RNA–Protein interactions for RNA: ENST00000247225.6

SGPP1-201, Transcript of sphingosine-1-phosphate phosphatase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SGPP1, Length 3,312 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGPP1-201ENST00000247225 MS4A12Q9NXJ0 267 aa16.34■□□□□ 0.21
SGPP1-201ENST00000247225 SPATA7Q9P0W8 599 aa16.34■□□□□ 0.21
SGPP1-201ENST00000247225 RAB23Q9ULC3 237 aa16.34■□□□□ 0.21
SGPP1-201ENST00000247225 TMEM88BA6NKF7 163 aa16.33■□□□□ 0.2
SGPP1-201ENST00000247225 SLC16A6O15403 523 aa16.33■□□□□ 0.2
SGPP1-201ENST00000247225 ATG9BQ674R7 924 aa16.33■□□□□ 0.2
SGPP1-201ENST00000247225 TRIM48Q8IWZ4 208 aa16.33■□□□□ 0.2
SGPP1-201ENST00000247225 GLB1L3Q8NCI6 653 aaPredicted RBP16.33■□□□□ 0.2
SGPP1-201ENST00000247225 WDR36Q8NI36 951 aaKnown RBP16.33■□□□□ 0.2
SGPP1-201ENST00000247225 TM9SF3Q9HD45 589 aa16.33■□□□□ 0.2
SGPP1-201ENST00000247225 ABCB9Q9NP78 766 aa16.33■□□□□ 0.2
SGPP1-201ENST00000247225 MALT1Q9UDY8 824 aa16.33■□□□□ 0.2
SGPP1-201ENST00000247225 LRFN2Q9ULH4 789 aa16.33■□□□□ 0.2
SGPP1-201ENST00000247225 USP34Q70CQ2 3546 aa16.33■□□□□ 0.2
SGPP1-201ENST00000247225 MGAT4DA6NG13 374 aa16.33■□□□□ 0.2
SGPP1-201ENST00000247225 ZNF623O75123 536 aa16.33■□□□□ 0.2
SGPP1-201ENST00000247225 RETP07949 1114 aa16.33■□□□□ 0.2
SGPP1-201ENST00000247225 WEE1P30291 646 aa16.33■□□□□ 0.2
SGPP1-201ENST00000247225 EIF2DP41214 584 aaKnown RBP16.33■□□□□ 0.2
SGPP1-201ENST00000247225 DSC3Q14574 896 aa16.33■□□□□ 0.2
SGPP1-201ENST00000247225 ARMC4Q5T2S8 1044 aa16.33■□□□□ 0.2
SGPP1-201ENST00000247225 USP50Q70EL3 339 aaPredicted RBP16.33■□□□□ 0.2
SGPP1-201ENST00000247225 SNX20Q7Z614 316 aa16.33■□□□□ 0.2
SGPP1-201ENST00000247225 SCAMP4Q969E2 229 aa16.33■□□□□ 0.2
SGPP1-201ENST00000247225 TADA1Q96BN2 335 aa16.33■□□□□ 0.2
SGPP1-201ENST00000247225 NEDD4LQ96PU5 975 aa16.33■□□□□ 0.2
SGPP1-201ENST00000247225 SLC22A12Q96S37 553 aa16.33■□□□□ 0.2
SGPP1-201ENST00000247225 PCDH7O60245 1069 aa16.32■□□□□ 0.2
SGPP1-201ENST00000247225 ETFAP13804 333 aa16.32■□□□□ 0.2
SGPP1-201ENST00000247225 GJA1P17302 382 aa16.32■□□□□ 0.2
SGPP1-201ENST00000247225 ATF6P18850 670 aa16.32■□□□□ 0.2
SGPP1-201ENST00000247225 MEF2AQ02078 507 aaPredicted RBP16.32■□□□□ 0.2
SGPP1-201ENST00000247225 NAE1Q13564 534 aa16.32■□□□□ 0.2
SGPP1-201ENST00000247225 CBX2Q14781 532 aaPredicted RBP16.32■□□□□ 0.2
SGPP1-201ENST00000247225 NIPSNAP1Q9BPW8 284 aa16.32■□□□□ 0.2
SGPP1-201ENST00000247225 ADPRHL2Q9NX46 363 aa16.32■□□□□ 0.2
SGPP1-201ENST00000247225 UGT2A1Q9Y4X1 527 aa16.32■□□□□ 0.2
SGPP1-201ENST00000247225 RFXAPO00287 272 aa16.32■□□□□ 0.2
SGPP1-201ENST00000247225 YY2O15391 372 aa16.32■□□□□ 0.2
SGPP1-201ENST00000247225 STC2O76061 302 aa16.32■□□□□ 0.2
SGPP1-201ENST00000247225 KCNK5O95279 499 aa16.32■□□□□ 0.2
SGPP1-201ENST00000247225 TTLL9Q3SXZ7 439 aa16.32■□□□□ 0.2
SGPP1-201ENST00000247225 SYT6Q5T7P8 510 aaPredicted RBP16.32■□□□□ 0.2
SGPP1-201ENST00000247225 NEK5Q6P3R8 708 aa16.32■□□□□ 0.2
SGPP1-201ENST00000247225 MEX3DQ86XN8 651 aaKnown RBP16.32■□□□□ 0.2
SGPP1-201ENST00000247225 GPR65Q8IYL9 337 aa16.32■□□□□ 0.2
SGPP1-201ENST00000247225 CCDC115Q96NT0 180 aa16.32■□□□□ 0.2
SGPP1-201ENST00000247225 GABRQQ9UN88 632 aa16.32■□□□□ 0.2
SGPP1-201ENST00000247225 OARD1Q9Y530 152 aa16.32■□□□□ 0.2
SGPP1-201ENST00000247225 AGAP5A6NIR3 686 aa16.32■□□□□ 0.2
SGPP1-201ENST00000247225 M0QX08 132 aa16.32■□□□□ 0.2
SGPP1-201ENST00000247225 KIAA0513O60268 411 aa16.32■□□□□ 0.2
SGPP1-201ENST00000247225 OAZ2O95190 189 aa16.32■□□□□ 0.2
SGPP1-201ENST00000247225 EBLN1P0CF75 366 aa16.32■□□□□ 0.2
SGPP1-201ENST00000247225 SSTR4P31391 388 aa16.32■□□□□ 0.2
SGPP1-201ENST00000247225 CLDN8P56748 225 aa16.32■□□□□ 0.2
SGPP1-201ENST00000247225 OR2B6P58173 313 aa16.32■□□□□ 0.2
SGPP1-201ENST00000247225 CYP4F8P98187 520 aa16.32■□□□□ 0.2
SGPP1-201ENST00000247225 LEXMQ3ZCV2 418 aa16.32■□□□□ 0.2
SGPP1-201ENST00000247225 ATP13A5Q4VNC0 1218 aa16.32■□□□□ 0.2
SGPP1-201ENST00000247225 GDPD3Q7L5L3 318 aa16.32■□□□□ 0.2
SGPP1-201ENST00000247225 C1orf52Q8N6N3 182 aaKnown RBP16.32■□□□□ 0.2
SGPP1-201ENST00000247225 GPR26Q8NDV2 337 aa16.32■□□□□ 0.2
SGPP1-201ENST00000247225 OR10G2Q8NGC3 310 aa16.32■□□□□ 0.2
SGPP1-201ENST00000247225 AUTS2Q8WXX7 1259 aa16.32■□□□□ 0.2
SGPP1-201ENST00000247225 GGHQ92820 318 aa16.32■□□□□ 0.2
SGPP1-201ENST00000247225 PKP4Q99569 1192 aa16.32■□□□□ 0.2
SGPP1-201ENST00000247225 ZNF556Q9HAH1 456 aa16.32■□□□□ 0.2
SGPP1-201ENST00000247225 RPS6KA6Q9UK32 745 aa16.32■□□□□ 0.2
SGPP1-201ENST00000247225 NOX1Q9Y5S8 564 aa16.32■□□□□ 0.2
SGPP1-201ENST00000247225 NUMA1Q14980 2115 aa16.31■□□□□ 0.2
SGPP1-201ENST00000247225 A0A1B0GVM2 712 aa16.31■□□□□ 0.2
SGPP1-201ENST00000247225 FAM220BPB1ANY3 271 aa16.31■□□□□ 0.2
SGPP1-201ENST00000247225 H3BN98 237 aa16.31■□□□□ 0.2
SGPP1-201ENST00000247225 M0R082 166 aa16.31■□□□□ 0.2
SGPP1-201ENST00000247225 DUSP11O75319 330 aaKnown RBP16.31■□□□□ 0.2
SGPP1-201ENST00000247225 CCR7P32248 378 aa16.31■□□□□ 0.2
SGPP1-201ENST00000247225 SOX3P41225 446 aa16.31■□□□□ 0.2
SGPP1-201ENST00000247225 LRIT3Q3SXY7 679 aa16.31■□□□□ 0.2
SGPP1-201ENST00000247225 BCL7AQ4VC05 210 aa16.31■□□□□ 0.2
SGPP1-201ENST00000247225 ZMAT1Q5H9K5 638 aa16.31■□□□□ 0.2
SGPP1-201ENST00000247225 DEPDC1Q5TB30 811 aa16.31■□□□□ 0.2
SGPP1-201ENST00000247225 KDM4DQ6B0I6 523 aa16.31■□□□□ 0.2
SGPP1-201ENST00000247225 ZNF852Q6ZMS4 543 aa16.31■□□□□ 0.2
SGPP1-201ENST00000247225 SLC34A3Q8N130 599 aa16.31■□□□□ 0.2
SGPP1-201ENST00000247225 CYP4Z2PQ8N1L4 340 aa16.31■□□□□ 0.2
SGPP1-201ENST00000247225 ARL14EPQ8N8R7 260 aaPredicted RBP16.31■□□□□ 0.2
SGPP1-201ENST00000247225 PEX13Q92968 403 aa16.31■□□□□ 0.2
SGPP1-201ENST00000247225 VMP1Q96GC9 406 aa16.31■□□□□ 0.2
SGPP1-201ENST00000247225 VPS35Q96QK1 796 aa16.31■□□□□ 0.2
SGPP1-201ENST00000247225 MMP28Q9H239 520 aa16.31■□□□□ 0.2
SGPP1-201ENST00000247225 UNC80Q8N2C7 3258 aa16.31■□□□□ 0.2
SGPP1-201ENST00000247225 TRIM64BA6NI03 449 aa16.31■□□□□ 0.2
SGPP1-201ENST00000247225 IGFBP1P08833 259 aaPredicted RBP16.31■□□□□ 0.2
SGPP1-201ENST00000247225 CR2P20023 1033 aa16.31■□□□□ 0.2
SGPP1-201ENST00000247225 HMGCLP35914 325 aa16.31■□□□□ 0.2
SGPP1-201ENST00000247225 MORN1Q5T089 497 aa16.31■□□□□ 0.2
SGPP1-201ENST00000247225 TXNDC8Q6A555 127 aa16.31■□□□□ 0.2
SGPP1-201ENST00000247225 CHPFQ8IZ52 775 aa16.31■□□□□ 0.2
SGPP1-201ENST00000247225 LGI4Q8N135 537 aa16.31■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms