RNA–Protein interactions for RNA: ENST00000265896.9

SQLE-201, Transcript of squalene epoxidase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SQLE, Length 2,961 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-201ENST00000265896 ZNF232Q9UNY5 417 aa16.26■□□□□ 0.19
SQLE-201ENST00000265896 COL4A4P53420 1690 aaPredicted RBP16.26■□□□□ 0.19
SQLE-201ENST00000265896 PNMA8CA0A1B0GUJ8 204 aa16.26■□□□□ 0.19
SQLE-201ENST00000265896 E7EQ34 232 aa16.26■□□□□ 0.19
SQLE-201ENST00000265896 PRRG1O14668 218 aa16.26■□□□□ 0.19
SQLE-201ENST00000265896 EPN2O95208 641 aa16.26■□□□□ 0.19
SQLE-201ENST00000265896 HIST1H2AGP0C0S8 130 aaPredicted RBP16.26■□□□□ 0.19
SQLE-201ENST00000265896 HIST1H2ADP20671 130 aa16.26■□□□□ 0.19
SQLE-201ENST00000265896 CDH12P55289 794 aa16.26■□□□□ 0.19
SQLE-201ENST00000265896 GABARAPL2P60520 117 aa16.26■□□□□ 0.19
SQLE-201ENST00000265896 MC1RQ01726 317 aa16.26■□□□□ 0.19
SQLE-201ENST00000265896 GAB1Q13480 694 aa16.26■□□□□ 0.19
SQLE-201ENST00000265896 STEAP3Q658P3 488 aa16.26■□□□□ 0.19
SQLE-201ENST00000265896 TRAF7Q6Q0C0 670 aa16.26■□□□□ 0.19
SQLE-201ENST00000265896 ZZZ3Q8IYH5 903 aa16.26■□□□□ 0.19
SQLE-201ENST00000265896 GLB1L3Q8NCI6 653 aaPredicted RBP16.26■□□□□ 0.19
SQLE-201ENST00000265896 HIST1H2AHQ96KK5 128 aa16.26■□□□□ 0.19
SQLE-201ENST00000265896 CNDP2Q96KP4 475 aaKnown RBP16.26■□□□□ 0.19
SQLE-201ENST00000265896 HIST1H2AJQ99878 128 aa16.26■□□□□ 0.19
SQLE-201ENST00000265896 NIPSNAP1Q9BPW8 284 aa16.26■□□□□ 0.19
SQLE-201ENST00000265896 H2AFJQ9BTM1 129 aa16.26■□□□□ 0.19
SQLE-201ENST00000265896 WDR12Q9GZL7 423 aaKnown RBP16.26■□□□□ 0.19
SQLE-201ENST00000265896 DUSP21Q9H596 190 aa16.26■□□□□ 0.19
SQLE-201ENST00000265896 TPT1P8Q9HAU6 139 aa16.26■□□□□ 0.19
SQLE-201ENST00000265896 RNF6Q9Y252 685 aa16.26■□□□□ 0.19
SQLE-201ENST00000265896 CCDC88CQ9P219 2028 aa16.26■□□□□ 0.19
SQLE-201ENST00000265896 GNG14A0A1W2PPG7 69 aa16.25■□□□□ 0.19
SQLE-201ENST00000265896 GFRA2O00451 464 aa16.25■□□□□ 0.19
SQLE-201ENST00000265896 TLL1O43897 1013 aa16.25■□□□□ 0.19
SQLE-201ENST00000265896 FEN1P39748 380 aaKnown RBP16.25■□□□□ 0.19
SQLE-201ENST00000265896 ALDH7A1P49419 539 aaKnown RBP16.25■□□□□ 0.19
SQLE-201ENST00000265896 ABHD18Q0P651 414 aa16.25■□□□□ 0.19
SQLE-201ENST00000265896 SELENBP1Q13228 472 aa16.25■□□□□ 0.19
SQLE-201ENST00000265896 DOC2BQ14184 412 aa16.25■□□□□ 0.19
SQLE-201ENST00000265896 KIAA1614Q5VZ46 1190 aa16.25■□□□□ 0.19
SQLE-201ENST00000265896 CMTM8Q8IZV2 173 aa16.25■□□□□ 0.19
SQLE-201ENST00000265896 AADATQ8N5Z0 425 aa16.25■□□□□ 0.19
SQLE-201ENST00000265896 SLC5A8Q8N695 610 aa16.25■□□□□ 0.19
SQLE-201ENST00000265896 CAPSLQ8WWF8 208 aa16.25■□□□□ 0.19
SQLE-201ENST00000265896 APOL4Q9BPW4 351 aa16.25■□□□□ 0.19
SQLE-201ENST00000265896 SAMD4AQ9UPU9 718 aaKnown RBP16.25■□□□□ 0.19
SQLE-201ENST00000265896 PABPN1LA6NDY0 278 aaKnown RBP16.25■□□□□ 0.19
SQLE-201ENST00000265896 TMEM88BA6NKF7 163 aa16.25■□□□□ 0.19
SQLE-201ENST00000265896 H7C0S8 307 aa16.25■□□□□ 0.19
SQLE-201ENST00000265896 SLC22A1O15245 554 aa16.25■□□□□ 0.19
SQLE-201ENST00000265896 CCNDBP1O95273 360 aa16.25■□□□□ 0.19
SQLE-201ENST00000265896 CKMP06732 381 aa16.25■□□□□ 0.19
SQLE-201ENST00000265896 ETFAP13804 333 aa16.25■□□□□ 0.19
SQLE-201ENST00000265896 RYKP34925 604 aa16.25■□□□□ 0.19
SQLE-201ENST00000265896 PPP3CCP48454 512 aa16.25■□□□□ 0.19
SQLE-201ENST00000265896 MRPL19P49406 292 aaKnown RBP16.25■□□□□ 0.19
SQLE-201ENST00000265896 GBF1Q92538 1859 aa16.25■□□□□ 0.19
SQLE-201ENST00000265896 PDLIM5Q96HC4 596 aaKnown RBP16.25■□□□□ 0.19
SQLE-201ENST00000265896 NTMT1Q9BV86 223 aa16.25■□□□□ 0.19
SQLE-201ENST00000265896 AZGP1P25311 298 aaKnown RBP16.24■□□□□ 0.19
SQLE-201ENST00000265896 AOAHP28039 575 aa16.24■□□□□ 0.19
SQLE-201ENST00000265896 DNAJA1P31689 397 aaKnown RBP16.24■□□□□ 0.19
SQLE-201ENST00000265896 TGFBR2P37173 567 aa16.24■□□□□ 0.19
SQLE-201ENST00000265896 SPAM1P38567 509 aa16.24■□□□□ 0.19
SQLE-201ENST00000265896 TIGD6Q17RP2 521 aa16.24■□□□□ 0.19
SQLE-201ENST00000265896 FRG2Q64ET8 278 aa16.24■□□□□ 0.19
SQLE-201ENST00000265896 CERS6Q6ZMG9 384 aa16.24■□□□□ 0.19
SQLE-201ENST00000265896 MMP21Q8N119 569 aa16.24■□□□□ 0.19
SQLE-201ENST00000265896 UBE2J2Q8N2K1 259 aa16.24■□□□□ 0.19
SQLE-201ENST00000265896 C1orf52Q8N6N3 182 aaKnown RBP16.24■□□□□ 0.19
SQLE-201ENST00000265896 FRG2BQ96QU4 278 aa16.24■□□□□ 0.19
SQLE-201ENST00000265896 M0R082 166 aa16.24■□□□□ 0.19
SQLE-201ENST00000265896 PTHP01270 115 aa16.24■□□□□ 0.19
SQLE-201ENST00000265896 ADRA2AP08913 450 aa16.24■□□□□ 0.19
SQLE-201ENST00000265896 AMD1P17707 334 aa16.24■□□□□ 0.19
SQLE-201ENST00000265896 SERPINB1P30740 379 aa16.24■□□□□ 0.19
SQLE-201ENST00000265896 KCNC4Q03721 635 aa16.24■□□□□ 0.19
SQLE-201ENST00000265896 TOP3AQ13472 1001 aaPredicted RBP16.24■□□□□ 0.19
SQLE-201ENST00000265896 NAE1Q13564 534 aa16.24■□□□□ 0.19
SQLE-201ENST00000265896 DMC1Q14565 340 aa16.24■□□□□ 0.19
SQLE-201ENST00000265896 BCDIN3DQ7Z5W3 292 aaKnown RBP16.24■□□□□ 0.19
SQLE-201ENST00000265896 BBS7Q8IWZ6 715 aa16.24■□□□□ 0.19
SQLE-201ENST00000265896 CELF2-AS1Q8N7Q2 184 aa16.24■□□□□ 0.19
SQLE-201ENST00000265896 SETD9Q8NE22 299 aa16.24■□□□□ 0.19
SQLE-201ENST00000265896 SORCS1Q8WY21 1168 aa16.24■□□□□ 0.19
SQLE-201ENST00000265896 NELL1Q92832 810 aa16.24■□□□□ 0.19
SQLE-201ENST00000265896 SPATA17Q96L03 361 aa16.24■□□□□ 0.19
SQLE-201ENST00000265896 RDH12Q96NR8 316 aa16.24■□□□□ 0.19
SQLE-201ENST00000265896 VN1R3Q9BXE9 311 aa16.24■□□□□ 0.19
SQLE-201ENST00000265896 XRN2Q9H0D6 950 aaKnown RBP eCLIP16.24■□□□□ 0.193e-6■■□□□ 14.1
SQLE-201ENST00000265896 ERVK13-1Q9NX77 482 aa16.24■□□□□ 0.19
SQLE-201ENST00000265896 MAP4K5Q9Y4K4 846 aa16.24■□□□□ 0.19
SQLE-201ENST00000265896 PCDHGA6Q9Y5G7 932 aa16.24■□□□□ 0.19
SQLE-201ENST00000265896 IGFBP1P08833 259 aaPredicted RBP16.23■□□□□ 0.19
SQLE-201ENST00000265896 TCEA1P23193 301 aaKnown RBP16.23■□□□□ 0.19
SQLE-201ENST00000265896 CHST14Q8NCH0 376 aa16.23■□□□□ 0.19
SQLE-201ENST00000265896 TPK1Q9H3S4 243 aa16.23■□□□□ 0.19
SQLE-201ENST00000265896 TRPS1Q9UHF7 1281 aa16.23■□□□□ 0.19
SQLE-201ENST00000265896 SNX6Q9UNH7 406 aa16.23■□□□□ 0.19
SQLE-201ENST00000265896 WNT9AO14904 365 aa16.23■□□□□ 0.19
SQLE-201ENST00000265896 KPNA5O15131 536 aa16.23■□□□□ 0.19
SQLE-201ENST00000265896 BDKRB1P46663 353 aa16.23■□□□□ 0.19
SQLE-201ENST00000265896 SERPINB10P48595 397 aa16.23■□□□□ 0.19
SQLE-201ENST00000265896 ATN1P54259 1190 aaPredicted RBP16.23■□□□□ 0.19
SQLE-201ENST00000265896 WNT3P56703 355 aa16.23■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms