RNA–Protein interactions for RNA: ENST00000303538.12

PDS5A-201, Transcript of PDS5 cohesin associated factor A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDS5A, Length 7,176 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDS5A-201ENST00000303538 TMEM17Q86X19 198 aa16.3■□□□□ 0.2
PDS5A-201ENST00000303538 SPATA7Q9P0W8 599 aa16.3■□□□□ 0.2
PDS5A-201ENST00000303538 A6NLC8 198 aa16.3■□□□□ 0.2
PDS5A-201ENST00000303538 PGLSO95336 258 aa16.3■□□□□ 0.2
PDS5A-201ENST00000303538 GRIK2Q13002 908 aa16.3■□□□□ 0.2
PDS5A-201ENST00000303538 SPOCK2Q92563 424 aa16.3■□□□□ 0.2
PDS5A-201ENST00000303538 USB1Q9BQ65 265 aaKnown RBP16.3■□□□□ 0.2
PDS5A-201ENST00000303538 TTYH1Q9H313 450 aaPredicted RBP16.3■□□□□ 0.2
PDS5A-201ENST00000303538 SPIN1Q9Y657 262 aaPredicted RBP16.3■□□□□ 0.2
PDS5A-201ENST00000303538 NUAK1O60285 661 aa16.3■□□□□ 0.2
PDS5A-201ENST00000303538 VEGFBP49765 207 aa16.3■□□□□ 0.2
PDS5A-201ENST00000303538 CORO1CQ9ULV4 474 aaPredicted RBP16.3■□□□□ 0.2
PDS5A-201ENST00000303538 BHMG1C9JSJ3 638 aaPredicted RBP16.3■□□□□ 0.2
PDS5A-201ENST00000303538 VILLO15195 856 aa16.3■□□□□ 0.2
PDS5A-201ENST00000303538 OTX2P32243 289 aa16.3■□□□□ 0.2
PDS5A-201ENST00000303538 SLC11A1P49279 550 aa16.3■□□□□ 0.2
PDS5A-201ENST00000303538 S100A10P60903 97 aa16.3■□□□□ 0.2
PDS5A-201ENST00000303538 RBM48Q5RL73 367 aaKnown RBP16.3■□□□□ 0.2
PDS5A-201ENST00000303538 THOC6Q86W42 341 aaKnown RBP16.3■□□□□ 0.2
PDS5A-201ENST00000303538 GALNT11Q8NCW6 608 aa16.3■□□□□ 0.2
PDS5A-201ENST00000303538 NPLOC4Q8TAT6 608 aa16.3■□□□□ 0.2
PDS5A-201ENST00000303538 CNDP2Q96KP4 475 aaKnown RBP16.3■□□□□ 0.2
PDS5A-201ENST00000303538 WDR12Q9GZL7 423 aaKnown RBP16.3■□□□□ 0.2
PDS5A-201ENST00000303538 POLR2J2Q9GZM3 115 aaKnown RBP16.29■□□□□ 0.2
PDS5A-201ENST00000303538 SMPD3Q9NY59 655 aaPredicted RBP16.29■□□□□ 0.2
PDS5A-201ENST00000303538 MEMO1Q9Y316 297 aa16.29■□□□□ 0.2
PDS5A-201ENST00000303538 USP32Q8NFA0 1604 aa16.29■□□□□ 0.2
PDS5A-201ENST00000303538 LEFTY2O00292 366 aa16.29■□□□□ 0.2
PDS5A-201ENST00000303538 OGFRL1Q5TC84 451 aaPredicted RBP16.29■□□□□ 0.2
PDS5A-201ENST00000303538 DENND1AQ8TEH3 1009 aa16.29■□□□□ 0.2
PDS5A-201ENST00000303538 SP140LQ9H930 580 aa16.29■□□□□ 0.2
PDS5A-201ENST00000303538 FARSAQ9Y285 508 aaKnown RBP16.29■□□□□ 0.2
PDS5A-201ENST00000303538 PDE4DIPQ5VU43 2346 aa16.29■□□□□ 0.2
PDS5A-201ENST00000303538 hCG_1807616A0A1W2PRN6 198 aa16.29■□□□□ 0.2
PDS5A-201ENST00000303538 H3BUI4 141 aa16.29■□□□□ 0.2
PDS5A-201ENST00000303538 CCNKO75909 580 aa16.29■□□□□ 0.2
PDS5A-201ENST00000303538 SCELO95171 688 aa16.29■□□□□ 0.2
PDS5A-201ENST00000303538 RBM15BQ8NDT2 890 aaKnown RBP16.29■□□□□ 0.2
PDS5A-201ENST00000303538 P2RY13Q9BPV8 354 aa16.29■□□□□ 0.2
PDS5A-201ENST00000303538 TMED9Q9BVK6 235 aa16.29■□□□□ 0.2
PDS5A-201ENST00000303538 ITM2CQ9NQX7 267 aa16.29■□□□□ 0.2
PDS5A-201ENST00000303538 DTLQ9NZJ0 730 aa16.29■□□□□ 0.2
PDS5A-201ENST00000303538 GPR34Q9UPC5 381 aa16.29■□□□□ 0.2
PDS5A-201ENST00000303538 NPIPA2E9PIF3 369 aa16.29■□□□□ 0.2
PDS5A-201ENST00000303538 NPIPA3F8WFD2 350 aa16.29■□□□□ 0.2
PDS5A-201ENST00000303538 GRID2O43424 1007 aa16.29■□□□□ 0.2
PDS5A-201ENST00000303538 GSTT2BP0CG30 244 aa16.29■□□□□ 0.2
PDS5A-201ENST00000303538 CSF2RAP15509 400 aa16.29■□□□□ 0.2
PDS5A-201ENST00000303538 BMP6P22004 513 aa16.29■□□□□ 0.2
PDS5A-201ENST00000303538 RAB43Q86YS6 212 aa16.29■□□□□ 0.2
PDS5A-201ENST00000303538 APOBEC3GQ9HC16 384 aaKnown RBP16.29■□□□□ 0.2
PDS5A-201ENST00000303538 KCNS2Q9ULS6 477 aa16.29■□□□□ 0.2
PDS5A-201ENST00000303538 A0A1W2PP55 124 aa16.29■□□□□ 0.2
PDS5A-201ENST00000303538 SIX3O95343 332 aaPredicted RBP16.29■□□□□ 0.2
PDS5A-201ENST00000303538 ENGP17813 658 aa16.29■□□□□ 0.2
PDS5A-201ENST00000303538 DUSP3P51452 185 aaPredicted RBP16.29■□□□□ 0.2
PDS5A-201ENST00000303538 CTBP2P56545 445 aa16.29■□□□□ 0.2
PDS5A-201ENST00000303538 XIAPP98170 497 aa16.29■□□□□ 0.2
PDS5A-201ENST00000303538 ELOCQ15369 112 aa16.29■□□□□ 0.2
PDS5A-201ENST00000303538 KLHL22Q53GT1 634 aa16.29■□□□□ 0.2
PDS5A-201ENST00000303538 ARL9Q6T311 187 aa16.29■□□□□ 0.2
PDS5A-201ENST00000303538 OR8H1Q8NGG4 311 aa16.29■□□□□ 0.2
PDS5A-201ENST00000303538 TNFRSF25Q93038 417 aa16.29■□□□□ 0.2
PDS5A-201ENST00000303538 S100A14Q9HCY8 104 aa16.29■□□□□ 0.2
PDS5A-201ENST00000303538 GNG8Q9UK08 70 aa16.29■□□□□ 0.2
PDS5A-201ENST00000303538 DEPDC5O75140 1603 aa16.29■□□□□ 0.2
PDS5A-201ENST00000303538 SCO2O43819 266 aa16.28■□□□□ 0.2
PDS5A-201ENST00000303538 NNATQ16517 81 aa16.28■□□□□ 0.2
PDS5A-201ENST00000303538 ZFP69Q49AA0 526 aa16.28■□□□□ 0.2
PDS5A-201ENST00000303538 PDCD4Q53EL6 469 aaKnown RBP16.28■□□□□ 0.2
PDS5A-201ENST00000303538 C1orf189Q5VU69 101 aa16.28■□□□□ 0.2
PDS5A-201ENST00000303538 GRHPRQ9UBQ7 328 aa16.28■□□□□ 0.2
PDS5A-201ENST00000303538 KCNJ13O60928 360 aa16.28■□□□□ 0.2
PDS5A-201ENST00000303538 DNAJA1P31689 397 aaKnown RBP16.28■□□□□ 0.2
PDS5A-201ENST00000303538 RPL19P84098 196 aaKnown RBP16.28■□□□□ 0.2
PDS5A-201ENST00000303538 SGCAQ16586 387 aa16.28■□□□□ 0.2
PDS5A-201ENST00000303538 OR4F3Q6IEY1 312 aa16.28■□□□□ 0.2
PDS5A-201ENST00000303538 CLDN19Q8N6F1 224 aa16.28■□□□□ 0.2
PDS5A-201ENST00000303538 PCDH19Q8TAB3 1148 aa16.28■□□□□ 0.2
PDS5A-201ENST00000303538 CCDC28BQ9BUN5 200 aa16.28■□□□□ 0.2
PDS5A-201ENST00000303538 OR51B5Q9H339 312 aa16.28■□□□□ 0.2
PDS5A-201ENST00000303538 XKR8Q9H6D3 395 aa16.28■□□□□ 0.2
PDS5A-201ENST00000303538 AGPSO00116 658 aa16.28■□□□□ 0.2
PDS5A-201ENST00000303538 SLC7A4O43246 635 aa16.28■□□□□ 0.2
PDS5A-201ENST00000303538 AHSA1O95433 338 aa16.28■□□□□ 0.2
PDS5A-201ENST00000303538 GGT5P36269 586 aa16.28■□□□□ 0.2
PDS5A-201ENST00000303538 ATXN7L1Q9ULK2 861 aaPredicted RBP16.28■□□□□ 0.2
PDS5A-201ENST00000303538 INSL5Q9Y5Q6 135 aa16.28■□□□□ 0.2
PDS5A-201ENST00000303538 ITGA10O75578 1167 aa16.28■□□□□ 0.2
PDS5A-201ENST00000303538 GDF5P43026 501 aa16.28■□□□□ 0.2
PDS5A-201ENST00000303538 SNU13P55769 128 aaKnown RBP16.28■□□□□ 0.2
PDS5A-201ENST00000303538 MEF2AQ02078 507 aaPredicted RBP16.28■□□□□ 0.2
PDS5A-201ENST00000303538 ST3GAL4Q11206 333 aa16.28■□□□□ 0.2
PDS5A-201ENST00000303538 PON2Q15165 354 aa16.28■□□□□ 0.2
PDS5A-201ENST00000303538 SUSD3Q96L08 255 aa16.28■□□□□ 0.2
PDS5A-201ENST00000303538 TMEM121BQ9BXQ6 578 aaPredicted RBP16.28■□□□□ 0.2
PDS5A-201ENST00000303538 RC3H2Q9HBD1 1191 aaKnown RBP16.28■□□□□ 0.2
PDS5A-201ENST00000303538 CYTH4Q9UIA0 394 aa16.28■□□□□ 0.2
PDS5A-201ENST00000303538 FABP12A6NFH5 140 aa16.28■□□□□ 0.2
PDS5A-201ENST00000303538 H3BQ06 376 aaPredicted RBP16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms