RNA–Protein interactions for RNA: ENST00000261889.9

SNX1-201, Transcript of sorting nexin 1, humanhuman

TSL 2 BASIC

Gene SNX1, Length 3,373 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-201ENST00000261889 PSKH2Q96QS6 385 aa12.58□□□□□ -0.4
SNX1-201ENST00000261889 FAM126AQ9BYI3 521 aaPredicted RBP12.58□□□□□ -0.4
SNX1-201ENST00000261889 NUAK2Q9H093 628 aa12.58□□□□□ -0.4
SNX1-201ENST00000261889 MUC13Q9H3R2 512 aa12.58□□□□□ -0.4
SNX1-201ENST00000261889 DUSP21Q9H596 190 aa12.58□□□□□ -0.4
SNX1-201ENST00000261889 CLEC4EQ9ULY5 219 aa12.58□□□□□ -0.4
SNX1-201ENST00000261889 PCDHGA6Q9Y5G7 932 aa12.58□□□□□ -0.4
SNX1-201ENST00000261889 AGAP5A6NIR3 686 aa12.57□□□□□ -0.4
SNX1-201ENST00000261889 OR2AG2A6NM03 316 aa12.57□□□□□ -0.4
SNX1-201ENST00000261889 ARNTLO00327 626 aa12.57□□□□□ -0.4
SNX1-201ENST00000261889 KMOO15229 486 aa12.57□□□□□ -0.4
SNX1-201ENST00000261889 SCELO95171 688 aa12.57□□□□□ -0.4
SNX1-201ENST00000261889 EPORP19235 508 aa12.57□□□□□ -0.4
SNX1-201ENST00000261889 RPL9P32969 192 aaKnown RBP12.57□□□□□ -0.4
SNX1-201ENST00000261889 RPIAP49247 311 aa12.57□□□□□ -0.4
SNX1-201ENST00000261889 KIAA1614Q5VZ46 1190 aa12.57□□□□□ -0.4
SNX1-201ENST00000261889 TTC30BQ8N4P2 665 aa12.57□□□□□ -0.4
SNX1-201ENST00000261889 KCNJ9Q92806 393 aa12.57□□□□□ -0.4
SNX1-201ENST00000261889 CEP19Q96LK0 163 aa12.57□□□□□ -0.4
SNX1-201ENST00000261889 FAM193BQ96PV7 902 aaPredicted RBP12.57□□□□□ -0.4
SNX1-201ENST00000261889 MGME1Q9BQP7 344 aa12.57□□□□□ -0.4
SNX1-201ENST00000261889 IL26Q9NPH9 171 aa12.57□□□□□ -0.4
SNX1-201ENST00000261889 SNTG1Q9NSN8 517 aa12.57□□□□□ -0.4
SNX1-201ENST00000261889 PAQR5Q9NXK6 330 aaPredicted RBP12.57□□□□□ -0.4
SNX1-201ENST00000261889 CLEC2DQ9UHP7 191 aa12.57□□□□□ -0.4
SNX1-201ENST00000261889 PCDHB5Q9Y5E4 795 aa12.57□□□□□ -0.4
SNX1-201ENST00000261889 PATJQ8NI35 1801 aa12.57□□□□□ -0.4
SNX1-201ENST00000261889 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP12.57□□□□□ -0.4
SNX1-201ENST00000261889 FAM47E-STBD1D6RA91 191 aa12.57□□□□□ -0.4
SNX1-201ENST00000261889 LOC110117498-PIK3R3F6TDL0 507 aa12.57□□□□□ -0.4
SNX1-201ENST00000261889 KIAA0513O60268 411 aa12.57□□□□□ -0.4
SNX1-201ENST00000261889 ADAMTS4O75173 837 aa12.57□□□□□ -0.4
SNX1-201ENST00000261889 STK16O75716 305 aa12.57□□□□□ -0.4
SNX1-201ENST00000261889 KRT8P05787 483 aa12.57□□□□□ -0.4
SNX1-201ENST00000261889 CCDC159P0C7I6 412 aa12.57□□□□□ -0.4
SNX1-201ENST00000261889 PBLDP30039 288 aaPredicted RBP12.57□□□□□ -0.4
SNX1-201ENST00000261889 S100A5P33763 92 aa12.57□□□□□ -0.4
SNX1-201ENST00000261889 CTSKP43235 329 aa12.57□□□□□ -0.4
SNX1-201ENST00000261889 STK19P49842 368 aaPredicted RBP12.57□□□□□ -0.4
SNX1-201ENST00000261889 CDC42EP1Q00587 391 aa12.57□□□□□ -0.4
SNX1-201ENST00000261889 ZNF177Q13360 481 aaPredicted RBP12.57□□□□□ -0.4
SNX1-201ENST00000261889 CCSMST1Q4G0I0 132 aa12.57□□□□□ -0.4
SNX1-201ENST00000261889 TMCO2Q7Z6W1 182 aaPredicted RBP12.57□□□□□ -0.4
SNX1-201ENST00000261889 GOLM1Q8NBJ4 401 aa12.57□□□□□ -0.4
SNX1-201ENST00000261889 ZNF675Q8TD23 568 aa12.57□□□□□ -0.4
SNX1-201ENST00000261889 PCNPQ8WW12 178 aaKnown RBP12.57□□□□□ -0.4
SNX1-201ENST00000261889 S100ZQ8WXG8 99 aa12.57□□□□□ -0.4
SNX1-201ENST00000261889 SAMD11Q96NU1 681 aa12.57□□□□□ -0.4
SNX1-201ENST00000261889 APOL4Q9BPW4 351 aa12.57□□□□□ -0.4
SNX1-201ENST00000261889 ITPAQ9BY32 194 aa12.57□□□□□ -0.4
SNX1-201ENST00000261889 CD244Q9BZW8 370 aa12.57□□□□□ -0.4
SNX1-201ENST00000261889 MUTYHQ9UIF7 546 aa12.57□□□□□ -0.4
SNX1-201ENST00000261889 DHRS7Q9Y394 339 aa12.57□□□□□ -0.4
SNX1-201ENST00000261889 PRKAB1Q9Y478 270 aa12.57□□□□□ -0.4
SNX1-201ENST00000261889 N6AMT1Q9Y5N5 214 aa12.57□□□□□ -0.4
SNX1-201ENST00000261889 MYOFQ9NZM1 2061 aa12.57□□□□□ -0.4
SNX1-201ENST00000261889 SLC35F4A4IF30 521 aa12.56□□□□□ -0.4
SNX1-201ENST00000261889 ANKRD34BA5PLL1 514 aa12.56□□□□□ -0.4
SNX1-201ENST00000261889 M0QZQ0 153 aa12.56□□□□□ -0.4
SNX1-201ENST00000261889 CCRL2O00421 344 aa12.56□□□□□ -0.4
SNX1-201ENST00000261889 ETFAP13804 333 aa12.56□□□□□ -0.4
SNX1-201ENST00000261889 CRYBA2P53672 197 aa12.56□□□□□ -0.4
SNX1-201ENST00000261889 MC1RQ01726 317 aa12.56□□□□□ -0.4
SNX1-201ENST00000261889 SHQ1Q6PI26 577 aaKnown RBP12.56□□□□□ -0.4
SNX1-201ENST00000261889 PAMR1Q6UXH9 720 aa12.56□□□□□ -0.4
SNX1-201ENST00000261889 ADAMTSL2Q86TH1 951 aa12.56□□□□□ -0.4
SNX1-201ENST00000261889 NAGSQ8N159 534 aa12.56□□□□□ -0.4
SNX1-201ENST00000261889 GGHQ92820 318 aa12.56□□□□□ -0.4
SNX1-201ENST00000261889 TRNT1Q96Q11 434 aaKnown RBP12.56□□□□□ -0.4
SNX1-201ENST00000261889 CDK5RAP1Q96SZ6 601 aaKnown RBP12.56□□□□□ -0.4
SNX1-201ENST00000261889 MS4A12Q9NXJ0 267 aa12.56□□□□□ -0.4
SNX1-201ENST00000261889 NUDT4Q9NZJ9 180 aa12.56□□□□□ -0.4
SNX1-201ENST00000261889 PTPRDP23468 1912 aa12.56□□□□□ -0.4
SNX1-201ENST00000261889 A0A0U1RQF3 1178 aa12.56□□□□□ -0.4
SNX1-201ENST00000261889 EVPLLA8MZ36 301 aa12.56□□□□□ -0.4
SNX1-201ENST00000261889 KDELR2P33947 212 aa12.56□□□□□ -0.4
SNX1-201ENST00000261889 KIR3DL1P43629 444 aa12.56□□□□□ -0.4
SNX1-201ENST00000261889 CYP4F8P98187 520 aa12.56□□□□□ -0.4
SNX1-201ENST00000261889 SPIBQ01892 262 aa12.56□□□□□ -0.4
SNX1-201ENST00000261889 MTA1Q13330 715 aa12.56□□□□□ -0.4
SNX1-201ENST00000261889 GAB1Q13480 694 aa12.56□□□□□ -0.4
SNX1-201ENST00000261889 CCDC85BQ15834 202 aaPredicted RBP12.56□□□□□ -0.4
SNX1-201ENST00000261889 SYT6Q5T7P8 510 aaPredicted RBP12.56□□□□□ -0.4
SNX1-201ENST00000261889 IRAK1BP1Q5VVH5 260 aa12.56□□□□□ -0.4
SNX1-201ENST00000261889 KDM4DQ6B0I6 523 aa12.56□□□□□ -0.4
SNX1-201ENST00000261889 SNX20Q7Z614 316 aa12.56□□□□□ -0.4
SNX1-201ENST00000261889 APCDD1Q8J025 514 aa12.56□□□□□ -0.4
SNX1-201ENST00000261889 CLSTN3Q9BQT9 956 aa12.56□□□□□ -0.4
SNX1-201ENST00000261889 OSGIN1Q9UJX0 560 aa12.56□□□□□ -0.4
SNX1-201ENST00000261889 YARS2Q9Y2Z4 477 aaKnown RBP12.56□□□□□ -0.4
SNX1-201ENST00000261889 MAP4K5Q9Y4K4 846 aa12.56□□□□□ -0.4
SNX1-201ENST00000261889 KLK8O60259 260 aa12.56□□□□□ -0.4
SNX1-201ENST00000261889 KCNK5O95279 499 aa12.56□□□□□ -0.4
SNX1-201ENST00000261889 ETHE1O95571 254 aa12.56□□□□□ -0.4
SNX1-201ENST00000261889 CD160O95971 181 aa12.56□□□□□ -0.4
SNX1-201ENST00000261889 HPRP00739 348 aa12.56□□□□□ -0.4
SNX1-201ENST00000261889 OR2B6P58173 313 aa12.56□□□□□ -0.4
SNX1-201ENST00000261889 LSM11P83369 360 aaKnown RBP eCLIP12.56□□□□□ -0.4
SNX1-201ENST00000261889 ZSWIM9Q86XI8 627 aa12.56□□□□□ -0.4
SNX1-201ENST00000261889 TADA1Q96BN2 335 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms