RNA–Protein interactions for RNA: ENST00000253794.6

VPS25-201, Transcript of vacuolar protein sorting 25 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS25, Length 1,101 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-201ENST00000253794 GRK3P35626 688 aa13.51□□□□□ -0.25
VPS25-201ENST00000253794 AHRP35869 848 aa13.51□□□□□ -0.25
VPS25-201ENST00000253794 GCGRP47871 477 aa13.51□□□□□ -0.25
VPS25-201ENST00000253794 SCTRP47872 440 aa13.51□□□□□ -0.25
VPS25-201ENST00000253794 PKNOX1P55347 436 aa13.51□□□□□ -0.25
VPS25-201ENST00000253794 RAB15P59190 212 aa13.51□□□□□ -0.25
VPS25-201ENST00000253794 SH3BP2P78314 561 aa13.51□□□□□ -0.25
VPS25-201ENST00000253794 IRF8Q02556 426 aa13.51□□□□□ -0.25
VPS25-201ENST00000253794 GPS2Q13227 327 aa13.51□□□□□ -0.25
VPS25-201ENST00000253794 XKR6Q5GH73 641 aa13.51□□□□□ -0.25
VPS25-201ENST00000253794 PAGE2BQ5JRK9 111 aa13.51□□□□□ -0.25
VPS25-201ENST00000253794 C10orf62Q5T681 223 aaPredicted RBP13.51□□□□□ -0.25
VPS25-201ENST00000253794 HHATQ5VTY9 493 aa13.51□□□□□ -0.25
VPS25-201ENST00000253794 NUDCD3Q8IVD9 361 aa13.51□□□□□ -0.25
VPS25-201ENST00000253794 LAS2Q8IYD9 372 aa13.51□□□□□ -0.25
VPS25-201ENST00000253794 OR52B6Q8NGF0 335 aa13.51□□□□□ -0.25
VPS25-201ENST00000253794 RAB3IL1Q8TBN0 382 aa13.51□□□□□ -0.25
VPS25-201ENST00000253794 UBE2E3Q969T4 207 aa13.51□□□□□ -0.25
VPS25-201ENST00000253794 TM4SF19Q96DZ7 209 aa13.51□□□□□ -0.25
VPS25-201ENST00000253794 FCRL4Q96PJ5 515 aa13.51□□□□□ -0.25
VPS25-201ENST00000253794 SELENOSQ9BQE4 189 aa13.51□□□□□ -0.25
VPS25-201ENST00000253794 DDA1Q9BW61 102 aa13.51□□□□□ -0.25
VPS25-201ENST00000253794 NRSN2Q9GZP1 204 aa13.51□□□□□ -0.25
VPS25-201ENST00000253794 KLHL25Q9H0H3 589 aa13.51□□□□□ -0.25
VPS25-201ENST00000253794 SEMA4BQ9NPR2 832 aaPredicted RBP13.51□□□□□ -0.25
VPS25-201ENST00000253794 FGF21Q9NSA1 209 aa13.51□□□□□ -0.25
VPS25-201ENST00000253794 OCIAD1Q9NX40 245 aa13.51□□□□□ -0.25
VPS25-201ENST00000253794 ZNF225Q9UK10 706 aa13.51□□□□□ -0.25
VPS25-201ENST00000253794 PCDHGA4Q9Y5G9 962 aa13.51□□□□□ -0.25
VPS25-201ENST00000253794 PCDHGA3Q9Y5H0 932 aa13.51□□□□□ -0.25
VPS25-201ENST00000253794 WDFY3Q8IZQ1 3526 aa13.51□□□□□ -0.25
VPS25-201ENST00000253794 SPTBN2O15020 2390 aa13.5□□□□□ -0.25
VPS25-201ENST00000253794 FITM1A5D6W6 292 aa13.5□□□□□ -0.25
VPS25-201ENST00000253794 EFCAB7A8K855 629 aa13.5□□□□□ -0.25
VPS25-201ENST00000253794 HCRTR1O43613 425 aa13.5□□□□□ -0.25
VPS25-201ENST00000253794 HYAL3O43820 417 aaPredicted RBP13.5□□□□□ -0.25
VPS25-201ENST00000253794 DXOO77932 396 aaKnown RBP13.5□□□□□ -0.25
VPS25-201ENST00000253794 SNUPNO95149 360 aaKnown RBP13.5□□□□□ -0.25
VPS25-201ENST00000253794 CLDN9O95484 217 aa13.5□□□□□ -0.25
VPS25-201ENST00000253794 ESRRBO95718 433 aa13.5□□□□□ -0.25
VPS25-201ENST00000253794 SERPINE1P05121 402 aa13.5□□□□□ -0.25
VPS25-201ENST00000253794 ADRB1P08588 477 aa13.5□□□□□ -0.25
VPS25-201ENST00000253794 CCL4P13236 92 aa13.5□□□□□ -0.25
VPS25-201ENST00000253794 NR1D1P20393 614 aa13.5□□□□□ -0.25
VPS25-201ENST00000253794 GRK2P25098 689 aa13.5□□□□□ -0.25
VPS25-201ENST00000253794 SERPINB1P30740 379 aa13.5□□□□□ -0.25
VPS25-201ENST00000253794 HPDP32754 393 aaPredicted RBP13.5□□□□□ -0.25
VPS25-201ENST00000253794 BCL6P41182 706 aa13.5□□□□□ -0.25
VPS25-201ENST00000253794 CCNG1P51959 295 aa13.5□□□□□ -0.25
VPS25-201ENST00000253794 EMP3P54852 163 aa13.5□□□□□ -0.25
VPS25-201ENST00000253794 CDH13P55290 713 aa13.5□□□□□ -0.25
VPS25-201ENST00000253794 TUBB3Q13509 450 aa13.5□□□□□ -0.25
VPS25-201ENST00000253794 SLBPQ14493 270 aaKnown RBP eCLIP13.5□□□□□ -0.25
VPS25-201ENST00000253794 KCNAB1Q14722 419 aa13.5□□□□□ -0.25
VPS25-201ENST00000253794 RTP5Q14D33 572 aa13.5□□□□□ -0.25
VPS25-201ENST00000253794 LARP7Q4G0J3 582 aaKnown RBP eCLIP13.5□□□□□ -0.25
VPS25-201ENST00000253794 TCTE1Q5JU00 501 aa13.5□□□□□ -0.25
VPS25-201ENST00000253794 TMIGD1Q6UXZ0 262 aa13.5□□□□□ -0.25
VPS25-201ENST00000253794 RPS27LQ71UM5 84 aaKnown RBP13.5□□□□□ -0.25
VPS25-201ENST00000253794 VN1R4Q7Z5H5 301 aa13.5□□□□□ -0.25
VPS25-201ENST00000253794 ADCK2Q7Z695 626 aa13.5□□□□□ -0.25
VPS25-201ENST00000253794 MCATQ8IVS2 390 aaKnown RBP13.5□□□□□ -0.25
VPS25-201ENST00000253794 HOMEZQ8IX15 550 aa13.5□□□□□ -0.25
VPS25-201ENST00000253794 KRT78Q8N1N4 520 aa13.5□□□□□ -0.25
VPS25-201ENST00000253794 TBC1D19Q8N5T2 526 aa13.5□□□□□ -0.25
VPS25-201ENST00000253794 CCNYL1Q8N7R7 359 aa13.5□□□□□ -0.25
VPS25-201ENST00000253794 ANKRD42Q8N9B4 389 aa13.5□□□□□ -0.25
VPS25-201ENST00000253794 MFSD9Q8NBP5 474 aa13.5□□□□□ -0.25
VPS25-201ENST00000253794 ZNF740Q8NDX6 193 aa13.5□□□□□ -0.25
VPS25-201ENST00000253794 TTLQ8NG68 377 aa13.5□□□□□ -0.25
VPS25-201ENST00000253794 PPP4R1Q8TF05 950 aa13.5□□□□□ -0.25
VPS25-201ENST00000253794 AGAP11Q8TF27 550 aa13.5□□□□□ -0.25
VPS25-201ENST00000253794 TEFMQ96QE5 360 aaKnown RBP13.5□□□□□ -0.25
VPS25-201ENST00000253794 ZPBPQ9BS86 351 aa13.5□□□□□ -0.25
VPS25-201ENST00000253794 DRC3Q9H069 523 aa13.5□□□□□ -0.25
VPS25-201ENST00000253794 RHBGQ9H310 441 aa13.5□□□□□ -0.25
VPS25-201ENST00000253794 ACTR8Q9H981 624 aa13.5□□□□□ -0.25
VPS25-201ENST00000253794 SYNPO2LQ9H987 977 aa13.5□□□□□ -0.25
VPS25-201ENST00000253794 POLR1BQ9H9Y6 1135 aa13.5□□□□□ -0.25
VPS25-201ENST00000253794 FANCEQ9HB96 536 aa13.5□□□□□ -0.25
VPS25-201ENST00000253794 TRPS1Q9UHF7 1281 aa13.5□□□□□ -0.25
VPS25-201ENST00000253794 ZFP69BQ9UJL9 534 aa13.5□□□□□ -0.25
VPS25-201ENST00000253794 ZNF490Q9ULM2 529 aaPredicted RBP13.5□□□□□ -0.25
VPS25-201ENST00000253794 PPT2Q9UMR5 302 aa13.5□□□□□ -0.25
VPS25-201ENST00000253794 NEUROG3Q9Y4Z2 214 aa13.5□□□□□ -0.25
VPS25-201ENST00000253794 AP1M2Q9Y6Q5 423 aa13.5□□□□□ -0.25
VPS25-201ENST00000253794 A0A1B0GTL3 188 aa13.49□□□□□ -0.25
VPS25-201ENST00000253794 FAM149AA5PLN7 773 aa13.49□□□□□ -0.25
VPS25-201ENST00000253794 TMEM114B3SHH9 223 aa13.49□□□□□ -0.25
VPS25-201ENST00000253794 PPP6CO00743 305 aa13.49□□□□□ -0.25
VPS25-201ENST00000253794 UBFD1O14562 309 aaKnown RBP13.49□□□□□ -0.25
VPS25-201ENST00000253794 LCMT2O60294 686 aaKnown RBP13.49□□□□□ -0.25
VPS25-201ENST00000253794 ENO1P06733 434 aaKnown RBP13.49□□□□□ -0.25
VPS25-201ENST00000253794 ERVPABLB-1P60509 514 aa13.49□□□□□ -0.25
VPS25-201ENST00000253794 RCN2Q14257 317 aa13.49□□□□□ -0.25
VPS25-201ENST00000253794 GPR19Q15760 415 aa13.49□□□□□ -0.25
VPS25-201ENST00000253794 HIST2H2ACQ16777 129 aaPredicted RBP13.49□□□□□ -0.25
VPS25-201ENST00000253794 CFAP157Q5JU67 520 aa13.49□□□□□ -0.25
VPS25-201ENST00000253794 MANEAQ5SRI9 462 aa13.49□□□□□ -0.25
VPS25-201ENST00000253794 HIST2H2AA3Q6FI13 130 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms