RNA–Protein interactions for RNA: ENST00000237186.10

UBE3D-201, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 1 (best)

Gene UBE3D, Length 1,879 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-201ENST00000237186 RB1P06400 928 aa15.61■□□□□ 0.09
UBE3D-201ENST00000237186 LAMP1P11279 417 aa15.61■□□□□ 0.09
UBE3D-201ENST00000237186 DCKP27707 260 aa15.61■□□□□ 0.09
UBE3D-201ENST00000237186 KDELR2P33947 212 aa15.61■□□□□ 0.09
UBE3D-201ENST00000237186 GRSF1Q12849 480 aaKnown RBP eCLIP15.61■□□□□ 0.09
UBE3D-201ENST00000237186 PMS2P3Q13401 168 aa15.61■□□□□ 0.09
UBE3D-201ENST00000237186 ZNF697Q5TEC3 545 aa15.61■□□□□ 0.09
UBE3D-201ENST00000237186 ANXA8L1Q5VT79 327 aa15.61■□□□□ 0.09
UBE3D-201ENST00000237186 CAPN13Q6MZZ7 669 aaPredicted RBP15.61■□□□□ 0.09
UBE3D-201ENST00000237186 MED27Q6P2C8 311 aa15.61■□□□□ 0.09
UBE3D-201ENST00000237186 SHQ1Q6PI26 577 aaKnown RBP15.61■□□□□ 0.09
UBE3D-201ENST00000237186 SPESP1Q6UW49 350 aa15.61■□□□□ 0.09
UBE3D-201ENST00000237186 ZNF621Q6ZSS3 439 aa15.61■□□□□ 0.09
UBE3D-201ENST00000237186 KCTD8Q6ZWB6 473 aa15.61■□□□□ 0.09
UBE3D-201ENST00000237186 PTOV1Q86YD1 416 aa15.61■□□□□ 0.09
UBE3D-201ENST00000237186 CLVS1Q8IUQ0 354 aaPredicted RBP15.61■□□□□ 0.09
UBE3D-201ENST00000237186 C1orf52Q8N6N3 182 aaKnown RBP15.61■□□□□ 0.09
UBE3D-201ENST00000237186 ZNF555Q8NEP9 628 aa15.61■□□□□ 0.09
UBE3D-201ENST00000237186 CXorf40BQ96DE9 158 aa15.61■□□□□ 0.09
UBE3D-201ENST00000237186 WRAP53Q9BUR4 548 aaKnown RBP15.61■□□□□ 0.09
UBE3D-201ENST00000237186 DUSP26Q9BV47 211 aa15.61■□□□□ 0.09
UBE3D-201ENST00000237186 GABARAPL1Q9H0R8 117 aa15.61■□□□□ 0.09
UBE3D-201ENST00000237186 ING2Q9H160 280 aa15.61■□□□□ 0.09
UBE3D-201ENST00000237186 EHD1Q9H4M9 534 aa15.61■□□□□ 0.09
UBE3D-201ENST00000237186 TMEFF2Q9UIK5 374 aaPredicted RBP15.61■□□□□ 0.09
UBE3D-201ENST00000237186 RPS6KA6Q9UK32 745 aa15.61■□□□□ 0.09
UBE3D-201ENST00000237186 CDH7Q9ULB5 785 aa15.61■□□□□ 0.09
UBE3D-201ENST00000237186 LAMA2P24043 3122 aaKnown RBP15.61■□□□□ 0.09
UBE3D-201ENST00000237186 YY2O15391 372 aa15.61■□□□□ 0.09
UBE3D-201ENST00000237186 ANXA4P09525 319 aaPredicted RBP15.61■□□□□ 0.09
UBE3D-201ENST00000237186 NPPBP16860 134 aa15.61■□□□□ 0.09
UBE3D-201ENST00000237186 CRHBPP24387 322 aa15.61■□□□□ 0.09
UBE3D-201ENST00000237186 ELK4P28324 431 aa15.61■□□□□ 0.09
UBE3D-201ENST00000237186 KCNAB2Q13303 367 aa15.61■□□□□ 0.09
UBE3D-201ENST00000237186 RAB39AQ14964 217 aa15.61■□□□□ 0.09
UBE3D-201ENST00000237186 EIF4HQ15056 248 aaKnown RBP15.61■□□□□ 0.09
UBE3D-201ENST00000237186 GAB4Q2WGN9 574 aa15.61■□□□□ 0.09
UBE3D-201ENST00000237186 ZCCHC8Q6NZY4 707 aaKnown RBP15.61■□□□□ 0.09
UBE3D-201ENST00000237186 DCP2Q8IU60 420 aaKnown RBP15.61■□□□□ 0.09
UBE3D-201ENST00000237186 ZDHHC21Q8IVQ6 265 aa15.61■□□□□ 0.09
UBE3D-201ENST00000237186 LAS2Q8IYD9 372 aa15.61■□□□□ 0.09
UBE3D-201ENST00000237186 LRRC56Q8IYG6 542 aaPredicted RBP15.61■□□□□ 0.09
UBE3D-201ENST00000237186 CFAP206Q8IYR0 622 aa15.61■□□□□ 0.09
UBE3D-201ENST00000237186 HS3ST5Q8IZT8 346 aa15.61■□□□□ 0.09
UBE3D-201ENST00000237186 VPS37AQ8NEZ2 397 aa15.61■□□□□ 0.09
UBE3D-201ENST00000237186 PUM2Q8TB72 1066 aaKnown RBP eCLIP15.61■□□□□ 0.09
UBE3D-201ENST00000237186 OR8D1Q8WZ84 308 aa15.61■□□□□ 0.09
UBE3D-201ENST00000237186 NEIL2Q969S2 332 aa15.61■□□□□ 0.09
UBE3D-201ENST00000237186 NXPE3Q969Y0 559 aa15.61■□□□□ 0.09
UBE3D-201ENST00000237186 ARRDC3Q96B67 414 aa15.61■□□□□ 0.09
UBE3D-201ENST00000237186 ALPK3Q96L96 1907 aa15.61■□□□□ 0.09
UBE3D-201ENST00000237186 EFCAB11Q9BUY7 163 aa15.61■□□□□ 0.09
UBE3D-201ENST00000237186 POLR1BQ9H9Y6 1135 aa15.61■□□□□ 0.09
UBE3D-201ENST00000237186 TRIM39Q9HCM9 518 aa15.61■□□□□ 0.09
UBE3D-201ENST00000237186 ITM2CQ9NQX7 267 aa15.61■□□□□ 0.09
UBE3D-201ENST00000237186 GPR34Q9UPC5 381 aa15.61■□□□□ 0.09
UBE3D-201ENST00000237186 PCDHGA8Q9Y5G5 932 aa15.61■□□□□ 0.09
UBE3D-201ENST00000237186 C1orf226A1L170 272 aa15.6■□□□□ 0.09
UBE3D-201ENST00000237186 NOBOXO60393 691 aa15.6■□□□□ 0.09
UBE3D-201ENST00000237186 DPM1O60762 260 aa15.6■□□□□ 0.09
UBE3D-201ENST00000237186 E2F6O75461 281 aa15.6■□□□□ 0.09
UBE3D-201ENST00000237186 IDSP22304 550 aa15.6■□□□□ 0.09
UBE3D-201ENST00000237186 PPIBP23284 216 aaKnown RBP15.6■□□□□ 0.09
UBE3D-201ENST00000237186 TIA1P31483 386 aaKnown RBP eCLIP15.6■□□□□ 0.09
UBE3D-201ENST00000237186 RYKP34925 604 aa15.6■□□□□ 0.09
UBE3D-201ENST00000237186 CTBSQ01459 385 aa15.6■□□□□ 0.09
UBE3D-201ENST00000237186 MESP2Q0VG99 397 aa15.6■□□□□ 0.09
UBE3D-201ENST00000237186 IL18R1Q13478 541 aa15.6■□□□□ 0.09
UBE3D-201ENST00000237186 DDX39BQ13838 428 aaKnown RBP15.6■□□□□ 0.09
UBE3D-201ENST00000237186 SPIDRQ14159 915 aa15.6■□□□□ 0.09
UBE3D-201ENST00000237186 ELAVL3Q14576 367 aaKnown RBP15.6■□□□□ 0.09
UBE3D-201ENST00000237186 TMEM52BQ4KMG9 183 aa15.6■□□□□ 0.09
UBE3D-201ENST00000237186 CPTPQ5TA50 214 aa15.6■□□□□ 0.09
UBE3D-201ENST00000237186 ARL10Q8N8L6 244 aa15.6■□□□□ 0.09
UBE3D-201ENST00000237186 OR9A1PQ8NGU1 263 aa15.6■□□□□ 0.09
UBE3D-201ENST00000237186 NUS1Q96E22 293 aa15.6■□□□□ 0.09
UBE3D-201ENST00000237186 FAM129BQ96TA1 746 aa15.6■□□□□ 0.09
UBE3D-201ENST00000237186 DPEP2Q9H4A9 486 aa15.6■□□□□ 0.09
UBE3D-201ENST00000237186 TPT1P8Q9HAU6 139 aa15.6■□□□□ 0.09
UBE3D-201ENST00000237186 TM9SF3Q9HD45 589 aa15.6■□□□□ 0.09
UBE3D-201ENST00000237186 ATP6V1HQ9UI12 483 aa15.6■□□□□ 0.09
UBE3D-201ENST00000237186 LOC100130705A0A1B0GUX0 176 aa15.59■□□□□ 0.09
UBE3D-201ENST00000237186 NFATC1O95644 943 aa15.59■□□□□ 0.09
UBE3D-201ENST00000237186 C1QCP02747 245 aa15.59■□□□□ 0.09
UBE3D-201ENST00000237186 ITGAMP11215 1152 aa15.59■□□□□ 0.09
UBE3D-201ENST00000237186 CDK4P11802 303 aa15.59■□□□□ 0.09
UBE3D-201ENST00000237186 PIGAP37287 484 aa15.59■□□□□ 0.09
UBE3D-201ENST00000237186 RPS6KA3P51812 740 aa15.59■□□□□ 0.09
UBE3D-201ENST00000237186 METAP1P53582 386 aa15.59■□□□□ 0.09
UBE3D-201ENST00000237186 RAD23AP54725 363 aa15.59■□□□□ 0.09
UBE3D-201ENST00000237186 NUP107P57740 925 aa15.59■□□□□ 0.09
UBE3D-201ENST00000237186 ISL1P61371 349 aa15.59■□□□□ 0.09
UBE3D-201ENST00000237186 TBPL1P62380 186 aa15.59■□□□□ 0.09
UBE3D-201ENST00000237186 C6orf141Q5SZD1 244 aa15.59■□□□□ 0.09
UBE3D-201ENST00000237186 BROXQ5VW32 411 aa15.59■□□□□ 0.09
UBE3D-201ENST00000237186 OR2T5Q6IEZ7 315 aa15.59■□□□□ 0.09
UBE3D-201ENST00000237186 ADNP2Q6IQ32 1131 aa15.59■□□□□ 0.09
UBE3D-201ENST00000237186 DHRS4L2Q6PKH6 230 aa15.59■□□□□ 0.09
UBE3D-201ENST00000237186 CBLL1Q75N03 491 aa15.59■□□□□ 0.09
UBE3D-201ENST00000237186 EIF3MQ7L2H7 374 aaKnown RBP15.59■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms