RNA–Protein interactions for RNA: ENST00000229328.9

PRKAB1-201, Transcript of protein kinase AMP-activated non-catalytic subunit beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRKAB1, Length 2,610 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKAB1-201ENST00000229328 C9orf16Q9BUW7 83 aa13.9□□□□□ -0.18
PRKAB1-201ENST00000229328 ACAT2Q9BWD1 397 aa13.9□□□□□ -0.18
PRKAB1-201ENST00000229328 CCDC177Q9NQR7 707 aaPredicted RBP13.9□□□□□ -0.18
PRKAB1-201ENST00000229328 ETAA1Q9NY74 926 aa13.9□□□□□ -0.18
PRKAB1-201ENST00000229328 CKAP5Q14008 2032 aa13.9□□□□□ -0.18
PRKAB1-201ENST00000229328 NUP214P35658 2090 aaPredicted RBP13.9□□□□□ -0.18
PRKAB1-201ENST00000229328 UPK1AO00322 258 aa13.9□□□□□ -0.18
PRKAB1-201ENST00000229328 FPGTO14772 594 aa13.9□□□□□ -0.18
PRKAB1-201ENST00000229328 GMNNO75496 209 aa13.9□□□□□ -0.18
PRKAB1-201ENST00000229328 PGM3O95394 542 aa13.9□□□□□ -0.18
PRKAB1-201ENST00000229328 ADH1BP00325 375 aa13.9□□□□□ -0.18
PRKAB1-201ENST00000229328 TGFB1P01137 390 aa13.9□□□□□ -0.18
PRKAB1-201ENST00000229328 C5AR1P21730 350 aa13.9□□□□□ -0.18
PRKAB1-201ENST00000229328 SRSF11Q05519 484 aaKnown RBP13.9□□□□□ -0.18
PRKAB1-201ENST00000229328 ADAM15Q13444 863 aa13.9□□□□□ -0.18
PRKAB1-201ENST00000229328 RAB30Q15771 203 aa13.9□□□□□ -0.18
PRKAB1-201ENST00000229328 DUOXA1Q1HG43 343 aa13.9□□□□□ -0.18
PRKAB1-201ENST00000229328 NXPE4Q6UWF7 544 aa13.9□□□□□ -0.18
PRKAB1-201ENST00000229328 PACRGLQ8N7B6 248 aa13.9□□□□□ -0.18
PRKAB1-201ENST00000229328 MFSD2AQ8NA29 543 aa13.9□□□□□ -0.18
PRKAB1-201ENST00000229328 NETO1Q8TDF5 533 aa13.9□□□□□ -0.18
PRKAB1-201ENST00000229328 TFAP2CQ92754 450 aa13.9□□□□□ -0.18
PRKAB1-201ENST00000229328 NELL1Q92832 810 aa13.9□□□□□ -0.18
PRKAB1-201ENST00000229328 PANX1Q96RD7 426 aa13.9□□□□□ -0.18
PRKAB1-201ENST00000229328 TEX101Q9BY14 249 aa13.9□□□□□ -0.18
PRKAB1-201ENST00000229328 OSBPL6Q9BZF3 934 aa13.9□□□□□ -0.18
PRKAB1-201ENST00000229328 YIPF3Q9GZM5 350 aa13.9□□□□□ -0.18
PRKAB1-201ENST00000229328 GABRR3A8MPY1 467 aa13.89□□□□□ -0.19
PRKAB1-201ENST00000229328 FAM220BPB1ANY3 271 aa13.89□□□□□ -0.19
PRKAB1-201ENST00000229328 PRMT3O60678 531 aa13.89□□□□□ -0.19
PRKAB1-201ENST00000229328 MYO1DO94832 1006 aa13.89□□□□□ -0.19
PRKAB1-201ENST00000229328 RASAL1O95294 804 aa13.89□□□□□ -0.19
PRKAB1-201ENST00000229328 CPSF4O95639 269 aaKnown RBP13.89□□□□□ -0.19
PRKAB1-201ENST00000229328 GNAO1P09471 354 aa13.89□□□□□ -0.19
PRKAB1-201ENST00000229328 RAP2AP10114 183 aa13.89□□□□□ -0.19
PRKAB1-201ENST00000229328 TMTC4Q5T4D3 741 aa13.89□□□□□ -0.19
PRKAB1-201ENST00000229328 IER5LQ5T953 404 aa13.89□□□□□ -0.19
PRKAB1-201ENST00000229328 CES5AQ6NT32 575 aa13.89□□□□□ -0.19
PRKAB1-201ENST00000229328 TMEM214Q6NUQ4 689 aaKnown RBP13.89□□□□□ -0.19
PRKAB1-201ENST00000229328 ARMCX6Q7L4S7 300 aa13.89□□□□□ -0.19
PRKAB1-201ENST00000229328 LAS2Q8IYD9 372 aa13.89□□□□□ -0.19
PRKAB1-201ENST00000229328 OR8J2Q8NGG1 315 aa13.89□□□□□ -0.19
PRKAB1-201ENST00000229328 FAM162AQ96A26 154 aa13.89□□□□□ -0.19
PRKAB1-201ENST00000229328 SH3KBP1Q96B97 665 aa13.89□□□□□ -0.19
PRKAB1-201ENST00000229328 OR51B5Q9H339 312 aa13.89□□□□□ -0.19
PRKAB1-201ENST00000229328 EXO1Q9UQ84 846 aaKnown RBP13.89□□□□□ -0.19
PRKAB1-201ENST00000229328 SCAMP2O15127 329 aaKnown RBP13.89□□□□□ -0.19
PRKAB1-201ENST00000229328 CLOCKO15516 846 aa13.89□□□□□ -0.19
PRKAB1-201ENST00000229328 LATO43561 262 aa13.89□□□□□ -0.19
PRKAB1-201ENST00000229328 CREG1O75629 220 aa13.89□□□□□ -0.19
PRKAB1-201ENST00000229328 PRKD3O94806 890 aa13.89□□□□□ -0.19
PRKAB1-201ENST00000229328 NUMA1Q14980 2115 aa13.89□□□□□ -0.19
PRKAB1-201ENST00000229328 PON2Q15165 354 aa13.89□□□□□ -0.19
PRKAB1-201ENST00000229328 DPY19L1Q2PZI1 675 aa13.89□□□□□ -0.19
PRKAB1-201ENST00000229328 FAM98BQ52LJ0 330 aaKnown RBP13.89□□□□□ -0.19
PRKAB1-201ENST00000229328 METRNLQ641Q3 311 aa13.89□□□□□ -0.19
PRKAB1-201ENST00000229328 DUS1LQ6P1R4 473 aaKnown RBP13.89□□□□□ -0.19
PRKAB1-201ENST00000229328 MSANTD1Q6ZTZ1 278 aa13.89□□□□□ -0.19
PRKAB1-201ENST00000229328 NUDT18Q6ZVK8 323 aa13.89□□□□□ -0.19
PRKAB1-201ENST00000229328 OXR1Q8N573 874 aa13.89□□□□□ -0.19
PRKAB1-201ENST00000229328 TP53I13Q8NBR0 393 aaPredicted RBP13.89□□□□□ -0.19
PRKAB1-201ENST00000229328 TNIP2Q8NFZ5 429 aa13.89□□□□□ -0.19
PRKAB1-201ENST00000229328 OR10Q1Q8NGQ4 319 aa13.89□□□□□ -0.19
PRKAB1-201ENST00000229328 NCLNQ969V3 563 aa13.89□□□□□ -0.19
PRKAB1-201ENST00000229328 RAD51AP1Q96B01 352 aa13.89□□□□□ -0.19
PRKAB1-201ENST00000229328 PRPF18Q99633 342 aaKnown RBP13.89□□□□□ -0.19
PRKAB1-201ENST00000229328 EFCAB11Q9BUY7 163 aa13.89□□□□□ -0.19
PRKAB1-201ENST00000229328 DMRT3Q9NQL9 472 aa13.89□□□□□ -0.19
PRKAB1-201ENST00000229328 GNG14A0A1W2PPG7 69 aa13.88□□□□□ -0.19
PRKAB1-201ENST00000229328 PCDH7O60245 1069 aa13.88□□□□□ -0.19
PRKAB1-201ENST00000229328 SCELO95171 688 aa13.88□□□□□ -0.19
PRKAB1-201ENST00000229328 TNFAIP8O95379 198 aa13.88□□□□□ -0.19
PRKAB1-201ENST00000229328 ZNF23P17027 643 aa13.88□□□□□ -0.19
PRKAB1-201ENST00000229328 TIA1P31483 386 aaKnown RBP eCLIP13.88□□□□□ -0.19
PRKAB1-201ENST00000229328 C21orf58P58505 322 aa13.88□□□□□ -0.19
PRKAB1-201ENST00000229328 CHRNB3Q05901 458 aa13.88□□□□□ -0.19
PRKAB1-201ENST00000229328 RPA4Q13156 261 aa13.88□□□□□ -0.19
PRKAB1-201ENST00000229328 SPIN4Q56A73 249 aa13.88□□□□□ -0.19
PRKAB1-201ENST00000229328 PRAMEF14Q5SWL7 426 aa13.88□□□□□ -0.19
PRKAB1-201ENST00000229328 PRAMEF13Q5VWM6 474 aa13.88□□□□□ -0.19
PRKAB1-201ENST00000229328 ZNF621Q6ZSS3 439 aa13.88□□□□□ -0.19
PRKAB1-201ENST00000229328 APLFQ8IW19 511 aaPredicted RBP13.88□□□□□ -0.19
PRKAB1-201ENST00000229328 WDR48Q8TAF3 677 aa13.88□□□□□ -0.19
PRKAB1-201ENST00000229328 GANCQ8TET4 914 aa13.88□□□□□ -0.19
PRKAB1-201ENST00000229328 METTL2AQ96IZ6 378 aaKnown RBP13.88□□□□□ -0.19
PRKAB1-201ENST00000229328 ANKRD60Q9BZ19 345 aa13.88□□□□□ -0.19
PRKAB1-201ENST00000229328 WDR26Q9H7D7 661 aa13.88□□□□□ -0.19
PRKAB1-201ENST00000229328 ZNF696Q9H7X3 374 aa13.88□□□□□ -0.19
PRKAB1-201ENST00000229328 FBXL12Q9NXK8 326 aa13.88□□□□□ -0.19
PRKAB1-201ENST00000229328 MAGED1Q9Y5V3 778 aaPredicted RBP13.88□□□□□ -0.19
PRKAB1-201ENST00000229328 CLIC1O00299 241 aa13.88□□□□□ -0.19
PRKAB1-201ENST00000229328 ENGP17813 658 aa13.88□□□□□ -0.19
PRKAB1-201ENST00000229328 KELP23276 732 aa13.88□□□□□ -0.19
PRKAB1-201ENST00000229328 TRIM23P36406 574 aa13.88□□□□□ -0.19
PRKAB1-201ENST00000229328 TRPC1P48995 793 aa13.88□□□□□ -0.19
PRKAB1-201ENST00000229328 LIN52Q52LA3 116 aa13.88□□□□□ -0.19
PRKAB1-201ENST00000229328 TMEM196Q5HYL7 178 aa13.88□□□□□ -0.19
PRKAB1-201ENST00000229328 ZNF776Q68DI1 518 aaPredicted RBP13.88□□□□□ -0.19
PRKAB1-201ENST00000229328 CHST15Q7LFX5 561 aaPredicted RBP13.88□□□□□ -0.19
PRKAB1-201ENST00000229328 COMMD6Q7Z4G1 85 aa13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms