-201ENST00000306726 MED16Q9Y2X0 877 aa14.12□□□□□ -0.15
PTPN9-201ENST00000306726 CFAP20Q9Y6A4 193 aaKnown RBP14.12□□□□□ -0.15
PTPN9-201ENST00000306726 GLYATL1P3A0A0U1RQE8 302 aa14.11□□□□□ -0.15
PTPN9-201ENST00000306726 MAGEB17A8MXT2 336 aa14.11□□□□□ -0.15
PTPN9-201ENST00000306726 H0YAE9 185 aa14.11□□□□□ -0.15
PTPN9-201ENST00000306726 SYN3O14994 580 aa14.11□□□□□ -0.15
PTPN9-201ENST00000306726 IL6P05231 212 aa14.11□□□□□ -0.15
PTPN9-201ENST00000306726 SLC19A1P41440 591 aa14.11□□□□□ -0.15
PTPN9-201ENST00000306726 TMPRSS11BQ86T26 416 aa14.11□□□□□ -0.15
PTPN9-201ENST00000306726 LEMD2Q8NC56 503 aa14.11□□□□□ -0.15
PTPN9-201ENST00000306726 BPIFB1Q8TDL5 484 aa14.11□□□□□ -0.15
PTPN9-201ENST00000306726 PGAP3Q96FM1 320 aaPredicted RBP14.11□□□□□ -0.15
PTPN9-201ENST00000306726 MCMBPQ9BTE3 642 aa14.11□□□□□ -0.15
PTPN9-201ENST00000306726 MS4A12Q9NXJ0 267 aa14.11□□□□□ -0.15
PTPN9-201ENST00000306726 PAQR5Q9NXK6 330 aaPredicted RBP14.11□□□□□ -0.15
PTPN9-201ENST00000306726 DNMT3LQ9UJW3 386 aa14.11□□□□□ -0.15
PTPN9-201ENST00000306726 MRPS7Q9Y2R9 242 aaKnown RBP14.11□□□□□ -0.15
PTPN9-201ENST00000306726 LRRTM2O43300 516 aa14.11□□□□□ -0.15
PTPN9-201ENST00000306726 OR10H3O60404 316 aa14.11□□□□□ -0.15
PTPN9-201ENST00000306726 ANXA4P09525 319 aaPredicted RBP14.11□□□□□ -0.15
PTPN9-201ENST00000306726 ETFAP13804 333 aa14.11□□□□□ -0.15
PTPN9-201ENST00000306726 OGNP20774 298 aaKnown RBP14.11□□□□□ -0.15
PTPN9-201ENST00000306726 CLK3P49761 638 aaKnown RBP14.11□□□□□ -0.15
PTPN9-201ENST00000306726 ZNF135P52742 658 aaPredicted RBP14.11□□□□□ -0.15
PTPN9-201ENST00000306726 ZFP69Q49AA0 526 aa14.11□□□□□ -0.15
PTPN9-201ENST00000306726 EIF3MQ7L2H7 374 aaKnown RBP14.11□□□□□ -0.15
PTPN9-201ENST00000306726 C1orf52Q8N6N3 182 aaKnown RBP14.11□□□□□ -0.15
PTPN9-201ENST00000306726 SCAIQ8N9R8 606 aa14.11□□□□□ -0.15
PTPN9-201ENST00000306726 RHEBL1Q8TAI7 183 aa14.11□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms