RNA–Protein interactions for RNA: ENST00000258909.13

TM6SF1-201, Transcript of transmembrane 6 superfamily member 1, humanhuman

TSL 1 (best)

Gene TM6SF1, Length 1,469 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM6SF1-201ENST00000258909 EEF1AKMT1Q8WVE0 214 aa18.06■□□□□ 0.48
TM6SF1-201ENST00000258909 MVB12AQ96EY5 273 aa18.06■□□□□ 0.48
TM6SF1-201ENST00000258909 DRC3Q9H069 523 aa18.06■□□□□ 0.48
TM6SF1-201ENST00000258909 DDX47Q9H0S4 455 aaKnown RBP18.06■□□□□ 0.48
TM6SF1-201ENST00000258909 SLC17A6Q9P2U8 582 aa18.06■□□□□ 0.48
TM6SF1-201ENST00000258909 ASIC3Q9UHC3 531 aa18.06■□□□□ 0.48
TM6SF1-201ENST00000258909 TRMT6Q9UJA5 497 aaKnown RBP18.06■□□□□ 0.48
TM6SF1-201ENST00000258909 SH2B3Q9UQQ2 575 aa18.06■□□□□ 0.48
TM6SF1-201ENST00000258909 COMMD10Q9Y6G5 202 aa18.06■□□□□ 0.48
TM6SF1-201ENST00000258909 POLEQ07864 2286 aa18.06■□□□□ 0.48
TM6SF1-201ENST00000258909 GOLGA6L10A0A0M3HER8 536 aa18.05■□□□□ 0.48
TM6SF1-201ENST00000258909 HEXBP07686 556 aa18.05■□□□□ 0.48
TM6SF1-201ENST00000258909 CXCR2P25025 360 aa18.05■□□□□ 0.48
TM6SF1-201ENST00000258909 GABRB3P28472 473 aa18.05■□□□□ 0.48
TM6SF1-201ENST00000258909 EFNA3P52797 238 aa18.05■□□□□ 0.48
TM6SF1-201ENST00000258909 TBPL1P62380 186 aa18.05■□□□□ 0.48
TM6SF1-201ENST00000258909 CDC16Q13042 620 aa18.05■□□□□ 0.48
TM6SF1-201ENST00000258909 ELOAQ14241 798 aaKnown RBP18.05■□□□□ 0.48
TM6SF1-201ENST00000258909 ZNF169Q14929 603 aaPredicted RBP18.05■□□□□ 0.48
TM6SF1-201ENST00000258909 RBM20Q5T481 1227 aaKnown RBP18.05■□□□□ 0.48
TM6SF1-201ENST00000258909 GARNL3Q5VVW2 1013 aa18.05■□□□□ 0.48
TM6SF1-201ENST00000258909 NDUFAF7Q7L592 441 aa18.05■□□□□ 0.48
TM6SF1-201ENST00000258909 KBTBD2Q8IY47 623 aa18.05■□□□□ 0.48
TM6SF1-201ENST00000258909 C2CD4AQ8NCU7 369 aaPredicted RBP18.05■□□□□ 0.48
TM6SF1-201ENST00000258909 ALKBH8Q96BT7 664 aaKnown RBP18.05■□□□□ 0.48
TM6SF1-201ENST00000258909 BARD1Q99728 777 aaKnown RBP18.05■□□□□ 0.48
TM6SF1-201ENST00000258909 CCDC177Q9NQR7 707 aaPredicted RBP18.05■□□□□ 0.48
TM6SF1-201ENST00000258909 TRMT1Q9NXH9 659 aaKnown RBP18.05■□□□□ 0.48
TM6SF1-201ENST00000258909 PTGFRNQ9P2B2 879 aa18.05■□□□□ 0.48
TM6SF1-201ENST00000258909 SNX12Q9UMY4 172 aa18.05■□□□□ 0.48
TM6SF1-201ENST00000258909 PDE10AQ9Y233 779 aa18.05■□□□□ 0.48
TM6SF1-201ENST00000258909 ZGRF1Q86YA3 2104 aa18.04■□□□□ 0.48
TM6SF1-201ENST00000258909 PRPF4O43172 522 aaKnown RBP eCLIP18.04■□□□□ 0.48
TM6SF1-201ENST00000258909 PGGT1BP53609 377 aa18.04■□□□□ 0.48
TM6SF1-201ENST00000258909 MFAP5Q13361 173 aa18.04■□□□□ 0.48
TM6SF1-201ENST00000258909 PTK6Q13882 451 aa18.04■□□□□ 0.48
TM6SF1-201ENST00000258909 HP1BP3Q5SSJ5 553 aaPredicted RBP18.04■□□□□ 0.48
TM6SF1-201ENST00000258909 PAQR3Q6TCH7 311 aa18.04■□□□□ 0.48
TM6SF1-201ENST00000258909 IGDCC3Q8IVU1 814 aa18.04■□□□□ 0.48
TM6SF1-201ENST00000258909 ZC3H7AQ8IWR0 971 aaKnown RBP18.04■□□□□ 0.48
TM6SF1-201ENST00000258909 SIRT6Q8N6T7 355 aa18.04■□□□□ 0.48
TM6SF1-201ENST00000258909 OR9A4Q8NGU2 314 aa18.04■□□□□ 0.48
TM6SF1-201ENST00000258909 BRIX1Q8TDN6 353 aaKnown RBP18.04■□□□□ 0.48
TM6SF1-201ENST00000258909 GRHL3Q8TE85 626 aa18.04■□□□□ 0.48
TM6SF1-201ENST00000258909 PSMF1Q92530 271 aa18.04■□□□□ 0.48
TM6SF1-201ENST00000258909 EBNA1BP2Q99848 306 aaKnown RBP18.04■□□□□ 0.48
TM6SF1-201ENST00000258909 ATG10Q9H0Y0 220 aa18.04■□□□□ 0.48
TM6SF1-201ENST00000258909 MKKSQ9NPJ1 570 aaPredicted RBP18.04■□□□□ 0.48
TM6SF1-201ENST00000258909 AGPAT4Q9NRZ5 378 aa18.04■□□□□ 0.48
TM6SF1-201ENST00000258909 PLA2G3Q9NZ20 509 aa18.04■□□□□ 0.48
TM6SF1-201ENST00000258909 CRYBG3Q68DQ2 2970 aa18.03■□□□□ 0.48
TM6SF1-201ENST00000258909 IGHV1-45A0A0A0MS14 117 aa18.03■□□□□ 0.48
TM6SF1-201ENST00000258909 TXNDC9O14530 226 aa18.03■□□□□ 0.48
TM6SF1-201ENST00000258909 DNALI1O14645 258 aaPredicted RBP18.03■□□□□ 0.48
TM6SF1-201ENST00000258909 JRKO75564 520 aa18.03■□□□□ 0.48
TM6SF1-201ENST00000258909 F10P00742 488 aa18.03■□□□□ 0.48
TM6SF1-201ENST00000258909 PRR35P0CG20 571 aa18.03■□□□□ 0.48
TM6SF1-201ENST00000258909 CDKN2DP55273 166 aa18.03■□□□□ 0.48
TM6SF1-201ENST00000258909 RELAQ04206 551 aa18.03■□□□□ 0.48
TM6SF1-201ENST00000258909 TLR1Q15399 786 aa18.03■□□□□ 0.48
TM6SF1-201ENST00000258909 BBS9Q3SYG4 887 aa18.03■□□□□ 0.48
TM6SF1-201ENST00000258909 PRSS41Q7RTY9 318 aa18.03■□□□□ 0.48
TM6SF1-201ENST00000258909 VN1R4Q7Z5H5 301 aa18.03■□□□□ 0.48
TM6SF1-201ENST00000258909 MCOLN3Q8TDD5 553 aa18.03■□□□□ 0.48
TM6SF1-201ENST00000258909 PWWP2AQ96N64 755 aa18.03■□□□□ 0.48
TM6SF1-201ENST00000258909 TMEM184CQ9NVA4 438 aa18.03■□□□□ 0.48
TM6SF1-201ENST00000258909 C14orf105Q9NVL8 296 aa18.03■□□□□ 0.48
TM6SF1-201ENST00000258909 MKL2Q9ULH7 1088 aa18.03■□□□□ 0.48
TM6SF1-201ENST00000258909 DIDO1Q9BTC0 2240 aaKnown RBP18.03■□□□□ 0.48
TM6SF1-201ENST00000258909 FEZF1A0PJY2 475 aa18.02■□□□□ 0.48
TM6SF1-201ENST00000258909 DDAH2O95865 285 aa18.02■□□□□ 0.48
TM6SF1-201ENST00000258909 AHSGP02765 367 aa18.02■□□□□ 0.48
TM6SF1-201ENST00000258909 TSFMP43897 325 aaKnown RBP18.02■□□□□ 0.48
TM6SF1-201ENST00000258909 UGT3A1Q6NUS8 523 aa18.02■□□□□ 0.48
TM6SF1-201ENST00000258909 AGTRAPQ6RW13 159 aa18.02■□□□□ 0.48
TM6SF1-201ENST00000258909 OR1N1Q8NGS0 311 aa18.02■□□□□ 0.48
TM6SF1-201ENST00000258909 LINGO1Q96FE5 620 aa18.02■□□□□ 0.48
TM6SF1-201ENST00000258909 CCDC138Q96M89 665 aa18.02■□□□□ 0.48
TM6SF1-201ENST00000258909 LMF1Q96S06 567 aa18.02■□□□□ 0.48
TM6SF1-201ENST00000258909 TGIF2Q9GZN2 237 aa18.02■□□□□ 0.48
TM6SF1-201ENST00000258909 TAS2R13Q9NYV9 303 aa18.02■□□□□ 0.48
TM6SF1-201ENST00000258909 EIF3FO00303 357 aaPredicted RBP18.01■□□□□ 0.47
TM6SF1-201ENST00000258909 LDLRP01130 860 aa18.01■□□□□ 0.47
TM6SF1-201ENST00000258909 UQCRHP07919 91 aa18.01■□□□□ 0.47
TM6SF1-201ENST00000258909 COL8A1P27658 744 aa18.01■□□□□ 0.47
TM6SF1-201ENST00000258909 AVPR1BP47901 424 aa18.01■□□□□ 0.47
TM6SF1-201ENST00000258909 RGS4P49798 205 aa18.01■□□□□ 0.47
TM6SF1-201ENST00000258909 CSNK1G2P78368 415 aa18.01■□□□□ 0.47
TM6SF1-201ENST00000258909 ARG2P78540 354 aa18.01■□□□□ 0.47
TM6SF1-201ENST00000258909 NAE1Q13564 534 aa18.01■□□□□ 0.47
TM6SF1-201ENST00000258909 FAM53BQ14153 422 aa18.01■□□□□ 0.47
TM6SF1-201ENST00000258909 NDUFA9Q16795 377 aa18.01■□□□□ 0.47
TM6SF1-201ENST00000258909 PHKG1Q16816 387 aa18.01■□□□□ 0.47
TM6SF1-201ENST00000258909 SPANXN3Q5MJ09 141 aa18.01■□□□□ 0.47
TM6SF1-201ENST00000258909 B3GNTL1Q67FW5 361 aaPredicted RBP18.01■□□□□ 0.47
TM6SF1-201ENST00000258909 PALM2Q8IXS6 379 aa18.01■□□□□ 0.47
TM6SF1-201ENST00000258909 MYO1HQ8N1T3 1032 aa18.01■□□□□ 0.47
TM6SF1-201ENST00000258909 PARVBQ9HBI1 364 aa18.01■□□□□ 0.47
TM6SF1-201ENST00000258909 PLAC1Q9HBJ0 212 aa18.01■□□□□ 0.47
TM6SF1-201ENST00000258909 PPANQ9NQ55 473 aaKnown RBP18.01■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms