RNA–Protein interactions for RNA: ENST00000260054.8

CCDC90B-201, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 2

Gene CCDC90B, Length 1,688 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-201ENST00000260054 HAO1Q9UJM8 370 aa15.16■□□□□ 0.02
CCDC90B-201ENST00000260054 CDV3Q9UKY7 258 aaKnown RBP15.16■□□□□ 0.02
CCDC90B-201ENST00000260054 RAP2CQ9Y3L5 183 aa15.16■□□□□ 0.02
CCDC90B-201ENST00000260054 COL27A1Q8IZC6 1860 aaPredicted RBP15.16■□□□□ 0.02
CCDC90B-201ENST00000260054 FFAR3O14843 346 aa15.16■□□□□ 0.02
CCDC90B-201ENST00000260054 TOX3O15405 576 aaPredicted RBP15.16■□□□□ 0.02
CCDC90B-201ENST00000260054 GPR42O15529 346 aa15.16■□□□□ 0.02
CCDC90B-201ENST00000260054 ZBTB11O95625 1053 aaPredicted RBP15.16■□□□□ 0.02
CCDC90B-201ENST00000260054 CAPN1P07384 714 aa15.16■□□□□ 0.02
CCDC90B-201ENST00000260054 HGFP14210 728 aa15.16■□□□□ 0.02
CCDC90B-201ENST00000260054 HNF4AP41235 474 aa15.16■□□□□ 0.02
CCDC90B-201ENST00000260054 SEPHS1P49903 392 aa15.16■□□□□ 0.02
CCDC90B-201ENST00000260054 CLDN6P56747 220 aa15.16■□□□□ 0.02
CCDC90B-201ENST00000260054 NAA25Q14CX7 972 aa15.16■□□□□ 0.02
CCDC90B-201ENST00000260054 ZRSR2Q15696 482 aaKnown RBP15.16■□□□□ 0.02
CCDC90B-201ENST00000260054 TCHHL1Q5QJ38 904 aaPredicted RBP15.16■□□□□ 0.02
CCDC90B-201ENST00000260054 ADNP2Q6IQ32 1131 aa15.16■□□□□ 0.02
CCDC90B-201ENST00000260054 FBXO42Q6P3S6 717 aa15.16■□□□□ 0.02
CCDC90B-201ENST00000260054 ARHGAP22Q7Z5H3 698 aa15.16■□□□□ 0.02
CCDC90B-201ENST00000260054 RCBTB1Q8NDN9 531 aa15.16■□□□□ 0.02
CCDC90B-201ENST00000260054 C7orf26Q96N11 449 aa15.16■□□□□ 0.02
CCDC90B-201ENST00000260054 ILKAPQ9H0C8 392 aaPredicted RBP15.16■□□□□ 0.02
CCDC90B-201ENST00000260054 ZNF768Q9H5H4 540 aaKnown RBP15.16■□□□□ 0.02
CCDC90B-201ENST00000260054 PILRAQ9UKJ1 303 aa15.16■□□□□ 0.02
CCDC90B-201ENST00000260054 ZNF490Q9ULM2 529 aaPredicted RBP15.16■□□□□ 0.02
CCDC90B-201ENST00000260054 TIMM22Q9Y584 194 aa15.16■□□□□ 0.02
CCDC90B-201ENST00000260054 AZIN1O14977 448 aa15.15■□□□□ 0.02
CCDC90B-201ENST00000260054 LCMT2O60294 686 aaKnown RBP15.15■□□□□ 0.02
CCDC90B-201ENST00000260054 DKK1O94907 266 aa15.15■□□□□ 0.02
CCDC90B-201ENST00000260054 SNUPNO95149 360 aaKnown RBP15.15■□□□□ 0.02
CCDC90B-201ENST00000260054 ENO1P06733 434 aaKnown RBP15.15■□□□□ 0.02
CCDC90B-201ENST00000260054 FGF4P08620 206 aa15.15■□□□□ 0.02
CCDC90B-201ENST00000260054 ANKRD34CP0C6C1 535 aa15.15■□□□□ 0.02
CCDC90B-201ENST00000260054 FTH1P19P0C7X4 201 aa15.15■□□□□ 0.02
CCDC90B-201ENST00000260054 CEACAM1P13688 526 aa15.15■□□□□ 0.02
CCDC90B-201ENST00000260054 BCL6P41182 706 aa15.15■□□□□ 0.02
CCDC90B-201ENST00000260054 SIM1P81133 766 aaPredicted RBP15.15■□□□□ 0.02
CCDC90B-201ENST00000260054 ZFP36L1Q07352 338 aaKnown RBP15.15■□□□□ 0.02
CCDC90B-201ENST00000260054 PAGE2BQ5JRK9 111 aa15.15■□□□□ 0.02
CCDC90B-201ENST00000260054 KANK2Q63ZY3 851 aa15.15■□□□□ 0.02
CCDC90B-201ENST00000260054 DHRS13Q6UX07 377 aa15.15■□□□□ 0.02
CCDC90B-201ENST00000260054 TMIGD1Q6UXZ0 262 aa15.15■□□□□ 0.02
CCDC90B-201ENST00000260054 KRT78Q8N1N4 520 aa15.15■□□□□ 0.02
CCDC90B-201ENST00000260054 ANKRD53Q8N9V6 530 aa15.15■□□□□ 0.02
CCDC90B-201ENST00000260054 METTL6Q8TCB7 284 aa15.15■□□□□ 0.02
CCDC90B-201ENST00000260054 KLHL6Q8WZ60 621 aa15.15■□□□□ 0.02
CCDC90B-201ENST00000260054 TCTN2Q96GX1 697 aa15.15■□□□□ 0.02
CCDC90B-201ENST00000260054 SLC41A2Q96JW4 573 aa15.15■□□□□ 0.02
CCDC90B-201ENST00000260054 SARGQ9BW04 601 aa15.15■□□□□ 0.02
CCDC90B-201ENST00000260054 PNPOQ9NVS9 261 aa15.15■□□□□ 0.02
CCDC90B-201ENST00000260054 SOHLH2Q9NX45 425 aa15.15■□□□□ 0.02
CCDC90B-201ENST00000260054 BTRCQ9Y297 605 aa15.15■□□□□ 0.02
CCDC90B-201ENST00000260054 EPB41L3Q9Y2J2 1087 aaPredicted RBP15.15■□□□□ 0.02
CCDC90B-201ENST00000260054 FIS1Q9Y3D6 152 aa15.15■□□□□ 0.02
CCDC90B-201ENST00000260054 TRAF6Q9Y4K3 522 aa15.15■□□□□ 0.02
CCDC90B-201ENST00000260054 TRBC2A0A5B9 178 aa15.14■□□□□ 0.01
CCDC90B-201ENST00000260054 H0YIV9 168 aa15.14■□□□□ 0.01
CCDC90B-201ENST00000260054 HCRTR1O43613 425 aa15.14■□□□□ 0.01
CCDC90B-201ENST00000260054 EZRP15311 586 aaKnown RBP15.14■□□□□ 0.01
CCDC90B-201ENST00000260054 CXCR2P25025 360 aa15.14■□□□□ 0.01
CCDC90B-201ENST00000260054 SERPINB3P29508 390 aa15.14■□□□□ 0.01
CCDC90B-201ENST00000260054 GRK3P35626 688 aa15.14■□□□□ 0.01
CCDC90B-201ENST00000260054 HTR6P50406 440 aa15.14■□□□□ 0.01
CCDC90B-201ENST00000260054 NOVA1P51513 510 aaKnown RBP15.14■□□□□ 0.01
CCDC90B-201ENST00000260054 CYP4F3Q08477 520 aa15.14■□□□□ 0.01
CCDC90B-201ENST00000260054 LAPTM5Q13571 262 aa15.14■□□□□ 0.01
CCDC90B-201ENST00000260054 RBBP5Q15291 538 aaKnown RBP15.14■□□□□ 0.01
CCDC90B-201ENST00000260054 UGT3A2Q3SY77 523 aa15.14■□□□□ 0.01
CCDC90B-201ENST00000260054 PHF19Q5T6S3 580 aa15.14■□□□□ 0.01
CCDC90B-201ENST00000260054 CDCP2Q5VXM1 449 aa15.14■□□□□ 0.01
CCDC90B-201ENST00000260054 MED27Q6P2C8 311 aa15.14■□□□□ 0.01
CCDC90B-201ENST00000260054 RBM44Q6ZP01 1051 aaKnown RBP15.14■□□□□ 0.01
CCDC90B-201ENST00000260054 RNF44Q7L0R7 432 aa15.14■□□□□ 0.01
CCDC90B-201ENST00000260054 LAS2Q8IYD9 372 aa15.14■□□□□ 0.01
CCDC90B-201ENST00000260054 OR7G3Q8NG95 312 aa15.14■□□□□ 0.01
CCDC90B-201ENST00000260054 WDR20Q8TBZ3 569 aa15.14■□□□□ 0.01
CCDC90B-201ENST00000260054 MAGEB10Q96LZ2 347 aaPredicted RBP15.14■□□□□ 0.01
CCDC90B-201ENST00000260054 ZNF317Q96PQ6 595 aaPredicted RBP15.14■□□□□ 0.01
CCDC90B-201ENST00000260054 SLC29A3Q9BZD2 475 aa15.14■□□□□ 0.01
CCDC90B-201ENST00000260054 MARCOQ9UEW3 520 aaPredicted RBP15.14■□□□□ 0.01
CCDC90B-201ENST00000260054 CNOT1A5YKK6 2376 aaKnown RBP15.14■□□□□ 0.01
CCDC90B-201ENST00000260054 A0A0J9YVX5 310 aa15.13■□□□□ 0.01
CCDC90B-201ENST00000260054 OR1F1O43749 312 aa15.13■□□□□ 0.01
CCDC90B-201ENST00000260054 EDF1O60869 148 aaKnown RBP15.13■□□□□ 0.01
CCDC90B-201ENST00000260054 CRCPO75575 148 aa15.13■□□□□ 0.01
CCDC90B-201ENST00000260054 UROSP10746 265 aa15.13■□□□□ 0.01
CCDC90B-201ENST00000260054 NELFEP18615 380 aaKnown RBP15.13■□□□□ 0.01
CCDC90B-201ENST00000260054 HMOX2P30519 316 aa15.13■□□□□ 0.01
CCDC90B-201ENST00000260054 MLLT3P42568 568 aaPredicted RBP15.13■□□□□ 0.01
CCDC90B-201ENST00000260054 SCTRP47872 440 aa15.13■□□□□ 0.01
CCDC90B-201ENST00000260054 GABRA4P48169 554 aa15.13■□□□□ 0.01
CCDC90B-201ENST00000260054 RPL14P50914 215 aaKnown RBP15.13■□□□□ 0.01
CCDC90B-201ENST00000260054 NEK2P51955 445 aa15.13■□□□□ 0.01
CCDC90B-201ENST00000260054 GNGT1P63211 74 aa15.13■□□□□ 0.01
CCDC90B-201ENST00000260054 HSD11B2P80365 405 aa15.13■□□□□ 0.01
CCDC90B-201ENST00000260054 RELAQ04206 551 aa15.13■□□□□ 0.01
CCDC90B-201ENST00000260054 KCNAB1Q14722 419 aa15.13■□□□□ 0.01
CCDC90B-201ENST00000260054 HIST2H2ACQ16777 129 aaPredicted RBP15.13■□□□□ 0.01
CCDC90B-201ENST00000260054 RSPO4Q2I0M5 234 aaPredicted RBP15.13■□□□□ 0.01
CCDC90B-201ENST00000260054 DEFB110Q30KQ9 67 aa15.13■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms