RNA–Protein interactions for RNA: ENST00000301843.12

CTTN-201, Transcript of cortactin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CTTN, Length 3,272 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTTN-201ENST00000301843 OR4K1Q8NGD4 311 aa13.11□□□□□ -0.31
CTTN-201ENST00000301843 OR9Q2Q8NGE9 314 aa13.11□□□□□ -0.31
CTTN-201ENST00000301843 S100ZQ8WXG8 99 aa13.11□□□□□ -0.31
CTTN-201ENST00000301843 GTPBP3Q969Y2 492 aaKnown RBP13.11□□□□□ -0.31
CTTN-201ENST00000301843 COPS8Q99627 209 aa13.11□□□□□ -0.31
CTTN-201ENST00000301843 NDRG4Q9ULP0 352 aaKnown RBP13.11□□□□□ -0.31
CTTN-201ENST00000301843 PCDHGA6Q9Y5G7 932 aa13.11□□□□□ -0.31
CTTN-201ENST00000301843 OR2A25A4D2G3 310 aa13.1□□□□□ -0.31
CTTN-201ENST00000301843 OR2AG2A6NM03 316 aa13.1□□□□□ -0.31
CTTN-201ENST00000301843 H7C0S8 307 aa13.1□□□□□ -0.31
CTTN-201ENST00000301843 GFRA2O00451 464 aa13.1□□□□□ -0.31
CTTN-201ENST00000301843 FZD6O60353 706 aa13.1□□□□□ -0.31
CTTN-201ENST00000301843 PRKAR2AP13861 404 aaKnown RBP13.1□□□□□ -0.31
CTTN-201ENST00000301843 ACVR2AP27037 513 aa13.1□□□□□ -0.31
CTTN-201ENST00000301843 PCYT1AP49585 367 aa13.1□□□□□ -0.31
CTTN-201ENST00000301843 GANABQ14697 944 aaKnown RBP13.1□□□□□ -0.31
CTTN-201ENST00000301843 CCSMST1Q4G0I0 132 aa13.1□□□□□ -0.31
CTTN-201ENST00000301843 DESI1Q6ICB0 168 aa13.1□□□□□ -0.31
CTTN-201ENST00000301843 OR5AK3PQ8NH89 298 aa13.1□□□□□ -0.31
CTTN-201ENST00000301843 RHOXF1Q8NHV9 184 aa13.1□□□□□ -0.31
CTTN-201ENST00000301843 DOCK6Q96HP0 2047 aa13.1□□□□□ -0.31
CTTN-201ENST00000301843 NTMT1Q9BV86 223 aa13.1□□□□□ -0.31
CTTN-201ENST00000301843 TM9SF3Q9HD45 589 aa13.1□□□□□ -0.31
CTTN-201ENST00000301843 NECTIN3Q9NQS3 549 aa13.1□□□□□ -0.31
CTTN-201ENST00000301843 SH3BP4Q9P0V3 963 aa13.1□□□□□ -0.31
CTTN-201ENST00000301843 MAGEB17A8MXT2 336 aa13.1□□□□□ -0.31
CTTN-201ENST00000301843 WNT9AO14904 365 aa13.1□□□□□ -0.31
CTTN-201ENST00000301843 SNPHO15079 494 aa13.1□□□□□ -0.31
CTTN-201ENST00000301843 PCDH7O60245 1069 aa13.1□□□□□ -0.31
CTTN-201ENST00000301843 EPN2O95208 641 aa13.1□□□□□ -0.31
CTTN-201ENST00000301843 ETHE1O95571 254 aa13.1□□□□□ -0.31
CTTN-201ENST00000301843 PTHP01270 115 aa13.1□□□□□ -0.31
CTTN-201ENST00000301843 ADRA2AP08913 450 aa13.1□□□□□ -0.31
CTTN-201ENST00000301843 GJA1P17302 382 aa13.1□□□□□ -0.31
CTTN-201ENST00000301843 FPR1P21462 350 aa13.1□□□□□ -0.31
CTTN-201ENST00000301843 POU1F1P28069 291 aa13.1□□□□□ -0.31
CTTN-201ENST00000301843 EIF2DP41214 584 aaKnown RBP13.1□□□□□ -0.31
CTTN-201ENST00000301843 TGM4P49221 684 aa13.1□□□□□ -0.31
CTTN-201ENST00000301843 ABRQ12979 859 aa13.1□□□□□ -0.31
CTTN-201ENST00000301843 COL9A2Q14055 689 aaPredicted RBP13.1□□□□□ -0.31
CTTN-201ENST00000301843 LRIF1Q5T3J3 769 aa13.1□□□□□ -0.31
CTTN-201ENST00000301843 AGAP7PQ5VUJ5 663 aa13.1□□□□□ -0.31
CTTN-201ENST00000301843 ARMC8Q8IUR7 673 aa13.1□□□□□ -0.31
CTTN-201ENST00000301843 SLC5A8Q8N695 610 aa13.1□□□□□ -0.31
CTTN-201ENST00000301843 PCSK9Q8NBP7 692 aaKnown RBP13.1□□□□□ -0.31
CTTN-201ENST00000301843 SCAMP4Q969E2 229 aa13.1□□□□□ -0.31
CTTN-201ENST00000301843 NIPSNAP1Q9BPW8 284 aa13.1□□□□□ -0.31
CTTN-201ENST00000301843 SLC32A1Q9H598 525 aa13.1□□□□□ -0.31
CTTN-201ENST00000301843 ERVK13-1Q9NX77 482 aa13.1□□□□□ -0.31
CTTN-201ENST00000301843 TRPS1Q9UHF7 1281 aa13.1□□□□□ -0.31
CTTN-201ENST00000301843 OGDHLQ9ULD0 1010 aa13.1□□□□□ -0.31
CTTN-201ENST00000301843 SMIM30A4D0T7 59 aa13.1□□□□□ -0.31
CTTN-201ENST00000301843 TMEM202A6NGA9 273 aa13.1□□□□□ -0.31
CTTN-201ENST00000301843 OR6C75A6NL08 312 aa13.1□□□□□ -0.31
CTTN-201ENST00000301843 TBKBP1A7MCY6 615 aa13.1□□□□□ -0.31
CTTN-201ENST00000301843 TRBC1P01850 177 aa13.1□□□□□ -0.31
CTTN-201ENST00000301843 CD22P20273 847 aa13.1□□□□□ -0.31
CTTN-201ENST00000301843 CDH12P55289 794 aa13.1□□□□□ -0.31
CTTN-201ENST00000301843 RAB15P59190 212 aa13.1□□□□□ -0.31
CTTN-201ENST00000301843 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP13.1□□□□□ -0.31
CTTN-201ENST00000301843 NAGSQ8N159 534 aa13.1□□□□□ -0.31
CTTN-201ENST00000301843 NXPE1Q8N323 547 aa13.1□□□□□ -0.31
CTTN-201ENST00000301843 NELL1Q92832 810 aa13.1□□□□□ -0.31
CTTN-201ENST00000301843 XRN2Q9H0D6 950 aaKnown RBP eCLIP13.1□□□□□ -0.314e-11■■■■□ 26.7
CTTN-201ENST00000301843 SMG9Q9H0W8 520 aaKnown RBP13.1□□□□□ -0.31
CTTN-201ENST00000301843 MAGIXQ9H6Y5 334 aa13.1□□□□□ -0.31
CTTN-201ENST00000301843 FZD4Q9ULV1 537 aa13.1□□□□□ -0.31
CTTN-201ENST00000301843 SNX6Q9UNH7 406 aa13.1□□□□□ -0.31
CTTN-201ENST00000301843 AP3D1O14617 1153 aa13.09□□□□□ -0.31
CTTN-201ENST00000301843 GAB1Q13480 694 aa13.09□□□□□ -0.31
CTTN-201ENST00000301843 RFX4Q33E94 735 aa13.09□□□□□ -0.31
CTTN-201ENST00000301843 ZNF404Q494X3 552 aa13.09□□□□□ -0.31
CTTN-201ENST00000301843 COX20Q5RI15 118 aa13.09□□□□□ -0.31
CTTN-201ENST00000301843 EHD1Q9H4M9 534 aa13.09□□□□□ -0.31
CTTN-201ENST00000301843 TPT1P8Q9HAU6 139 aa13.09□□□□□ -0.31
CTTN-201ENST00000301843 FBXO8Q9NRD0 319 aa13.09□□□□□ -0.31
CTTN-201ENST00000301843 M0QX08 132 aa13.09□□□□□ -0.31
CTTN-201ENST00000301843 RFXAPO00287 272 aa13.09□□□□□ -0.31
CTTN-201ENST00000301843 DSCR3O14972 297 aa13.09□□□□□ -0.31
CTTN-201ENST00000301843 JUNDP17535 347 aa13.09□□□□□ -0.31
CTTN-201ENST00000301843 AMD1P17707 334 aa13.09□□□□□ -0.31
CTTN-201ENST00000301843 AZGP1P25311 298 aaKnown RBP13.09□□□□□ -0.31
CTTN-201ENST00000301843 CRATP43155 626 aa13.09□□□□□ -0.31
CTTN-201ENST00000301843 MAGEA2P43356 314 aa13.09□□□□□ -0.31
CTTN-201ENST00000301843 WNT3P56703 355 aa13.09□□□□□ -0.31
CTTN-201ENST00000301843 TCTN1Q2MV58 587 aa13.09□□□□□ -0.31
CTTN-201ENST00000301843 DGKKQ5KSL6 1271 aa13.09□□□□□ -0.31
CTTN-201ENST00000301843 CERS6Q6ZMG9 384 aa13.09□□□□□ -0.31
CTTN-201ENST00000301843 FBLIM1Q8WUP2 373 aa13.09□□□□□ -0.31
CTTN-201ENST00000301843 SAMD11Q96NU1 681 aa13.09□□□□□ -0.31
CTTN-201ENST00000301843 ITPAQ9BY32 194 aa13.09□□□□□ -0.31
CTTN-201ENST00000301843 OSGIN1Q9UJX0 560 aa13.09□□□□□ -0.31
CTTN-201ENST00000301843 HMGA1P17096 107 aaKnown RBP13.08□□□□□ -0.31
CTTN-201ENST00000301843 AOAHP28039 575 aa13.08□□□□□ -0.31
CTTN-201ENST00000301843 CA8P35219 290 aa13.08□□□□□ -0.31
CTTN-201ENST00000301843 PPP5CP53041 499 aa13.08□□□□□ -0.31
CTTN-201ENST00000301843 XKR6Q5GH73 641 aa13.08□□□□□ -0.31
CTTN-201ENST00000301843 TPRG1LQ5T0D9 272 aa13.08□□□□□ -0.31
CTTN-201ENST00000301843 SPATA17Q96L03 361 aa13.08□□□□□ -0.31
CTTN-201ENST00000301843 OR5M11Q96RB7 305 aa13.08□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms