RNA–Protein interactions for RNA: ENST00000261726.10

CUX2-201, Transcript of cut like homeobox 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CUX2, Length 6,844 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX2-201ENST00000261726 NUDT6P53370 316 aa13.92□□□□□ -0.18
CUX2-201ENST00000261726 PER3P56645 1201 aa13.92□□□□□ -0.18
CUX2-201ENST00000261726 PRAMEF14Q5SWL7 426 aa13.92□□□□□ -0.18
CUX2-201ENST00000261726 PRAMEF13Q5VWM6 474 aa13.92□□□□□ -0.18
CUX2-201ENST00000261726 ANO7Q6IWH7 933 aa13.92□□□□□ -0.18
CUX2-201ENST00000261726 ZNF662Q6ZS27 426 aa13.92□□□□□ -0.18
CUX2-201ENST00000261726 CERS5Q8N5B7 392 aa13.92□□□□□ -0.18
CUX2-201ENST00000261726 FUZQ9BT04 418 aa13.92□□□□□ -0.18
CUX2-201ENST00000261726 PLAGL1Q9UM63 463 aa13.92□□□□□ -0.18
CUX2-201ENST00000261726 NIPSNAP2O75323 286 aa13.92□□□□□ -0.18
CUX2-201ENST00000261726 MSL3P1P0C860 447 aa13.92□□□□□ -0.18
CUX2-201ENST00000261726 TUBB3Q13509 450 aa13.92□□□□□ -0.18
CUX2-201ENST00000261726 CASTOR1Q8WTX7 329 aa13.92□□□□□ -0.18
CUX2-201ENST00000261726 CAMK1GQ96NX5 476 aa13.92□□□□□ -0.18
CUX2-201ENST00000261726 ARHGAP9Q9BRR9 750 aa13.92□□□□□ -0.18
CUX2-201ENST00000261726 DPAGT1Q9H3H5 408 aa13.92□□□□□ -0.18
CUX2-201ENST00000261726 TAC3Q9UHF0 121 aa13.92□□□□□ -0.18
CUX2-201ENST00000261726 KCNS2Q9ULS6 477 aa13.92□□□□□ -0.18
CUX2-201ENST00000261726 CDC14AQ9UNH5 594 aa13.92□□□□□ -0.18
CUX2-201ENST00000261726 TEX13CA0A0J9YWL9 993 aa13.91□□□□□ -0.18
CUX2-201ENST00000261726 GPR25O00155 361 aa13.91□□□□□ -0.18
CUX2-201ENST00000261726 RPL10P27635 214 aaKnown RBP13.91□□□□□ -0.18
CUX2-201ENST00000261726 PHOSPHO1Q8TCT1 267 aa13.91□□□□□ -0.18
CUX2-201ENST00000261726 HIF3AQ9Y2N7 669 aa13.91□□□□□ -0.18
CUX2-201ENST00000261726 REXO2Q9Y3B8 237 aaKnown RBP13.91□□□□□ -0.18
CUX2-201ENST00000261726 HTR3EA5X5Y0 456 aa13.91□□□□□ -0.18
CUX2-201ENST00000261726 HMGN1P05114 100 aa13.91□□□□□ -0.18
CUX2-201ENST00000261726 CYP3A5P20815 502 aa13.91□□□□□ -0.18
CUX2-201ENST00000261726 RHEBQ15382 184 aa13.91□□□□□ -0.18
CUX2-201ENST00000261726 RBM20Q5T481 1227 aaKnown RBP13.91□□□□□ -0.18
CUX2-201ENST00000261726 OR4F3Q6IEY1 312 aa13.91□□□□□ -0.18
CUX2-201ENST00000261726 MFSD2AQ8NA29 543 aa13.91□□□□□ -0.18
CUX2-201ENST00000261726 OR6N1Q8NGY5 312 aa13.91□□□□□ -0.18
CUX2-201ENST00000261726 SH3RF2Q8TEC5 729 aa13.91□□□□□ -0.18
CUX2-201ENST00000261726 MND1Q9BWT6 205 aa13.91□□□□□ -0.18
CUX2-201ENST00000261726 CADM1Q9BY67 442 aaKnown RBP13.91□□□□□ -0.18
CUX2-201ENST00000261726 VPS29Q9UBQ0 182 aa13.91□□□□□ -0.18
CUX2-201ENST00000261726 BCL9O00512 1426 aa13.91□□□□□ -0.18
CUX2-201ENST00000261726 A0A1B0GVC2 190 aa13.91□□□□□ -0.18
CUX2-201ENST00000261726 GNG2P59768 71 aa13.91□□□□□ -0.18
CUX2-201ENST00000261726 ADAM15Q13444 863 aa13.91□□□□□ -0.18
CUX2-201ENST00000261726 HGSNATQ68CP4 663 aa13.91□□□□□ -0.18
CUX2-201ENST00000261726 SCAMP5Q8TAC9 235 aa13.91□□□□□ -0.18
CUX2-201ENST00000261726 SLC22A18Q96BI1 424 aa13.91□□□□□ -0.18
CUX2-201ENST00000261726 SNX27Q96L92 541 aa13.91□□□□□ -0.18
CUX2-201ENST00000261726 BEX2Q9BXY8 128 aa13.91□□□□□ -0.18
CUX2-201ENST00000261726 BEX1Q9HBH7 125 aa13.91□□□□□ -0.18
CUX2-201ENST00000261726 C14orf105Q9NVL8 296 aa13.91□□□□□ -0.18
CUX2-201ENST00000261726 FLRT1Q9NZU1 646 aa13.91□□□□□ -0.18
CUX2-201ENST00000261726 GDF10P55107 478 aa13.91□□□□□ -0.18
CUX2-201ENST00000261726 TAS2R39P59534 338 aa13.91□□□□□ -0.18
CUX2-201ENST00000261726 EVX2Q03828 476 aa13.91□□□□□ -0.18
CUX2-201ENST00000261726 PSKH2Q96QS6 385 aa13.91□□□□□ -0.18
CUX2-201ENST00000261726 EPYCQ99645 322 aa13.91□□□□□ -0.18
CUX2-201ENST00000261726 HERC2P3Q9BVR0 1158 aa13.91□□□□□ -0.18
CUX2-201ENST00000261726 POMPQ9Y244 141 aa13.91□□□□□ -0.18
CUX2-201ENST00000261726 FAM170BA6NMN3 283 aa13.91□□□□□ -0.18
CUX2-201ENST00000261726 ENTPD1P49961 510 aa13.91□□□□□ -0.18
CUX2-201ENST00000261726 GDPD4Q6W3E5 623 aa13.91□□□□□ -0.18
CUX2-201ENST00000261726 SLC44A3Q8N4M1 653 aa13.91□□□□□ -0.18
CUX2-201ENST00000261726 SETD7Q8WTS6 366 aaKnown RBP13.91□□□□□ -0.18
CUX2-201ENST00000261726 PNPLA2Q96AD5 504 aa13.91□□□□□ -0.18
CUX2-201ENST00000261726 CDH1P12830 882 aa13.9□□□□□ -0.18
CUX2-201ENST00000261726 ANXA8P13928 327 aa13.9□□□□□ -0.18
CUX2-201ENST00000261726 GDI1P31150 447 aa13.9□□□□□ -0.18
CUX2-201ENST00000261726 DNAJA1P31689 397 aaKnown RBP13.9□□□□□ -0.18
CUX2-201ENST00000261726 CLCNKAP51800 687 aa13.9□□□□□ -0.18
CUX2-201ENST00000261726 GRIK2Q13002 908 aa13.9□□□□□ -0.18
CUX2-201ENST00000261726 WACQ9BTA9 647 aa13.9□□□□□ -0.18
CUX2-201ENST00000261726 ASPNQ9BXN1 380 aa13.9□□□□□ -0.18
CUX2-201ENST00000261726 BTBD19C9JJ37 291 aa13.9□□□□□ -0.18
CUX2-201ENST00000261726 PDLIM1O00151 329 aa13.9□□□□□ -0.18
CUX2-201ENST00000261726 CLIC1O00299 241 aa13.9□□□□□ -0.18
CUX2-201ENST00000261726 VILLO15195 856 aa13.9□□□□□ -0.18
CUX2-201ENST00000261726 LDB2O43679 373 aa13.9□□□□□ -0.18
CUX2-201ENST00000261726 H1F0P07305 194 aaKnown RBP13.9□□□□□ -0.18
CUX2-201ENST00000261726 BCKDHAP12694 445 aa13.9□□□□□ -0.18
CUX2-201ENST00000261726 GLP1RP43220 463 aa13.9□□□□□ -0.18
CUX2-201ENST00000261726 SLC37A3Q8NCC5 494 aa13.9□□□□□ -0.18
CUX2-201ENST00000261726 NCSTNQ92542 709 aa13.9□□□□□ -0.18
CUX2-201ENST00000261726 TMEM41AQ96HV5 264 aa13.9□□□□□ -0.18
CUX2-201ENST00000261726 HNRNPABQ99729 332 aaKnown RBP13.9□□□□□ -0.18
CUX2-201ENST00000261726 GRHPRQ9UBQ7 328 aa13.9□□□□□ -0.18
CUX2-201ENST00000261726 DISP2A7MBM2 1401 aa13.9□□□□□ -0.18
CUX2-201ENST00000261726 M0R129 80 aa13.9□□□□□ -0.18
CUX2-201ENST00000261726 FXYD6P3P58550 94 aa13.9□□□□□ -0.18
CUX2-201ENST00000261726 MERTKQ12866 999 aa13.9□□□□□ -0.18
CUX2-201ENST00000261726 MFSD5Q6N075 450 aa13.9□□□□□ -0.18
CUX2-201ENST00000261726 C3orf33Q6P1S2 294 aa13.9□□□□□ -0.18
CUX2-201ENST00000261726 VTCN1Q7Z7D3 282 aa13.9□□□□□ -0.18
CUX2-201ENST00000261726 ZNF709Q8N972 641 aa13.9□□□□□ -0.18
CUX2-201ENST00000261726 SMARCD2Q92925 531 aa13.9□□□□□ -0.18
CUX2-201ENST00000261726 LRRC3Q9BY71 257 aa13.9□□□□□ -0.18
CUX2-201ENST00000261726 TMEM88BA6NKF7 163 aa13.9□□□□□ -0.18
CUX2-201ENST00000261726 CCRL2O00421 344 aa13.9□□□□□ -0.18
CUX2-201ENST00000261726 ABLIM1O14639 778 aa13.9□□□□□ -0.18
CUX2-201ENST00000261726 LILRA4P59901 499 aa13.9□□□□□ -0.18
CUX2-201ENST00000261726 HERVK_113P63132 956 aa13.9□□□□□ -0.18
CUX2-201ENST00000261726 PPP1R8Q12972 351 aaKnown RBP13.9□□□□□ -0.18
CUX2-201ENST00000261726 AIMP2Q13155 320 aaKnown RBP13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms