RNA–Protein interactions for RNA: ENST00000296946.6

T-201, Transcript of Brachyury protein, humanhuman

APPRIS P1 TSL 5 BASIC

Gene T, Length 2,436 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
T-201ENST00000296946 IL2P60568 153 aa17.54■□□□□ 0.4
T-201ENST00000296946 CHRNEQ04844 493 aa17.54■□□□□ 0.4
T-201ENST00000296946 ZFP69Q49AA0 526 aa17.54■□□□□ 0.4
T-201ENST00000296946 TCEAL5Q5H9L2 206 aa17.54■□□□□ 0.4
T-201ENST00000296946 SIMC1Q8NDZ2 872 aa17.54■□□□□ 0.4
T-201ENST00000296946 PYCR2Q96C36 320 aa17.54■□□□□ 0.4
T-201ENST00000296946 SIGLEC11Q96RL6 698 aa17.54■□□□□ 0.4
T-201ENST00000296946 RHNO1Q9BSD3 238 aa17.54■□□□□ 0.4
T-201ENST00000296946 ALX3O95076 343 aa17.53■□□□□ 0.4
T-201ENST00000296946 HOXA9P31269 272 aa17.53■□□□□ 0.4
T-201ENST00000296946 HTR3AP46098 478 aa17.53■□□□□ 0.4
T-201ENST00000296946 HTR6P50406 440 aa17.53■□□□□ 0.4
T-201ENST00000296946 HYAL1Q12794 435 aa17.53■□□□□ 0.4
T-201ENST00000296946 GTF2H3Q13889 308 aa17.53■□□□□ 0.4
T-201ENST00000296946 CDK10Q15131 360 aa17.53■□□□□ 0.4
T-201ENST00000296946 ATAD3CQ5T2N8 411 aa17.53■□□□□ 0.4
T-201ENST00000296946 SLC22A15Q8IZD6 547 aa17.53■□□□□ 0.4
T-201ENST00000296946 NUDT8Q8WV74 236 aa17.53■□□□□ 0.4
T-201ENST00000296946 DEPDC7Q96QD5 511 aa17.53■□□□□ 0.4
T-201ENST00000296946 CDADC1Q9BWV3 514 aa17.53■□□□□ 0.4
T-201ENST00000296946 LMAN2LQ9H0V9 348 aa17.53■□□□□ 0.4
T-201ENST00000296946 TRMT6Q9UJA5 497 aaKnown RBP17.53■□□□□ 0.4
T-201ENST00000296946 GRIP1Q9Y3R0 1128 aa17.53■□□□□ 0.4
T-201ENST00000296946 OBSL1O75147 1896 aa17.53■□□□□ 0.4
T-201ENST00000296946 RGS14O43566 566 aa17.53■□□□□ 0.4
T-201ENST00000296946 ACSL4O60488 711 aa17.53■□□□□ 0.4
T-201ENST00000296946 FPR1P21462 350 aa17.53■□□□□ 0.4
T-201ENST00000296946 AAK1Q2M2I8 961 aa17.53■□□□□ 0.4
T-201ENST00000296946 PRSS36Q5K4E3 855 aa17.53■□□□□ 0.4
T-201ENST00000296946 CACHD1Q5VU97 1274 aa17.53■□□□□ 0.4
T-201ENST00000296946 AFTPHQ6ULP2 937 aa17.53■□□□□ 0.4
T-201ENST00000296946 CALHM3Q86XJ0 350 aa17.53■□□□□ 0.4
T-201ENST00000296946 P3H2Q8IVL5 708 aa17.53■□□□□ 0.4
T-201ENST00000296946 MSRB3Q8IXL7 192 aa17.53■□□□□ 0.4
T-201ENST00000296946 CELF2-AS1Q8N7Q2 184 aa17.53■□□□□ 0.4
T-201ENST00000296946 MYDGFQ969H8 173 aa17.53■□□□□ 0.4
T-201ENST00000296946 TRIM63Q969Q1 353 aa17.53■□□□□ 0.4
T-201ENST00000296946 MIR1-1HGQ9H1L0 117 aa17.53■□□□□ 0.4
T-201ENST00000296946 KIF17Q9P2E2 1029 aa17.53■□□□□ 0.4
T-201ENST00000296946 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP17.53■□□□□ 0.4
T-201ENST00000296946 BRWD1Q9NSI6 2320 aa17.53■□□□□ 0.4
T-201ENST00000296946 MYO1GB0I1T2 1018 aa17.52■□□□□ 0.4
T-201ENST00000296946 ERN1O75460 977 aaKnown RBP17.52■□□□□ 0.4
T-201ENST00000296946 HNRNPA1P09651 372 aaKnown RBP eCLIP17.52■□□□□ 0.4
T-201ENST00000296946 RHOQP17081 205 aa17.52■□□□□ 0.4
T-201ENST00000296946 TACR2P21452 398 aa17.52■□□□□ 0.4
T-201ENST00000296946 GADD45AP24522 165 aa17.52■□□□□ 0.4
T-201ENST00000296946 ETV6P41212 452 aa17.52■□□□□ 0.4
T-201ENST00000296946 HK3P52790 923 aa17.52■□□□□ 0.4
T-201ENST00000296946 RPS24P62847 133 aaKnown RBP17.52■□□□□ 0.4
T-201ENST00000296946 RPL38P63173 70 aaKnown RBP17.52■□□□□ 0.4
T-201ENST00000296946 TBCEQ15813 527 aaPredicted RBP17.52■□□□□ 0.4
T-201ENST00000296946 TIGD6Q17RP2 521 aa17.52■□□□□ 0.4
T-201ENST00000296946 CARD16Q5EG05 197 aa17.52■□□□□ 0.4
T-201ENST00000296946 UBQLNLQ8IYU4 475 aa17.52■□□□□ 0.4
T-201ENST00000296946 RPRD1AQ96P16 312 aaPredicted RBP17.52■□□□□ 0.4
T-201ENST00000296946 COPS4Q9BT78 406 aa17.52■□□□□ 0.4
T-201ENST00000296946 CCDC32Q9BV29 185 aa17.52■□□□□ 0.4
T-201ENST00000296946 TTYH1Q9H313 450 aaPredicted RBP17.52■□□□□ 0.4
T-201ENST00000296946 RASSF1Q9NS23 344 aa17.52■□□□□ 0.4
T-201ENST00000296946 KRT84Q9NSB2 600 aa17.52■□□□□ 0.4
T-201ENST00000296946 VNN3Q9NY84 501 aa17.52■□□□□ 0.4
T-201ENST00000296946 NUDT4Q9NZJ9 180 aa17.52■□□□□ 0.4
T-201ENST00000296946 DSCR3O14972 297 aa17.52■□□□□ 0.4
T-201ENST00000296946 TSPAN3O60637 253 aa17.52■□□□□ 0.4
T-201ENST00000296946 CCNDBP1O95273 360 aa17.52■□□□□ 0.4
T-201ENST00000296946 OTCP00480 354 aa17.52■□□□□ 0.4
T-201ENST00000296946 CEBPBP17676 345 aa17.52■□□□□ 0.4
T-201ENST00000296946 SOX6P35712 828 aa17.52■□□□□ 0.4
T-201ENST00000296946 PTPRNQ16849 979 aa17.52■□□□□ 0.4
T-201ENST00000296946 FBXO43Q4G163 708 aa17.52■□□□□ 0.4
T-201ENST00000296946 CARNMT1Q8N4J0 409 aa17.52■□□□□ 0.4
T-201ENST00000296946 OR4F6Q8NGB9 312 aa17.52■□□□□ 0.4
T-201ENST00000296946 SMG7Q92540 1137 aaKnown RBP17.52■□□□□ 0.4
T-201ENST00000296946 BHMTQ93088 406 aa17.52■□□□□ 0.4
T-201ENST00000296946 OR52E6Q96RD3 313 aa17.52■□□□□ 0.4
T-201ENST00000296946 HBEGFQ99075 208 aa17.52■□□□□ 0.4
T-201ENST00000296946 SEMA3CQ99985 751 aa17.52■□□□□ 0.4
T-201ENST00000296946 POLR1EQ9GZS1 481 aaKnown RBP17.52■□□□□ 0.4
T-201ENST00000296946 IL1RAPQ9NPH3 570 aa17.52■□□□□ 0.4
T-201ENST00000296946 NLE1Q9NVX2 485 aaPredicted RBP17.52■□□□□ 0.4
T-201ENST00000296946 CARD8Q9Y2G2 431 aa17.52■□□□□ 0.4
T-201ENST00000296946 ASB1Q9Y576 335 aa17.52■□□□□ 0.4
T-201ENST00000296946 PCDHGA3Q9Y5H0 932 aa17.52■□□□□ 0.4
T-201ENST00000296946 PRAMEF12O95522 483 aa17.51■□□□□ 0.39
T-201ENST00000296946 CD9P21926 228 aa17.51■□□□□ 0.39
T-201ENST00000296946 PTGR1Q14914 329 aa17.51■□□□□ 0.39
T-201ENST00000296946 ABRAXAS2Q15018 415 aa17.51■□□□□ 0.39
T-201ENST00000296946 PCBP2Q15366 365 aaKnown RBP eCLIP17.51■□□□□ 0.39
T-201ENST00000296946 SPANXN4Q5MJ08 99 aa17.51■□□□□ 0.39
T-201ENST00000296946 CEP68Q76N32 757 aa17.51■□□□□ 0.39
T-201ENST00000296946 PHACTR4Q8IZ21 702 aa17.51■□□□□ 0.39
T-201ENST00000296946 TMEM132CQ8N3T6 1108 aa17.51■□□□□ 0.39
T-201ENST00000296946 PLD4Q96BZ4 506 aa17.51■□□□□ 0.39
T-201ENST00000296946 LINGO1Q96FE5 620 aa17.51■□□□□ 0.39
T-201ENST00000296946 ZYG11BQ9C0D3 744 aa17.51■□□□□ 0.39
T-201ENST00000296946 PDP1Q9P0J1 537 aaPredicted RBP17.51■□□□□ 0.39
T-201ENST00000296946 COLQQ9Y215 455 aaPredicted RBP17.51■□□□□ 0.39
T-201ENST00000296946 CAB39Q9Y376 341 aaPredicted RBP17.51■□□□□ 0.39
T-201ENST00000296946 LYVE1Q9Y5Y7 322 aa17.51■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms