RNA–Protein interactions for RNA: ENST00000261769.9

CDH1-201, Transcript of cadherin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDH1, Length 4,889 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-201ENST00000261769 TMEM130Q8N3G9 435 aa13.5□□□□□ -0.25
CDH1-201ENST00000261769 CSNK1A1LQ8N752 337 aa13.5□□□□□ -0.25
CDH1-201ENST00000261769 PIH1D2Q8WWB5 315 aa13.5□□□□□ -0.25
CDH1-201ENST00000261769 MTG2Q9H4K7 406 aa13.5□□□□□ -0.25
CDH1-201ENST00000261769 CD248Q9HCU0 757 aa13.5□□□□□ -0.25
CDH1-201ENST00000261769 DNMT3AQ9Y6K1 912 aaPredicted RBP13.5□□□□□ -0.25
CDH1-201ENST00000261769 PAPPA2Q9BXP8 1791 aa13.49□□□□□ -0.25
CDH1-201ENST00000261769 CLIC1O00299 241 aa13.49□□□□□ -0.25
CDH1-201ENST00000261769 CXCL10P02778 98 aa13.49□□□□□ -0.25
CDH1-201ENST00000261769 JUNP05412 331 aaKnown RBP13.49□□□□□ -0.25
CDH1-201ENST00000261769 KCNC1P48547 511 aa13.49□□□□□ -0.25
CDH1-201ENST00000261769 MTTPP55157 894 aa13.49□□□□□ -0.25
CDH1-201ENST00000261769 ZNF648Q5T619 568 aaPredicted RBP13.49□□□□□ -0.25
CDH1-201ENST00000261769 PSAPL1Q6NUJ1 521 aa13.49□□□□□ -0.25
CDH1-201ENST00000261769 RANBP10Q6VN20 620 aa13.49□□□□□ -0.25
CDH1-201ENST00000261769 NRROSQ86YC3 692 aa13.49□□□□□ -0.25
CDH1-201ENST00000261769 TICAM1Q8IUC6 712 aa13.49□□□□□ -0.25
CDH1-201ENST00000261769 LINC01465Q8N7H1 131 aa13.49□□□□□ -0.25
CDH1-201ENST00000261769 RBM15BQ8NDT2 890 aaKnown RBP13.49□□□□□ -0.25
CDH1-201ENST00000261769 COL21A1Q96P44 957 aa13.49□□□□□ -0.25
CDH1-201ENST00000261769 KCNC2Q96PR1 638 aa13.49□□□□□ -0.25
CDH1-201ENST00000261769 ZNF382Q96SR6 550 aa13.49□□□□□ -0.25
CDH1-201ENST00000261769 RBM4BQ9BQ04 359 aaKnown RBP13.49□□□□□ -0.25
CDH1-201ENST00000261769 RBM4Q9BWF3 364 aaKnown RBP13.49□□□□□ -0.25
CDH1-201ENST00000261769 LRRC3Q9BY71 257 aa13.49□□□□□ -0.25
CDH1-201ENST00000261769 UBE2ZQ9H832 354 aaPredicted RBP13.49□□□□□ -0.25
CDH1-201ENST00000261769 RNF11Q9Y3C5 154 aa13.49□□□□□ -0.25
CDH1-201ENST00000261769 A0A1B0GW55 424 aa13.49□□□□□ -0.25
CDH1-201ENST00000261769 SOX30O94993 753 aa13.49□□□□□ -0.25
CDH1-201ENST00000261769 STATHP02808 62 aa13.49□□□□□ -0.25
CDH1-201ENST00000261769 F11P03951 625 aa13.49□□□□□ -0.25
CDH1-201ENST00000261769 DUX4L2P0CJ85 424 aa13.49□□□□□ -0.25
CDH1-201ENST00000261769 DUX4L3P0CJ86 424 aa13.49□□□□□ -0.25
CDH1-201ENST00000261769 DUX4L4P0CJ87 422 aa13.49□□□□□ -0.25
CDH1-201ENST00000261769 DUX4L5P0CJ88 424 aa13.49□□□□□ -0.25
CDH1-201ENST00000261769 DUX4L6P0CJ89 424 aa13.49□□□□□ -0.25
CDH1-201ENST00000261769 DUX4L7P0CJ90 424 aa13.49□□□□□ -0.25
CDH1-201ENST00000261769 ENDOUP21128 410 aaKnown RBP13.49□□□□□ -0.25
CDH1-201ENST00000261769 HYAL2Q12891 473 aa13.49□□□□□ -0.25
CDH1-201ENST00000261769 GPR68Q15743 365 aa13.49□□□□□ -0.25
CDH1-201ENST00000261769 TMPRSS11AQ6ZMR5 421 aa13.49□□□□□ -0.25
CDH1-201ENST00000261769 ADGRD2Q7Z7M1 963 aa13.49□□□□□ -0.25
CDH1-201ENST00000261769 ADGRG6Q86SQ4 1221 aa13.49□□□□□ -0.25
CDH1-201ENST00000261769 TSPAN33Q86UF1 283 aa13.49□□□□□ -0.25
CDH1-201ENST00000261769 OR4C6Q8NH72 309 aa13.49□□□□□ -0.25
CDH1-201ENST00000261769 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP13.49□□□□□ -0.25
CDH1-201ENST00000261769 LDAHQ9H6V9 325 aa13.49□□□□□ -0.25
CDH1-201ENST00000261769 SMURF2Q9HAU4 748 aa13.49□□□□□ -0.25
CDH1-201ENST00000261769 DUX4Q9UBX2 424 aa13.49□□□□□ -0.25
CDH1-201ENST00000261769 DLGAP4Q9Y2H0 992 aa13.49□□□□□ -0.25
CDH1-201ENST00000261769 TCHHQ07283 1943 aa13.49□□□□□ -0.25
CDH1-201ENST00000261769 SDC3O75056 442 aa13.49□□□□□ -0.25
CDH1-201ENST00000261769 CCNB2O95067 398 aa13.49□□□□□ -0.25
CDH1-201ENST00000261769 MYOGP15173 224 aa13.49□□□□□ -0.25
CDH1-201ENST00000261769 CD38P28907 300 aa13.49□□□□□ -0.25
CDH1-201ENST00000261769 SLC6A4P31645 630 aa13.49□□□□□ -0.25
CDH1-201ENST00000261769 CDK9P50750 372 aaKnown RBP13.49□□□□□ -0.25
CDH1-201ENST00000261769 CACNA2D1P54289 1103 aa13.49□□□□□ -0.25
CDH1-201ENST00000261769 ARSFP54793 590 aa13.49□□□□□ -0.25
CDH1-201ENST00000261769 DNAJB13P59910 316 aa13.49□□□□□ -0.25
CDH1-201ENST00000261769 SLC18A2Q05940 514 aa13.49□□□□□ -0.25
CDH1-201ENST00000261769 ELOAQ14241 798 aaKnown RBP13.49□□□□□ -0.25
CDH1-201ENST00000261769 MZT2AQ6P582 158 aa13.49□□□□□ -0.25
CDH1-201ENST00000261769 STMN3Q9NZ72 180 aa13.49□□□□□ -0.25
CDH1-201ENST00000261769 ZNF726A6NNF4 738 aa13.48□□□□□ -0.25
CDH1-201ENST00000261769 ANPEPP15144 967 aa13.48□□□□□ -0.25
CDH1-201ENST00000261769 AHCYP23526 432 aa13.48□□□□□ -0.25
CDH1-201ENST00000261769 ELF3P78545 371 aaPredicted RBP13.48□□□□□ -0.25
CDH1-201ENST00000261769 SCARB2Q14108 478 aa13.48□□□□□ -0.25
CDH1-201ENST00000261769 ZNF267Q14586 743 aaPredicted RBP13.48□□□□□ -0.25
CDH1-201ENST00000261769 HERC3Q15034 1050 aa13.48□□□□□ -0.25
CDH1-201ENST00000261769 DUSP6Q16828 381 aa13.48□□□□□ -0.25
CDH1-201ENST00000261769 CXXC5Q7LFL8 322 aaKnown RBP13.48□□□□□ -0.25
CDH1-201ENST00000261769 NPAS3Q8IXF0 933 aa13.48□□□□□ -0.25
CDH1-201ENST00000261769 GSTCDQ8NEC7 633 aa13.48□□□□□ -0.25
CDH1-201ENST00000261769 OR6C4Q8NGE1 309 aa13.48□□□□□ -0.25
CDH1-201ENST00000261769 MOAP1Q96BY2 351 aa13.48□□□□□ -0.25
CDH1-201ENST00000261769 SH3GL3Q99963 347 aa13.48□□□□□ -0.25
CDH1-201ENST00000261769 GALNT8Q9NY28 637 aa13.48□□□□□ -0.25
CDH1-201ENST00000261769 KIR2DS5A0A0G2JLQ3 304 aa13.48□□□□□ -0.25
CDH1-201ENST00000261769 A0A0G2JNG1 304 aa13.48□□□□□ -0.25
CDH1-201ENST00000261769 KIR2DS3K7RE56 304 aa13.48□□□□□ -0.25
CDH1-201ENST00000261769 GSC2O15499 205 aa13.48□□□□□ -0.25
CDH1-201ENST00000261769 FHP07954 510 aa13.48□□□□□ -0.25
CDH1-201ENST00000261769 MYCLP1P12525 358 aaPredicted RBP13.48□□□□□ -0.25
CDH1-201ENST00000261769 ZNF823P16415 610 aa13.48□□□□□ -0.25
CDH1-201ENST00000261769 RAPSNQ13702 412 aa13.48□□□□□ -0.25
CDH1-201ENST00000261769 KIR2DS5Q14953 304 aa13.48□□□□□ -0.25
CDH1-201ENST00000261769 TRIQKQ629K1 86 aa13.48□□□□□ -0.25
CDH1-201ENST00000261769 RTN4RL1Q86UN2 441 aaPredicted RBP13.48□□□□□ -0.25
CDH1-201ENST00000261769 PQLC1Q8N2U9 271 aa13.48□□□□□ -0.25
CDH1-201ENST00000261769 FAM13CQ8NE31 585 aa13.48□□□□□ -0.25
CDH1-201ENST00000261769 EFHD2Q96C19 240 aaPredicted RBP13.48□□□□□ -0.25
CDH1-201ENST00000261769 HDHD2Q9H0R4 259 aa13.48□□□□□ -0.25
CDH1-201ENST00000261769 CRISPLD1Q9H336 500 aa13.48□□□□□ -0.25
CDH1-201ENST00000261769 PRSS51A0A1B0GVH4 220 aa13.48□□□□□ -0.25
CDH1-201ENST00000261769 PLK4O00444 970 aa13.48□□□□□ -0.25
CDH1-201ENST00000261769 BTN3A3O00478 584 aa13.48□□□□□ -0.25
CDH1-201ENST00000261769 SOX9P48436 509 aa13.48□□□□□ -0.25
CDH1-201ENST00000261769 SRP54P61011 504 aaKnown RBP13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms