RNA–Protein interactions for RNA: ENST00000296861.2

TNFRSF21-201, Transcript of TNF receptor superfamily member 21, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF21, Length 3,595 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF21-201ENST00000296861 C5orf58C9J3I9 102 aa12.9□□□□□ -0.34
TNFRSF21-201ENST00000296861 ERN1O75460 977 aaKnown RBP12.9□□□□□ -0.34
TNFRSF21-201ENST00000296861 STC2O76061 302 aa12.9□□□□□ -0.34
TNFRSF21-201ENST00000296861 GSTM1P09488 218 aa12.9□□□□□ -0.34
TNFRSF21-201ENST00000296861 ETFAP13804 333 aa12.9□□□□□ -0.34
TNFRSF21-201ENST00000296861 INPP1P49441 399 aa12.9□□□□□ -0.34
TNFRSF21-201ENST00000296861 CRISP3P54108 245 aa12.9□□□□□ -0.34
TNFRSF21-201ENST00000296861 ADGRF1Q5T601 910 aa12.9□□□□□ -0.34
TNFRSF21-201ENST00000296861 CPTPQ5TA50 214 aa12.9□□□□□ -0.34
TNFRSF21-201ENST00000296861 LRRC66Q68CR7 880 aa12.9□□□□□ -0.34
TNFRSF21-201ENST00000296861 TNFAIP8L2Q6P589 184 aaPredicted RBP12.9□□□□□ -0.34
TNFRSF21-201ENST00000296861 KLHL17Q6TDP4 642 aa12.9□□□□□ -0.34
TNFRSF21-201ENST00000296861 PTCHD4Q6ZW05 846 aa12.9□□□□□ -0.34
TNFRSF21-201ENST00000296861 GET4Q7L5D6 327 aaPredicted RBP12.9□□□□□ -0.34
TNFRSF21-201ENST00000296861 PHF10Q8WUB8 498 aaKnown RBP12.9□□□□□ -0.34
TNFRSF21-201ENST00000296861 ACOT13Q9NPJ3 140 aa12.9□□□□□ -0.34
TNFRSF21-201ENST00000296861 GIMAP4Q9NUV9 329 aa12.9□□□□□ -0.34
TNFRSF21-201ENST00000296861 PQBP1O60828 265 aaKnown RBP12.89□□□□□ -0.35
TNFRSF21-201ENST00000296861 FHP07954 510 aa12.89□□□□□ -0.35
TNFRSF21-201ENST00000296861 TGM4P49221 684 aa12.89□□□□□ -0.35
TNFRSF21-201ENST00000296861 RUNX1T1Q06455 604 aa12.89□□□□□ -0.35
TNFRSF21-201ENST00000296861 VMACQ2NL98 169 aa12.89□□□□□ -0.35
TNFRSF21-201ENST00000296861 LAIR1Q6GTX8 287 aa12.89□□□□□ -0.35
TNFRSF21-201ENST00000296861 LGI4Q8N135 537 aa12.89□□□□□ -0.35
TNFRSF21-201ENST00000296861 SLC5A8Q8N695 610 aa12.89□□□□□ -0.35
TNFRSF21-201ENST00000296861 OR10G2Q8NGC3 310 aa12.89□□□□□ -0.35
TNFRSF21-201ENST00000296861 FUBP3Q96I24 572 aaKnown RBP eCLIP12.89□□□□□ -0.352e-6■■□□□ 12.8
TNFRSF21-201ENST00000296861 NECTIN4Q96NY8 510 aa12.89□□□□□ -0.35
TNFRSF21-201ENST00000296861 SSX4O60224 188 aa12.89□□□□□ -0.35
TNFRSF21-201ENST00000296861 OR56A5P0C7T3 313 aa12.89□□□□□ -0.35
TNFRSF21-201ENST00000296861 ABHD18Q0P651 414 aa12.89□□□□□ -0.35
TNFRSF21-201ENST00000296861 HIST2H2ACQ16777 129 aaPredicted RBP12.89□□□□□ -0.35
TNFRSF21-201ENST00000296861 MORN1Q5T089 497 aa12.89□□□□□ -0.35
TNFRSF21-201ENST00000296861 ZNF362Q5T0B9 420 aaPredicted RBP12.89□□□□□ -0.35
TNFRSF21-201ENST00000296861 FRG2Q64ET8 278 aa12.89□□□□□ -0.35
TNFRSF21-201ENST00000296861 STEAP3Q658P3 488 aa12.89□□□□□ -0.35
TNFRSF21-201ENST00000296861 DEF8Q6ZN54 512 aa12.89□□□□□ -0.35
TNFRSF21-201ENST00000296861 VRK3Q8IV63 474 aa12.89□□□□□ -0.35
TNFRSF21-201ENST00000296861 DPP10Q8N608 796 aa12.89□□□□□ -0.35
TNFRSF21-201ENST00000296861 UROC1Q96N76 676 aa12.89□□□□□ -0.35
TNFRSF21-201ENST00000296861 DEPDC7Q96QD5 511 aa12.89□□□□□ -0.35
TNFRSF21-201ENST00000296861 FRG2BQ96QU4 278 aa12.89□□□□□ -0.35
TNFRSF21-201ENST00000296861 CITED4Q96RK1 184 aa12.89□□□□□ -0.35
TNFRSF21-201ENST00000296861 TTYH2Q9BSA4 534 aa12.89□□□□□ -0.35
TNFRSF21-201ENST00000296861 DUSP26Q9BV47 211 aa12.89□□□□□ -0.35
TNFRSF21-201ENST00000296861 RLIMQ9NVW2 624 aa12.89□□□□□ -0.35
TNFRSF21-201ENST00000296861 THG1LQ9NWX6 298 aaKnown RBP12.89□□□□□ -0.35
TNFRSF21-201ENST00000296861 SIRT5Q9NXA8 310 aa12.89□□□□□ -0.35
TNFRSF21-201ENST00000296861 DNAJC27Q9NZQ0 273 aa12.89□□□□□ -0.35
TNFRSF21-201ENST00000296861 PPT2Q9UMR5 302 aa12.89□□□□□ -0.35
TNFRSF21-201ENST00000296861 B3GNT3Q9Y2A9 372 aa12.89□□□□□ -0.35
TNFRSF21-201ENST00000296861 PCDHB1Q9Y5F3 818 aa12.89□□□□□ -0.35
TNFRSF21-201ENST00000296861 ANKDD1BA6NHY2 528 aa12.89□□□□□ -0.35
TNFRSF21-201ENST00000296861 SCAMP1O15126 338 aa12.89□□□□□ -0.35
TNFRSF21-201ENST00000296861 ATF6P18850 670 aa12.89□□□□□ -0.35
TNFRSF21-201ENST00000296861 FPR1P21462 350 aa12.89□□□□□ -0.35
TNFRSF21-201ENST00000296861 SOX6P35712 828 aa12.89□□□□□ -0.35
TNFRSF21-201ENST00000296861 BCDIN3DQ7Z5W3 292 aaKnown RBP12.89□□□□□ -0.35
TNFRSF21-201ENST00000296861 CMTM8Q8IZV2 173 aa12.89□□□□□ -0.35
TNFRSF21-201ENST00000296861 NAGSQ8N159 534 aa12.89□□□□□ -0.35
TNFRSF21-201ENST00000296861 LILRA3Q8N6C8 439 aaPredicted RBP12.89□□□□□ -0.35
TNFRSF21-201ENST00000296861 ITPAQ9BY32 194 aa12.89□□□□□ -0.35
TNFRSF21-201ENST00000296861 OR51B5Q9H339 312 aa12.89□□□□□ -0.35
TNFRSF21-201ENST00000296861 MS4A12Q9NXJ0 267 aa12.89□□□□□ -0.35
TNFRSF21-201ENST00000296861 TMEFF2Q9UIK5 374 aaPredicted RBP12.89□□□□□ -0.35
TNFRSF21-201ENST00000296861 KLHL20Q9Y2M5 609 aa12.89□□□□□ -0.35
TNFRSF21-201ENST00000296861 SLC45A1Q9Y2W3 748 aa12.89□□□□□ -0.35
TNFRSF21-201ENST00000296861 WASH4PA8MWX3 477 aa12.88□□□□□ -0.35
TNFRSF21-201ENST00000296861 ZNF623O75123 536 aa12.88□□□□□ -0.35
TNFRSF21-201ENST00000296861 CCNDBP1O95273 360 aa12.88□□□□□ -0.35
TNFRSF21-201ENST00000296861 HOXD8P13378 290 aaPredicted RBP12.88□□□□□ -0.35
TNFRSF21-201ENST00000296861 SPNP16150 400 aa12.88□□□□□ -0.35
TNFRSF21-201ENST00000296861 SSTR4P31391 388 aa12.88□□□□□ -0.35
TNFRSF21-201ENST00000296861 ATP6V1E1P36543 226 aa12.88□□□□□ -0.35
TNFRSF21-201ENST00000296861 SPAM1P38567 509 aa12.88□□□□□ -0.35
TNFRSF21-201ENST00000296861 MC1RQ01726 317 aa12.88□□□□□ -0.35
TNFRSF21-201ENST00000296861 DGKKQ5KSL6 1271 aa12.88□□□□□ -0.35
TNFRSF21-201ENST00000296861 SNX20Q7Z614 316 aa12.88□□□□□ -0.35
TNFRSF21-201ENST00000296861 GLB1L3Q8NCI6 653 aaPredicted RBP12.88□□□□□ -0.35
TNFRSF21-201ENST00000296861 GPR26Q8NDV2 337 aa12.88□□□□□ -0.35
TNFRSF21-201ENST00000296861 OR6Q1Q8NGQ2 317 aa12.88□□□□□ -0.35
TNFRSF21-201ENST00000296861 TRIB3Q96RU7 358 aa12.88□□□□□ -0.35
TNFRSF21-201ENST00000296861 C2orf49Q9BVC5 232 aaPredicted RBP12.88□□□□□ -0.35
TNFRSF21-201ENST00000296861 SLC32A1Q9H598 525 aa12.88□□□□□ -0.35
TNFRSF21-201ENST00000296861 ASCC3Q8N3C0 2202 aaKnown RBP12.88□□□□□ -0.35
TNFRSF21-201ENST00000296861 SLC35F4A4IF30 521 aa12.88□□□□□ -0.35
TNFRSF21-201ENST00000296861 WWP2O00308 870 aa12.88□□□□□ -0.35
TNFRSF21-201ENST00000296861 OR10H3O60404 316 aa12.88□□□□□ -0.35
TNFRSF21-201ENST00000296861 JUNBP17275 347 aaPredicted RBP12.88□□□□□ -0.35
TNFRSF21-201ENST00000296861 ITIH1P19827 911 aa12.88□□□□□ -0.35
TNFRSF21-201ENST00000296861 MAPK1P28482 360 aa12.88□□□□□ -0.35
TNFRSF21-201ENST00000296861 SERPINA4P29622 427 aa12.88□□□□□ -0.35
TNFRSF21-201ENST00000296861 BDKRB1P46663 353 aa12.88□□□□□ -0.35
TNFRSF21-201ENST00000296861 SUOXP51687 545 aa12.88□□□□□ -0.35
TNFRSF21-201ENST00000296861 FCGRTP55899 365 aa12.88□□□□□ -0.35
TNFRSF21-201ENST00000296861 LEXMQ3ZCV2 418 aa12.88□□□□□ -0.35
TNFRSF21-201ENST00000296861 TRMT11Q7Z4G4 463 aaKnown RBP12.88□□□□□ -0.35
TNFRSF21-201ENST00000296861 STARD7Q9NQZ5 370 aa12.88□□□□□ -0.35
TNFRSF21-201ENST00000296861 DNAJC11Q9NVH1 559 aa12.88□□□□□ -0.35
TNFRSF21-201ENST00000296861 C5AR2Q9P296 337 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms