RNA–Protein interactions for RNA: ENST00000266661.8

BEST3-201, Transcript of bestrophin 3, humanhuman

TSL 1 (best) BASIC

Gene BEST3, Length 1,876 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3-201ENST00000266661 FPGTO14772 594 aa12.04□□□□□ -0.48
BEST3-201ENST00000266661 SLC22A1O15245 554 aa12.04□□□□□ -0.48
BEST3-201ENST00000266661 UGDHO60701 494 aa12.04□□□□□ -0.48
BEST3-201ENST00000266661 SERPINB7O75635 380 aa12.04□□□□□ -0.48
BEST3-201ENST00000266661 EFNA1P20827 205 aaPredicted RBP12.04□□□□□ -0.48
BEST3-201ENST00000266661 EPHA2P29317 976 aa12.04□□□□□ -0.48
BEST3-201ENST00000266661 MAP2K4P45985 399 aa12.04□□□□□ -0.48
BEST3-201ENST00000266661 SPINT3P49223 89 aa12.04□□□□□ -0.48
BEST3-201ENST00000266661 STK19P49842 368 aaPredicted RBP12.04□□□□□ -0.48
BEST3-201ENST00000266661 ITGA1P56199 1179 aa12.04□□□□□ -0.48
BEST3-201ENST00000266661 AP1S2P56377 157 aa12.04□□□□□ -0.48
BEST3-201ENST00000266661 SLC7A9P82251 487 aa12.04□□□□□ -0.48
BEST3-201ENST00000266661 CSTF3Q12996 717 aaKnown RBP12.04□□□□□ -0.48
BEST3-201ENST00000266661 VEZF1Q14119 521 aa12.04□□□□□ -0.48
BEST3-201ENST00000266661 SIM2Q14190 667 aaPredicted RBP12.04□□□□□ -0.48
BEST3-201ENST00000266661 ZNF846Q147U1 533 aa12.04□□□□□ -0.48
BEST3-201ENST00000266661 MAD2L1BPQ15013 274 aaPredicted RBP12.04□□□□□ -0.48
BEST3-201ENST00000266661 MPPE1Q53F39 396 aa12.04□□□□□ -0.48
BEST3-201ENST00000266661 LDLRAP1Q5SW96 308 aa12.04□□□□□ -0.48
BEST3-201ENST00000266661 LIPJQ5W064 366 aa12.04□□□□□ -0.48
BEST3-201ENST00000266661 ZCCHC8Q6NZY4 707 aaKnown RBP12.04□□□□□ -0.48
BEST3-201ENST00000266661 SERPINA13PQ6UXR4 307 aa12.04□□□□□ -0.48
BEST3-201ENST00000266661 GAREM2Q75VX8 874 aa12.04□□□□□ -0.48
BEST3-201ENST00000266661 CYP2U1Q7Z449 544 aa12.04□□□□□ -0.48
BEST3-201ENST00000266661 TSPYL5Q86VY4 417 aaPredicted RBP12.04□□□□□ -0.48
BEST3-201ENST00000266661 SLC39A11Q8N1S5 342 aa12.04□□□□□ -0.48
BEST3-201ENST00000266661 DYNC2LI1Q8TCX1 351 aa12.04□□□□□ -0.48
BEST3-201ENST00000266661 MAGEB10Q96LZ2 347 aaPredicted RBP12.04□□□□□ -0.48
BEST3-201ENST00000266661 PBX4Q9BYU1 374 aa12.04□□□□□ -0.48
BEST3-201ENST00000266661 ABCG8Q9H221 673 aa12.04□□□□□ -0.48
BEST3-201ENST00000266661 CERS4Q9HA82 394 aa12.04□□□□□ -0.48
BEST3-201ENST00000266661 FBXO8Q9NRD0 319 aa12.04□□□□□ -0.48
BEST3-201ENST00000266661 FAM120CQ9NX05 1096 aaKnown RBP12.04□□□□□ -0.48
BEST3-201ENST00000266661 BTBD3Q9Y2F9 522 aa12.04□□□□□ -0.48
BEST3-201ENST00000266661 TPRKBQ9Y3C4 175 aa12.04□□□□□ -0.48
BEST3-201ENST00000266661 DGKBQ9Y6T7 804 aa12.04□□□□□ -0.48
BEST3-201ENST00000266661 C5orf42Q9H799 3197 aa12.04□□□□□ -0.48
BEST3-201ENST00000266661 C1orf226A1L170 272 aa12.04□□□□□ -0.48
BEST3-201ENST00000266661 KRT87PA6NCN2 255 aa12.04□□□□□ -0.48
BEST3-201ENST00000266661 WBP4O75554 376 aaKnown RBP12.04□□□□□ -0.48
BEST3-201ENST00000266661 ZNF682O95780 498 aa12.04□□□□□ -0.48
BEST3-201ENST00000266661 MT-ND2P03891 347 aa12.04□□□□□ -0.48
BEST3-201ENST00000266661 FABP3P05413 133 aa12.04□□□□□ -0.48
BEST3-201ENST00000266661 ATP1B2P14415 290 aaPredicted RBP12.04□□□□□ -0.48
BEST3-201ENST00000266661 EPHB3P54753 998 aa12.04□□□□□ -0.48
BEST3-201ENST00000266661 SNRPD1P62314 119 aaKnown RBP12.04□□□□□ -0.48
BEST3-201ENST00000266661 IFITM3Q01628 133 aa12.04□□□□□ -0.48
BEST3-201ENST00000266661 HSPA14Q0VDF9 509 aa12.04□□□□□ -0.48
BEST3-201ENST00000266661 CHIT1Q13231 466 aa12.04□□□□□ -0.48
BEST3-201ENST00000266661 RGS21Q2M5E4 152 aa12.04□□□□□ -0.48
BEST3-201ENST00000266661 ZDHHC20Q5W0Z9 365 aa12.04□□□□□ -0.48
BEST3-201ENST00000266661 EGFLAMQ63HQ2 1017 aa12.04□□□□□ -0.48
BEST3-201ENST00000266661 USP45Q70EL2 814 aa12.04□□□□□ -0.48
BEST3-201ENST00000266661 CAMKMTQ7Z624 323 aa12.04□□□□□ -0.48
BEST3-201ENST00000266661 VTCN1Q7Z7D3 282 aa12.04□□□□□ -0.48
BEST3-201ENST00000266661 RORBQ92753 470 aa12.04□□□□□ -0.48
BEST3-201ENST00000266661 METTL2AQ96IZ6 378 aaKnown RBP12.04□□□□□ -0.48
BEST3-201ENST00000266661 ALPK1Q96QP1 1244 aa12.04□□□□□ -0.48
BEST3-201ENST00000266661 RHNO1Q9BSD3 238 aa12.04□□□□□ -0.48
BEST3-201ENST00000266661 RIBC2Q9H4K1 309 aa12.04□□□□□ -0.48
BEST3-201ENST00000266661 RPS6KA6Q9UK32 745 aa12.04□□□□□ -0.48
BEST3-201ENST00000266661 TLL1O43897 1013 aa12.03□□□□□ -0.48
BEST3-201ENST00000266661 GCM2O75603 506 aaPredicted RBP12.03□□□□□ -0.48
BEST3-201ENST00000266661 DIRAS1O95057 198 aa12.03□□□□□ -0.48
BEST3-201ENST00000266661 CA3P07451 260 aa12.03□□□□□ -0.48
BEST3-201ENST00000266661 ABCB1P08183 1280 aaPredicted RBP12.03□□□□□ -0.48
BEST3-201ENST00000266661 HIST1H2AGP0C0S8 130 aaPredicted RBP12.03□□□□□ -0.48
BEST3-201ENST00000266661 HIST1H2ADP20671 130 aa12.03□□□□□ -0.48
BEST3-201ENST00000266661 TGFBR2P37173 567 aa12.03□□□□□ -0.48
BEST3-201ENST00000266661 PXNP49023 591 aaPredicted RBP12.03□□□□□ -0.48
BEST3-201ENST00000266661 RAE1P78406 368 aaKnown RBP12.03□□□□□ -0.48
BEST3-201ENST00000266661 MVKQ03426 396 aa12.03□□□□□ -0.48
BEST3-201ENST00000266661 FADDQ13158 208 aa12.03□□□□□ -0.48
BEST3-201ENST00000266661 ITGADQ13349 1161 aa12.03□□□□□ -0.48
BEST3-201ENST00000266661 GTF2H3Q13889 308 aa12.03□□□□□ -0.48
BEST3-201ENST00000266661 E2F2Q14209 437 aa12.03□□□□□ -0.48
BEST3-201ENST00000266661 CLCA4Q14CN2 919 aa12.03□□□□□ -0.48
BEST3-201ENST00000266661 SMN1Q16637 294 aaKnown RBP12.03□□□□□ -0.48
BEST3-201ENST00000266661 C22orf39Q6P5X5 142 aa12.03□□□□□ -0.48
BEST3-201ENST00000266661 PRSS48Q7RTY5 328 aa12.03□□□□□ -0.48
BEST3-201ENST00000266661 GALNT10Q86SR1 603 aa12.03□□□□□ -0.48
BEST3-201ENST00000266661 CLECL1Q8IZS7 167 aa12.03□□□□□ -0.48
BEST3-201ENST00000266661 TTC29Q8NA56 475 aaPredicted RBP12.03□□□□□ -0.48
BEST3-201ENST00000266661 NDNFQ8TB73 568 aa12.03□□□□□ -0.48
BEST3-201ENST00000266661 APH1BQ8WW43 257 aa12.03□□□□□ -0.48
BEST3-201ENST00000266661 HSH2DQ96JZ2 352 aa12.03□□□□□ -0.48
BEST3-201ENST00000266661 HIST1H2AHQ96KK5 128 aa12.03□□□□□ -0.48
BEST3-201ENST00000266661 PANX1Q96RD7 426 aa12.03□□□□□ -0.48
BEST3-201ENST00000266661 HIST1H2AJQ99878 128 aa12.03□□□□□ -0.48
BEST3-201ENST00000266661 H2AFJQ9BTM1 129 aa12.03□□□□□ -0.48
BEST3-201ENST00000266661 BRD9Q9H8M2 597 aa12.03□□□□□ -0.48
BEST3-201ENST00000266661 ACOT13Q9NPJ3 140 aa12.03□□□□□ -0.48
BEST3-201ENST00000266661 B4GALT6Q9UBX8 382 aa12.03□□□□□ -0.48
BEST3-201ENST00000266661 PCDHB11Q9Y5F2 797 aa12.03□□□□□ -0.48
BEST3-201ENST00000266661 MAGEB17A8MXT2 336 aa12.02□□□□□ -0.48
BEST3-201ENST00000266661 hCG_2039718K7EN88 272 aa12.02□□□□□ -0.48
BEST3-201ENST00000266661 PRRG1O14668 218 aa12.02□□□□□ -0.48
BEST3-201ENST00000266661 SLCO2B1O94956 709 aa12.02□□□□□ -0.48
BEST3-201ENST00000266661 EPN2O95208 641 aa12.02□□□□□ -0.48
BEST3-201ENST00000266661 CTSAP10619 480 aa12.02□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms