RNA–Protein interactions for RNA: ENST00000261584.8

PALB2-201, Transcript of partner and localizer of BRCA2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PALB2, Length 4,003 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2-201ENST00000261584 GADD45GO95257 159 aa9.8□□□□□ -0.84
PALB2-201ENST00000261584 SPNP16150 400 aa9.8□□□□□ -0.84
PALB2-201ENST00000261584 DNAJA1P31689 397 aaKnown RBP9.8□□□□□ -0.84
PALB2-201ENST00000261584 KDELR2P33947 212 aa9.8□□□□□ -0.84
PALB2-201ENST00000261584 NNMTP40261 264 aa9.8□□□□□ -0.84
PALB2-201ENST00000261584 GSTM5P46439 218 aa9.8□□□□□ -0.84
PALB2-201ENST00000261584 ABATP80404 500 aa9.8□□□□□ -0.84
PALB2-201ENST00000261584 MC1RQ01726 317 aa9.8□□□□□ -0.84
PALB2-201ENST00000261584 SEMA3BQ13214 749 aa9.8□□□□□ -0.84
PALB2-201ENST00000261584 SNAPC1Q16533 368 aa9.8□□□□□ -0.84
PALB2-201ENST00000261584 KIAA1161Q6NSJ0 714 aa9.8□□□□□ -0.84
PALB2-201ENST00000261584 PAMR1Q6UXH9 720 aa9.8□□□□□ -0.84
PALB2-201ENST00000261584 GTF2H4Q92759 462 aa9.8□□□□□ -0.84
PALB2-201ENST00000261584 TMEM169Q96HH4 297 aa9.8□□□□□ -0.84
PALB2-201ENST00000261584 OSBPL10Q9BXB5 764 aa9.8□□□□□ -0.84
PALB2-201ENST00000261584 NUSAP1Q9BXS6 441 aaKnown RBP9.8□□□□□ -0.84
PALB2-201ENST00000261584 CHIAQ9BZP6 476 aa9.8□□□□□ -0.84
PALB2-201ENST00000261584 VNN3Q9NY84 501 aa9.8□□□□□ -0.84
PALB2-201ENST00000261584 RIMKLBQ9ULI2 386 aa9.8□□□□□ -0.84
PALB2-201ENST00000261584 H0YAE9 185 aa9.8□□□□□ -0.84
PALB2-201ENST00000261584 TEX46H3BTG2 121 aa9.8□□□□□ -0.84
PALB2-201ENST00000261584 PRAMEF11O60813 436 aa9.8□□□□□ -0.84
PALB2-201ENST00000261584 HOXB8P17481 243 aaPredicted RBP9.8□□□□□ -0.84
PALB2-201ENST00000261584 PSMA1P25786 263 aaKnown RBP9.8□□□□□ -0.84
PALB2-201ENST00000261584 FLT3LGP49771 235 aa9.8□□□□□ -0.84
PALB2-201ENST00000261584 ANGPT1Q15389 498 aa9.8□□□□□ -0.84
PALB2-201ENST00000261584 ADNP2Q6IQ32 1131 aa9.8□□□□□ -0.84
PALB2-201ENST00000261584 RD3Q7Z3Z2 195 aa9.8□□□□□ -0.84
PALB2-201ENST00000261584 NRARPQ7Z6K4 114 aa9.8□□□□□ -0.84
PALB2-201ENST00000261584 ZSCAN2Q7Z7L9 614 aaPredicted RBP9.8□□□□□ -0.84
PALB2-201ENST00000261584 ASZ1Q8WWH4 475 aa9.8□□□□□ -0.84
PALB2-201ENST00000261584 IRGQQ8WZA9 623 aa9.8□□□□□ -0.84
PALB2-201ENST00000261584 SCLYQ96I15 445 aa9.8□□□□□ -0.84
PALB2-201ENST00000261584 ZFP3Q96NJ6 502 aa9.8□□□□□ -0.84
PALB2-201ENST00000261584 CDK5RAP1Q96SZ6 601 aaKnown RBP9.8□□□□□ -0.84
PALB2-201ENST00000261584 TMED9Q9BVK6 235 aa9.8□□□□□ -0.84
PALB2-201ENST00000261584 TRIM45Q9H8W5 580 aaPredicted RBP9.8□□□□□ -0.84
PALB2-201ENST00000261584 GPR52Q9Y2T5 361 aa9.8□□□□□ -0.84
PALB2-201ENST00000261584 BTAF1O14981 1849 aa9.8□□□□□ -0.84
PALB2-201ENST00000261584 CACNA1IQ9P0X4 2223 aa9.8□□□□□ -0.84
PALB2-201ENST00000261584 ZSCAN5BA6NJL1 495 aa9.79□□□□□ -0.84
PALB2-201ENST00000261584 BTN3A3O00478 584 aa9.79□□□□□ -0.84
PALB2-201ENST00000261584 ADAMDEC1O15204 470 aa9.79□□□□□ -0.84
PALB2-201ENST00000261584 SLC28A2O43868 658 aa9.79□□□□□ -0.84
PALB2-201ENST00000261584 C6orf47O95873 294 aa9.79□□□□□ -0.84
PALB2-201ENST00000261584 SERPINA4P29622 427 aa9.79□□□□□ -0.84
PALB2-201ENST00000261584 SGSHP51688 502 aa9.79□□□□□ -0.84
PALB2-201ENST00000261584 EXOC3L2Q2M3D2 409 aa9.79□□□□□ -0.84
PALB2-201ENST00000261584 LRRC66Q68CR7 880 aa9.79□□□□□ -0.84
PALB2-201ENST00000261584 C22orf42Q6IC83 251 aa9.79□□□□□ -0.84
PALB2-201ENST00000261584 SPRED1Q7Z699 444 aa9.79□□□□□ -0.84
PALB2-201ENST00000261584 C11orf65Q8NCR3 313 aa9.79□□□□□ -0.84
PALB2-201ENST00000261584 DBF4BQ8NFT6 615 aa9.79□□□□□ -0.84
PALB2-201ENST00000261584 SORCS1Q8WY21 1168 aa9.79□□□□□ -0.84
PALB2-201ENST00000261584 SMG7Q92540 1137 aaKnown RBP9.79□□□□□ -0.84
PALB2-201ENST00000261584 TANKQ92844 425 aa9.79□□□□□ -0.84
PALB2-201ENST00000261584 DNASE1L2Q92874 299 aa9.79□□□□□ -0.84
PALB2-201ENST00000261584 ASPNQ9BXN1 380 aa9.79□□□□□ -0.84
PALB2-201ENST00000261584 NTN4Q9HB63 628 aa9.79□□□□□ -0.84
PALB2-201ENST00000261584 PLSCR3Q9NRY6 295 aa9.79□□□□□ -0.84
PALB2-201ENST00000261584 ZNF225Q9UK10 706 aa9.79□□□□□ -0.84
PALB2-201ENST00000261584 SSR3Q9UNL2 185 aa9.79□□□□□ -0.84
PALB2-201ENST00000261584 GPSM3Q9Y4H4 160 aa9.79□□□□□ -0.84
PALB2-201ENST00000261584 COL1A2P08123 1366 aa9.79□□□□□ -0.84
PALB2-201ENST00000261584 PRR23D1E9PI22 279 aaPredicted RBP9.79□□□□□ -0.84
PALB2-201ENST00000261584 DLGAP1O14490 977 aa9.79□□□□□ -0.84
PALB2-201ENST00000261584 TSPAN4O14817 238 aa9.79□□□□□ -0.84
PALB2-201ENST00000261584 WBP4O75554 376 aaKnown RBP9.79□□□□□ -0.84
PALB2-201ENST00000261584 PRR23D2P0DMB1 279 aaPredicted RBP9.79□□□□□ -0.84
PALB2-201ENST00000261584 NR2F1P10589 423 aa9.79□□□□□ -0.84
PALB2-201ENST00000261584 SLC6A4P31645 630 aa9.79□□□□□ -0.84
PALB2-201ENST00000261584 DAPP51397 102 aa9.79□□□□□ -0.84
PALB2-201ENST00000261584 MANFP55145 182 aaKnown RBP9.79□□□□□ -0.84
PALB2-201ENST00000261584 YBEYP58557 167 aaPredicted RBP9.79□□□□□ -0.84
PALB2-201ENST00000261584 PLEKHG6Q3KR16 790 aa9.79□□□□□ -0.84
PALB2-201ENST00000261584 CFAP206Q8IYR0 622 aa9.79□□□□□ -0.84
PALB2-201ENST00000261584 CMTM8Q8IZV2 173 aa9.79□□□□□ -0.84
PALB2-201ENST00000261584 NAGSQ8N159 534 aa9.79□□□□□ -0.84
PALB2-201ENST00000261584 BTN2A2Q8WVV5 523 aa9.79□□□□□ -0.84
PALB2-201ENST00000261584 PPCDCQ96CD2 204 aa9.79□□□□□ -0.84
PALB2-201ENST00000261584 ARSGQ96EG1 525 aa9.79□□□□□ -0.84
PALB2-201ENST00000261584 DNAJA3Q96EY1 480 aa9.79□□□□□ -0.84
PALB2-201ENST00000261584 SORBS1Q9BX66 1292 aaKnown RBP9.79□□□□□ -0.84
PALB2-201ENST00000261584 DNAJC11Q9NVH1 559 aa9.79□□□□□ -0.84
PALB2-201ENST00000261584 PTGFRNQ9P2B2 879 aa9.79□□□□□ -0.84
PALB2-201ENST00000261584 GTF2A1LQ9UNN4 478 aa9.79□□□□□ -0.84
PALB2-201ENST00000261584 PPP2R3BQ9Y5P8 575 aa9.79□□□□□ -0.84
PALB2-201ENST00000261584 ZFC3H1O60293 1989 aaKnown RBP9.79□□□□□ -0.84
PALB2-201ENST00000261584 DNAJC25-GNG10A0A024R161 153 aa9.79□□□□□ -0.84
PALB2-201ENST00000261584 TRAV6A0A075B6T7 132 aa9.79□□□□□ -0.84
PALB2-201ENST00000261584 E2F3O00716 465 aa9.79□□□□□ -0.84
PALB2-201ENST00000261584 SGTAO43765 313 aa9.79□□□□□ -0.84
PALB2-201ENST00000261584 ERN1O75460 977 aaKnown RBP9.79□□□□□ -0.84
PALB2-201ENST00000261584 KLK1P06870 262 aa9.79□□□□□ -0.84
PALB2-201ENST00000261584 CA5AP35218 305 aa9.79□□□□□ -0.84
PALB2-201ENST00000261584 HNRNPA0Q13151 305 aaKnown RBP9.79□□□□□ -0.84
PALB2-201ENST00000261584 IHHQ14623 411 aa9.79□□□□□ -0.84
PALB2-201ENST00000261584 TRIM40Q6P9F5 258 aa9.79□□□□□ -0.84
PALB2-201ENST00000261584 RNF130Q86XS8 419 aa9.79□□□□□ -0.84
PALB2-201ENST00000261584 LRRC49Q8IUZ0 686 aa9.79□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms