RNA–Protein interactions for RNA: ENST00000263187.3

MSH4-201, Transcript of mutS homolog 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSH4, Length 3,266 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH4-201ENST00000263187 GBF1Q92538 1859 aa8.83□□□□□ -1
MSH4-201ENST00000263187 PLXNA4Q9HCM2 1894 aa8.83□□□□□ -1
MSH4-201ENST00000263187 A0A1W2PQ45 241 aaPredicted RBP8.83□□□□□ -1
MSH4-201ENST00000263187 A0A1W2PQY0 241 aa8.83□□□□□ -1
MSH4-201ENST00000263187 SLC16A6O15403 523 aa8.83□□□□□ -1
MSH4-201ENST00000263187 WBP4O75554 376 aaKnown RBP8.83□□□□□ -1
MSH4-201ENST00000263187 MYO1DO94832 1006 aa8.83□□□□□ -1
MSH4-201ENST00000263187 CCNDBP1O95273 360 aa8.83□□□□□ -1
MSH4-201ENST00000263187 AMD1P17707 334 aa8.83□□□□□ -1
MSH4-201ENST00000263187 GRK5P34947 590 aa8.83□□□□□ -1
MSH4-201ENST00000263187 CDH12P55289 794 aa8.83□□□□□ -1
MSH4-201ENST00000263187 MC1RQ01726 317 aa8.83□□□□□ -1
MSH4-201ENST00000263187 NPRL3Q12980 569 aa8.83□□□□□ -1
MSH4-201ENST00000263187 CAMK2GQ13555 558 aaPredicted RBP8.83□□□□□ -1
MSH4-201ENST00000263187 COX20Q5RI15 118 aa8.83□□□□□ -1
MSH4-201ENST00000263187 RETSATQ6NUM9 610 aa8.83□□□□□ -1
MSH4-201ENST00000263187 Q6ZVU0 165 aa8.83□□□□□ -1
MSH4-201ENST00000263187 SPATC1Q76KD6 591 aa8.83□□□□□ -1
MSH4-201ENST00000263187 CHST9Q7L1S5 443 aa8.83□□□□□ -1
MSH4-201ENST00000263187 ZZZ3Q8IYH5 903 aa8.83□□□□□ -1
MSH4-201ENST00000263187 C1orf52Q8N6N3 182 aaKnown RBP8.83□□□□□ -1
MSH4-201ENST00000263187 OR9Q2Q8NGE9 314 aa8.83□□□□□ -1
MSH4-201ENST00000263187 NELL1Q92832 810 aa8.83□□□□□ -1
MSH4-201ENST00000263187 Q96MT0 163 aa8.83□□□□□ -1
MSH4-201ENST00000263187 NRTNQ99748 197 aa8.83□□□□□ -1
MSH4-201ENST00000263187 APOL4Q9BPW4 351 aa8.83□□□□□ -1
MSH4-201ENST00000263187 COPS4Q9BT78 406 aa8.83□□□□□ -1
MSH4-201ENST00000263187 C2orf49Q9BVC5 232 aaPredicted RBP8.83□□□□□ -1
MSH4-201ENST00000263187 DCSTAMPQ9H295 470 aa8.83□□□□□ -1
MSH4-201ENST00000263187 TRIM39Q9HCM9 518 aa8.83□□□□□ -1
MSH4-201ENST00000263187 TSC22D4Q9Y3Q8 395 aa8.83□□□□□ -1
MSH4-201ENST00000263187 OR51B4Q9Y5P0 310 aa8.83□□□□□ -1
MSH4-201ENST00000263187 CYP7B1O75881 506 aa8.83□□□□□ -1
MSH4-201ENST00000263187 GABARAPO95166 117 aa8.83□□□□□ -1
MSH4-201ENST00000263187 STSP08842 583 aa8.83□□□□□ -1
MSH4-201ENST00000263187 ETFAP13804 333 aa8.83□□□□□ -1
MSH4-201ENST00000263187 DNAJA1P31689 397 aaKnown RBP8.83□□□□□ -1
MSH4-201ENST00000263187 NSG1P42857 185 aa8.83□□□□□ -1
MSH4-201ENST00000263187 BDKRB1P46663 353 aa8.83□□□□□ -1
MSH4-201ENST00000263187 GABARAPL2P60520 117 aa8.83□□□□□ -1
MSH4-201ENST00000263187 ACSM2AQ08AH3 577 aa8.83□□□□□ -1
MSH4-201ENST00000263187 GAB1Q13480 694 aa8.83□□□□□ -1
MSH4-201ENST00000263187 FAM26DQ5JW98 314 aa8.83□□□□□ -1
MSH4-201ENST00000263187 KIAA1614Q5VZ46 1190 aa8.83□□□□□ -1
MSH4-201ENST00000263187 ACSM2BQ68CK6 577 aa8.83□□□□□ -1
MSH4-201ENST00000263187 KDM4DQ6B0I6 523 aa8.83□□□□□ -1
MSH4-201ENST00000263187 HMGN2P46Q86SG4 172 aa8.83□□□□□ -1
MSH4-201ENST00000263187 TMEM150AQ86TG1 271 aa8.83□□□□□ -1
MSH4-201ENST00000263187 ENTHD1Q8IYW4 607 aa8.83□□□□□ -1
MSH4-201ENST00000263187 MFSD4AQ8N468 514 aa8.83□□□□□ -1
MSH4-201ENST00000263187 POC5Q8NA72 575 aa8.83□□□□□ -1
MSH4-201ENST00000263187 ADAMTS19Q8TE59 1207 aa8.83□□□□□ -1
MSH4-201ENST00000263187 TTLL2Q9BWV7 592 aa8.83□□□□□ -1
MSH4-201ENST00000263187 OR51E2Q9H255 320 aa8.83□□□□□ -1
MSH4-201ENST00000263187 KCTD5Q9NXV2 234 aa8.83□□□□□ -1
MSH4-201ENST00000263187 MAP4K5Q9Y4K4 846 aa8.83□□□□□ -1
MSH4-201ENST00000263187 LOC101059915A0A1B0GWI6 518 aaPredicted RBP8.82□□□□□ -1
MSH4-201ENST00000263187 A6NL46 340 aa8.82□□□□□ -1
MSH4-201ENST00000263187 AIREO43918 545 aa8.82□□□□□ -1
MSH4-201ENST00000263187 ZNF821O75541 412 aaPredicted RBP8.82□□□□□ -1
MSH4-201ENST00000263187 CCDC159P0C7I6 412 aa8.82□□□□□ -1
MSH4-201ENST00000263187 SPNP16150 400 aa8.82□□□□□ -1
MSH4-201ENST00000263187 ALOX12P18054 663 aa8.82□□□□□ -1
MSH4-201ENST00000263187 SERPINA4P29622 427 aa8.82□□□□□ -1
MSH4-201ENST00000263187 RYKP34925 604 aa8.82□□□□□ -1
MSH4-201ENST00000263187 SLC19A1P41440 591 aa8.82□□□□□ -1
MSH4-201ENST00000263187 TOP3AQ13472 1001 aaPredicted RBP8.82□□□□□ -1
MSH4-201ENST00000263187 IRF5Q13568 498 aa8.82□□□□□ -1
MSH4-201ENST00000263187 DUOXA1Q1HG43 343 aa8.82□□□□□ -1
MSH4-201ENST00000263187 INO80DQ53TQ3 878 aaPredicted RBP8.82□□□□□ -1
MSH4-201ENST00000263187 DPY19L3Q6ZPD9 716 aa8.82□□□□□ -1
MSH4-201ENST00000263187 Q6ZVL8 140 aa8.82□□□□□ -1
MSH4-201ENST00000263187 C11orf74Q86VG3 221 aa8.82□□□□□ -1
MSH4-201ENST00000263187 HEATR4Q86WZ0 1026 aa8.82□□□□□ -1
MSH4-201ENST00000263187 FAM217AQ8IXS0 508 aa8.82□□□□□ -1
MSH4-201ENST00000263187 SLC5A8Q8N695 610 aa8.82□□□□□ -1
MSH4-201ENST00000263187 SETD9Q8NE22 299 aa8.82□□□□□ -1
MSH4-201ENST00000263187 OR6Q1Q8NGQ2 317 aa8.82□□□□□ -1
MSH4-201ENST00000263187 APH1BQ8WW43 257 aa8.82□□□□□ -1
MSH4-201ENST00000263187 ALG14Q96F25 216 aa8.82□□□□□ -1
MSH4-201ENST00000263187 HTATIP2Q9BUP3 242 aa8.82□□□□□ -1
MSH4-201ENST00000263187 ATAD3AQ9NVI7 634 aa8.82□□□□□ -1
MSH4-201ENST00000263187 TMPRSS11EQ9UL52 423 aa8.82□□□□□ -1
MSH4-201ENST00000263187 RNF6Q9Y252 685 aa8.82□□□□□ -1
MSH4-201ENST00000263187 TMEM221A6NGB7 291 aa8.82□□□□□ -1
MSH4-201ENST00000263187 GABRR3A8MPY1 467 aa8.82□□□□□ -1
MSH4-201ENST00000263187 RFXAPO00287 272 aa8.82□□□□□ -1
MSH4-201ENST00000263187 WNT9AO14904 365 aa8.82□□□□□ -1
MSH4-201ENST00000263187 INPPL1O15357 1258 aa8.82□□□□□ -1
MSH4-201ENST00000263187 AQP9O43315 295 aa8.82□□□□□ -1
MSH4-201ENST00000263187 PAX3P23760 479 aa8.82□□□□□ -1
MSH4-201ENST00000263187 GABRR2P28476 465 aa8.82□□□□□ -1
MSH4-201ENST00000263187 ETV3P41162 512 aa8.82□□□□□ -1
MSH4-201ENST00000263187 CRYBA2P53672 197 aa8.82□□□□□ -1
MSH4-201ENST00000263187 DMC1Q14565 340 aa8.82□□□□□ -1
MSH4-201ENST00000263187 CCDC103Q8IW40 242 aa8.82□□□□□ -1
MSH4-201ENST00000263187 MMP21Q8N119 569 aa8.82□□□□□ -1
MSH4-201ENST00000263187 HJURPQ8NCD3 748 aaPredicted RBP8.82□□□□□ -1
MSH4-201ENST00000263187 DYNC2LI1Q8TCX1 351 aa8.82□□□□□ -1
MSH4-201ENST00000263187 CIDECQ96AQ7 238 aaPredicted RBP8.82□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms