RNA–Protein interactions for RNA: ENST00000296449.9

CCDC36-201, Transcript of coiled-coil domain containing 36, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC36, Length 2,613 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC36-201ENST00000296449 MAPK1P28482 360 aa9.86□□□□□ -0.83
CCDC36-201ENST00000296449 ATP5C1P36542 298 aaKnown RBP9.86□□□□□ -0.83
CCDC36-201ENST00000296449 CRISP3P54108 245 aa9.86□□□□□ -0.83
CCDC36-201ENST00000296449 UGT2B15P54855 530 aa9.86□□□□□ -0.83
CCDC36-201ENST00000296449 KCNJ10P78508 379 aa9.86□□□□□ -0.83
CCDC36-201ENST00000296449 BOP1Q14137 746 aaKnown RBP9.86□□□□□ -0.83
CCDC36-201ENST00000296449 CLPPQ16740 277 aaPredicted RBP9.86□□□□□ -0.83
CCDC36-201ENST00000296449 UGT8Q16880 541 aa9.86□□□□□ -0.83
CCDC36-201ENST00000296449 AGAP6Q5VW22 663 aa9.86□□□□□ -0.83
CCDC36-201ENST00000296449 RSBN1Q5VWQ0 802 aaPredicted RBP9.86□□□□□ -0.83
CCDC36-201ENST00000296449 NOXRED1Q6NXP6 359 aa9.86□□□□□ -0.83
CCDC36-201ENST00000296449 NEK5Q6P3R8 708 aa9.86□□□□□ -0.83
CCDC36-201ENST00000296449 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP9.86□□□□□ -0.83
CCDC36-201ENST00000296449 MACC1Q6ZN28 852 aa9.86□□□□□ -0.83
CCDC36-201ENST00000296449 NANOGNBQ7Z5D8 188 aa9.86□□□□□ -0.83
CCDC36-201ENST00000296449 AGAP4Q96P64 663 aa9.86□□□□□ -0.83
CCDC36-201ENST00000296449 CHCHD6Q9BRQ6 235 aa9.86□□□□□ -0.83
CCDC36-201ENST00000296449 EBPLQ9BY08 206 aa9.86□□□□□ -0.83
CCDC36-201ENST00000296449 OR2B2Q9GZK3 357 aa9.86□□□□□ -0.83
CCDC36-201ENST00000296449 RAD18Q9NS91 495 aa9.86□□□□□ -0.83
CCDC36-201ENST00000296449 ARL15Q9NXU5 204 aa9.86□□□□□ -0.83
CCDC36-201ENST00000296449 SNX6Q9UNH7 406 aa9.86□□□□□ -0.83
CCDC36-201ENST00000296449 AP1M2Q9Y6Q5 423 aa9.86□□□□□ -0.83
CCDC36-201ENST00000296449 TRBV5-4A0A0C4DH59 114 aa9.86□□□□□ -0.83
CCDC36-201ENST00000296449 FAM172BPA6NC97 362 aa9.86□□□□□ -0.83
CCDC36-201ENST00000296449 UPK3BL1B0FP48 263 aa9.86□□□□□ -0.83
CCDC36-201ENST00000296449 UPK3BL2E5RIL1 263 aa9.86□□□□□ -0.83
CCDC36-201ENST00000296449 SYN3O14994 580 aa9.86□□□□□ -0.83
CCDC36-201ENST00000296449 NUDT7P0C024 238 aa9.86□□□□□ -0.83
CCDC36-201ENST00000296449 AMD1P17707 334 aa9.86□□□□□ -0.83
CCDC36-201ENST00000296449 ITGALP20701 1170 aa9.86□□□□□ -0.83
CCDC36-201ENST00000296449 PRPS1L1P21108 318 aa9.86□□□□□ -0.83
CCDC36-201ENST00000296449 RRM2P31350 389 aa9.86□□□□□ -0.83
CCDC36-201ENST00000296449 RGS6P49758 472 aa9.86□□□□□ -0.83
CCDC36-201ENST00000296449 FOXD4Q12950 439 aaPredicted RBP9.86□□□□□ -0.83
CCDC36-201ENST00000296449 VEZF1Q14119 521 aa9.86□□□□□ -0.83
CCDC36-201ENST00000296449 MRPL58Q14197 206 aaKnown RBP9.86□□□□□ -0.83
CCDC36-201ENST00000296449 GGTA1PQ4G0N0 100 aa9.86□□□□□ -0.83
CCDC36-201ENST00000296449 ARMCX4Q5H9R4 360 aa9.86□□□□□ -0.83
CCDC36-201ENST00000296449 TOR1AIP1Q5JTV8 583 aa9.86□□□□□ -0.83
CCDC36-201ENST00000296449 RSPO2Q6UXX9 243 aaPredicted RBP9.86□□□□□ -0.83
CCDC36-201ENST00000296449 TSEN54Q7Z6J9 526 aaKnown RBP9.86□□□□□ -0.83
CCDC36-201ENST00000296449 CLECL1Q8IZS7 167 aa9.86□□□□□ -0.83
CCDC36-201ENST00000296449 SYNPOQ8N3V7 929 aa9.86□□□□□ -0.83
CCDC36-201ENST00000296449 TRPV1Q8NER1 839 aa9.86□□□□□ -0.83
CCDC36-201ENST00000296449 PIH1D2Q8WWB5 315 aa9.86□□□□□ -0.83
CCDC36-201ENST00000296449 FEVQ99581 238 aa9.86□□□□□ -0.83
CCDC36-201ENST00000296449 SDHCQ99643 169 aaPredicted RBP9.86□□□□□ -0.83
CCDC36-201ENST00000296449 XRN2Q9H0D6 950 aaKnown RBP eCLIP9.86□□□□□ -0.83
CCDC36-201ENST00000296449 EHD3Q9NZN3 535 aa9.86□□□□□ -0.83
CCDC36-201ENST00000296449 PCDHGB3Q9Y5G1 929 aa9.86□□□□□ -0.83
CCDC36-201ENST00000296449 PIKFYVEQ9Y2I7 2098 aa9.85□□□□□ -0.83
CCDC36-201ENST00000296449 TMEM229AB2RXF0 380 aa9.85□□□□□ -0.83
CCDC36-201ENST00000296449 GFRA2O00451 464 aa9.85□□□□□ -0.83
CCDC36-201ENST00000296449 APOA1P02647 267 aa9.85□□□□□ -0.83
CCDC36-201ENST00000296449 RPIAP49247 311 aa9.85□□□□□ -0.83
CCDC36-201ENST00000296449 RHOAP61586 193 aa9.85□□□□□ -0.83
CCDC36-201ENST00000296449 DUSP4Q13115 394 aa9.85□□□□□ -0.83
CCDC36-201ENST00000296449 CDKL4Q5MAI5 379 aa9.85□□□□□ -0.83
CCDC36-201ENST00000296449 ARMC12Q5T9G4 340 aa9.85□□□□□ -0.83
CCDC36-201ENST00000296449 CHST9Q7L1S5 443 aa9.85□□□□□ -0.83
CCDC36-201ENST00000296449 CCDC190Q86UF4 302 aa9.85□□□□□ -0.83
CCDC36-201ENST00000296449 RTN4RL1Q86UN2 441 aaPredicted RBP9.85□□□□□ -0.83
CCDC36-201ENST00000296449 CYP4Z2PQ8N1L4 340 aa9.85□□□□□ -0.83
CCDC36-201ENST00000296449 RNF175Q8N4F7 328 aa9.85□□□□□ -0.83
CCDC36-201ENST00000296449 OR6F1Q8NGZ6 308 aa9.85□□□□□ -0.83
CCDC36-201ENST00000296449 MYO19Q96H55 970 aa9.85□□□□□ -0.83
CCDC36-201ENST00000296449 COL21A1Q96P44 957 aa9.85□□□□□ -0.83
CCDC36-201ENST00000296449 C19orf43Q9BQ61 176 aa9.85□□□□□ -0.83
CCDC36-201ENST00000296449 NUAK2Q9H093 628 aa9.85□□□□□ -0.83
CCDC36-201ENST00000296449 RUBCNLQ9H714 662 aa9.85□□□□□ -0.83
CCDC36-201ENST00000296449 ZFYVE1Q9HBF4 777 aa9.85□□□□□ -0.83
CCDC36-201ENST00000296449 TRMT13Q9NUP7 481 aaKnown RBP9.85□□□□□ -0.83
CCDC36-201ENST00000296449 FCF1Q9Y324 198 aaKnown RBP9.85□□□□□ -0.83
CCDC36-201ENST00000296449 KLK4Q9Y5K2 254 aa9.85□□□□□ -0.83
CCDC36-201ENST00000296449 OR6C75A6NL08 312 aa9.85□□□□□ -0.83
CCDC36-201ENST00000296449 LOC110117498-PIK3R3F6TDL0 507 aa9.85□□□□□ -0.83
CCDC36-201ENST00000296449 YY2O15391 372 aa9.85□□□□□ -0.83
CCDC36-201ENST00000296449 ZW10O43264 779 aa9.85□□□□□ -0.83
CCDC36-201ENST00000296449 PRAMEF4O60810 478 aa9.85□□□□□ -0.83
CCDC36-201ENST00000296449 AOC2O75106 756 aa9.85□□□□□ -0.83
CCDC36-201ENST00000296449 CPSF4O95639 269 aaKnown RBP9.85□□□□□ -0.83
CCDC36-201ENST00000296449 IGHA2P01877 340 aa9.85□□□□□ -0.83
CCDC36-201ENST00000296449 KRT8P05787 483 aa9.85□□□□□ -0.83
CCDC36-201ENST00000296449 CYP4F2P78329 520 aa9.85□□□□□ -0.83
CCDC36-201ENST00000296449 OLR1P78380 273 aa9.85□□□□□ -0.83
CCDC36-201ENST00000296449 SRSF11Q05519 484 aaKnown RBP9.85□□□□□ -0.83
CCDC36-201ENST00000296449 SPANXN2Q5MJ10 180 aa9.85□□□□□ -0.83
CCDC36-201ENST00000296449 PRAMEF9Q5VWM5 478 aa9.85□□□□□ -0.83
CCDC36-201ENST00000296449 UTS2BQ765I0 119 aa9.85□□□□□ -0.83
CCDC36-201ENST00000296449 GET4Q7L5D6 327 aaPredicted RBP9.85□□□□□ -0.83
CCDC36-201ENST00000296449 SYT12Q8IV01 421 aa9.85□□□□□ -0.83
CCDC36-201ENST00000296449 SLC5A8Q8N695 610 aa9.85□□□□□ -0.83
CCDC36-201ENST00000296449 PAF1Q8N7H5 531 aa9.85□□□□□ -0.83
CCDC36-201ENST00000296449 LILRB4Q8NHJ6 448 aa9.85□□□□□ -0.83
CCDC36-201ENST00000296449 CSGALNACT1Q8TDX6 532 aa9.85□□□□□ -0.83
CCDC36-201ENST00000296449 ELMO1Q92556 727 aa9.85□□□□□ -0.83
CCDC36-201ENST00000296449 PIK3R3Q92569 461 aa9.85□□□□□ -0.83
CCDC36-201ENST00000296449 SNX18Q96RF0 628 aa9.85□□□□□ -0.83
CCDC36-201ENST00000296449 CCDC32Q9BV29 185 aa9.85□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 66.4 ms