RNA–Protein interactions for RNA: ENST00000282223.11

SPOCK1-201, Transcript of SPARC (osteonectin), cwcv and kazal like domains proteoglycan 1, humanhuman

TSL 5 BASIC

Gene SPOCK1, Length 4,488 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPOCK1-201ENST00000282223 RAF1P04049 648 aa7.56□□□□□ -1.2
SPOCK1-201ENST00000282223 PCMT1P22061 227 aa7.56□□□□□ -1.2
SPOCK1-201ENST00000282223 SDC2P34741 201 aa7.56□□□□□ -1.2
SPOCK1-201ENST00000282223 PER3P56645 1201 aa7.56□□□□□ -1.2
SPOCK1-201ENST00000282223 SPIBQ01892 262 aa7.56□□□□□ -1.2
SPOCK1-201ENST00000282223 UGT3A2Q3SY77 523 aa7.56□□□□□ -1.2
SPOCK1-201ENST00000282223 SPANXN4Q5MJ08 99 aa7.56□□□□□ -1.2
SPOCK1-201ENST00000282223 ZNF425Q6IV72 752 aa7.56□□□□□ -1.2
SPOCK1-201ENST00000282223 KDELC1Q6UW63 502 aa7.56□□□□□ -1.2
SPOCK1-201ENST00000282223 LRRN1Q6UXK5 716 aa7.56□□□□□ -1.2
SPOCK1-201ENST00000282223 RTL4Q6ZR62 310 aa7.56□□□□□ -1.2
SPOCK1-201ENST00000282223 CEP68Q76N32 757 aa7.56□□□□□ -1.2
SPOCK1-201ENST00000282223 ENTHD1Q8IYW4 607 aa7.56□□□□□ -1.2
SPOCK1-201ENST00000282223 PGBD3Q8N328 593 aa7.56□□□□□ -1.2
SPOCK1-201ENST00000282223 SETD6Q8TBK2 473 aa7.56□□□□□ -1.2
SPOCK1-201ENST00000282223 S100PBPQ96BU1 408 aa7.56□□□□□ -1.2
SPOCK1-201ENST00000282223 BTN2A3PQ96KV6 586 aa7.56□□□□□ -1.2
SPOCK1-201ENST00000282223 THUMPD1Q9NXG2 353 aaKnown RBP7.56□□□□□ -1.2
SPOCK1-201ENST00000282223 OR6C2Q9NZP2 312 aa7.56□□□□□ -1.2
SPOCK1-201ENST00000282223 NDUFAF4Q9P032 175 aa7.56□□□□□ -1.2
SPOCK1-201ENST00000282223 MBD2Q9UBB5 411 aa7.56□□□□□ -1.2
SPOCK1-201ENST00000282223 SEC14L4Q9UDX3 406 aa7.56□□□□□ -1.2
SPOCK1-201ENST00000282223 AKAP11Q9UKA4 1901 aa7.56□□□□□ -1.2
SPOCK1-201ENST00000282223 TP53BP1Q12888 1972 aaPredicted RBP7.56□□□□□ -1.2
SPOCK1-201ENST00000282223 C3P01024 1663 aa7.56□□□□□ -1.2
SPOCK1-201ENST00000282223 OR2A25A4D2G3 310 aa7.56□□□□□ -1.2
SPOCK1-201ENST00000282223 KHDRBS3O75525 346 aaKnown RBP7.56□□□□□ -1.2
SPOCK1-201ENST00000282223 ALDH1A1P00352 501 aa7.56□□□□□ -1.2
SPOCK1-201ENST00000282223 COL1A1P02452 1464 aaPredicted RBP7.56□□□□□ -1.2
SPOCK1-201ENST00000282223 DDX6P26196 483 aaKnown RBP eCLIP7.56□□□□□ -1.2
SPOCK1-201ENST00000282223 PRDX3P30048 256 aaKnown RBP7.56□□□□□ -1.2
SPOCK1-201ENST00000282223 CDC42P60953 191 aa7.56□□□□□ -1.2
SPOCK1-201ENST00000282223 GRM1Q13255 1194 aa7.56□□□□□ -1.2
SPOCK1-201ENST00000282223 MOSPD2Q8NHP6 518 aa7.56□□□□□ -1.2
SPOCK1-201ENST00000282223 RDH12Q96NR8 316 aa7.56□□□□□ -1.2
SPOCK1-201ENST00000282223 WDR77Q9BQA1 342 aaPredicted RBP7.56□□□□□ -1.2
SPOCK1-201ENST00000282223 TRMOQ9BU70 441 aa7.56□□□□□ -1.2
SPOCK1-201ENST00000282223 SPNS1Q9H2V7 528 aa7.56□□□□□ -1.2
SPOCK1-201ENST00000282223 RC3H2Q9HBD1 1191 aaKnown RBP7.56□□□□□ -1.2
SPOCK1-201ENST00000282223 TMEM138Q9NPI0 162 aa7.56□□□□□ -1.2
SPOCK1-201ENST00000282223 ERVK-19Q9WJR5 959 aa7.56□□□□□ -1.2
SPOCK1-201ENST00000282223 M0QZ92 97 aa7.55□□□□□ -1.2
SPOCK1-201ENST00000282223 SEPT4O43236 478 aa7.55□□□□□ -1.2
SPOCK1-201ENST00000282223 BMP1P13497 986 aa7.55□□□□□ -1.2
SPOCK1-201ENST00000282223 TNFRSF1BP20333 461 aa7.55□□□□□ -1.2
SPOCK1-201ENST00000282223 LHCGRP22888 699 aa7.55□□□□□ -1.2
SPOCK1-201ENST00000282223 PTPN3P26045 913 aa7.55□□□□□ -1.2
SPOCK1-201ENST00000282223 MAOBP27338 520 aa7.55□□□□□ -1.2
SPOCK1-201ENST00000282223 CPT1AP50416 773 aa7.55□□□□□ -1.2
SPOCK1-201ENST00000282223 RABGGTBP53611 331 aa7.55□□□□□ -1.2
SPOCK1-201ENST00000282223 CSNK2BP67870 215 aa7.55□□□□□ -1.2
SPOCK1-201ENST00000282223 TNFRSF17Q02223 184 aa7.55□□□□□ -1.2
SPOCK1-201ENST00000282223 C9orf152Q5JTZ5 239 aa7.55□□□□□ -1.2
SPOCK1-201ENST00000282223 SAXO2Q658L1 398 aa7.55□□□□□ -1.2
SPOCK1-201ENST00000282223 NCBP2-AS2Q69YL0 99 aa7.55□□□□□ -1.2
SPOCK1-201ENST00000282223 DOK6Q6PKX4 331 aa7.55□□□□□ -1.2
SPOCK1-201ENST00000282223 LINC00299Q6ZSB3 139 aa7.55□□□□□ -1.2
SPOCK1-201ENST00000282223 SLC46A3Q7Z3Q1 461 aa7.55□□□□□ -1.2
SPOCK1-201ENST00000282223 ATPAF2Q8N5M1 289 aa7.55□□□□□ -1.2
SPOCK1-201ENST00000282223 GIMAP1Q8WWP7 306 aa7.55□□□□□ -1.2
SPOCK1-201ENST00000282223 NR4A3Q92570 626 aa7.55□□□□□ -1.2
SPOCK1-201ENST00000282223 NLNQ9BYT8 704 aa7.55□□□□□ -1.2
SPOCK1-201ENST00000282223 DUSP21Q9H596 190 aa7.55□□□□□ -1.2
SPOCK1-201ENST00000282223 AGO4Q9HCK5 861 aaKnown RBP7.55□□□□□ -1.2
SPOCK1-201ENST00000282223 TNFRSF10DQ9UBN6 386 aa7.55□□□□□ -1.2
SPOCK1-201ENST00000282223 ARHGEF33A8MVX0 844 aa7.55□□□□□ -1.2
SPOCK1-201ENST00000282223 UBFD1O14562 309 aaKnown RBP7.55□□□□□ -1.2
SPOCK1-201ENST00000282223 PCDH17O14917 1159 aa7.55□□□□□ -1.2
SPOCK1-201ENST00000282223 SCAMP1O15126 338 aa7.55□□□□□ -1.2
SPOCK1-201ENST00000282223 ADAMDEC1O15204 470 aa7.55□□□□□ -1.2
SPOCK1-201ENST00000282223 SPDEFO95238 335 aa7.55□□□□□ -1.2
SPOCK1-201ENST00000282223 SOX14O95416 240 aa7.55□□□□□ -1.2
SPOCK1-201ENST00000282223 FEN1P39748 380 aaKnown RBP7.55□□□□□ -1.2
SPOCK1-201ENST00000282223 AGTR2P50052 363 aa7.55□□□□□ -1.2
SPOCK1-201ENST00000282223 CAMK1Q14012 370 aa7.55□□□□□ -1.2
SPOCK1-201ENST00000282223 MBTPS1Q14703 1052 aa7.55□□□□□ -1.2
SPOCK1-201ENST00000282223 UNC50Q53HI1 259 aa7.55□□□□□ -1.2
SPOCK1-201ENST00000282223 IDNKQ5T6J7 187 aa7.55□□□□□ -1.2
SPOCK1-201ENST00000282223 STEAP4Q687X5 459 aa7.55□□□□□ -1.2
SPOCK1-201ENST00000282223 CNIH2Q6PI25 160 aa7.55□□□□□ -1.2
SPOCK1-201ENST00000282223 PELI3Q8N2H9 469 aa7.55□□□□□ -1.2
SPOCK1-201ENST00000282223 NETO1Q8TDF5 533 aa7.55□□□□□ -1.2
SPOCK1-201ENST00000282223 SLC13A3Q8WWT9 602 aa7.55□□□□□ -1.2
SPOCK1-201ENST00000282223 TGIF2Q9GZN2 237 aa7.55□□□□□ -1.2
SPOCK1-201ENST00000282223 TRPS1Q9UHF7 1281 aa7.55□□□□□ -1.2
SPOCK1-201ENST00000282223 PCDHA9Q9Y5H5 950 aa7.55□□□□□ -1.2
SPOCK1-201ENST00000282223 TNFRSF11BO00300 401 aa7.55□□□□□ -1.2
SPOCK1-201ENST00000282223 EEF1E1O43324 174 aaKnown RBP7.55□□□□□ -1.2
SPOCK1-201ENST00000282223 FABP3P05413 133 aa7.55□□□□□ -1.2
SPOCK1-201ENST00000282223 GJB1P08034 283 aa7.55□□□□□ -1.2
SPOCK1-201ENST00000282223 YBX3P16989 372 aaKnown RBP eCLIP7.55□□□□□ -1.2
SPOCK1-201ENST00000282223 UBA1P22314 1058 aaKnown RBP7.55□□□□□ -1.2
SPOCK1-201ENST00000282223 CPN2P22792 545 aa7.55□□□□□ -1.2
SPOCK1-201ENST00000282223 SLC16A1P53985 500 aa7.55□□□□□ -1.2
SPOCK1-201ENST00000282223 FAM98CQ17RN3 349 aaKnown RBP7.55□□□□□ -1.2
SPOCK1-201ENST00000282223 SUPT20HL1Q3ZLR7 823 aa7.55□□□□□ -1.2
SPOCK1-201ENST00000282223 TOR1AIP1Q5JTV8 583 aa7.55□□□□□ -1.2
SPOCK1-201ENST00000282223 HES5Q5TA89 166 aa7.55□□□□□ -1.2
SPOCK1-201ENST00000282223 KIAA1841Q6NSI8 718 aa7.55□□□□□ -1.2
SPOCK1-201ENST00000282223 FAM171BQ6P995 826 aa7.55□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms