RNA–Protein interactions for RNA: ENST00000227503.13

SF1-201, Transcript of splicing factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SF1, Length 2,850 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-201ENST00000227503 GUCA1CO95843 209 aa13.66□□□□□ -0.22
SF1-201ENST00000227503 IGLV3-27P01718 113 aa13.66□□□□□ -0.22
SF1-201ENST00000227503 HMBSP08397 361 aa13.66□□□□□ -0.22
SF1-201ENST00000227503 OR1E1P30953 314 aa13.66□□□□□ -0.22
SF1-201ENST00000227503 GDF5P43026 501 aa13.66□□□□□ -0.22
SF1-201ENST00000227503 CXCR4P61073 352 aa13.66□□□□□ -0.22
SF1-201ENST00000227503 CAMK2GQ13555 558 aaPredicted RBP13.66□□□□□ -0.22
SF1-201ENST00000227503 PROX2Q3B8N5 592 aa13.66□□□□□ -0.22
SF1-201ENST00000227503 CAMKK1Q8N5S9 505 aa13.66□□□□□ -0.22
SF1-201ENST00000227503 ANGPTL6Q8NI99 470 aa13.66□□□□□ -0.22
SF1-201ENST00000227503 RASSF5Q8WWW0 418 aa13.66□□□□□ -0.22
SF1-201ENST00000227503 SYTL2Q9HCH5 934 aa13.66□□□□□ -0.22
SF1-201ENST00000227503 HEBP1Q9NRV9 189 aa13.66□□□□□ -0.22
SF1-201ENST00000227503 C1orf109Q9NX04 203 aa13.66□□□□□ -0.22
SF1-201ENST00000227503 TMPRSS11EQ9UL52 423 aa13.66□□□□□ -0.22
SF1-201ENST00000227503 ARIH1Q9Y4X5 557 aaPredicted RBP13.66□□□□□ -0.22
SF1-201ENST00000227503 TRAV19A0A0A6YYK7 116 aa13.66□□□□□ -0.22
SF1-201ENST00000227503 LCHNA4D1U4 455 aa13.66□□□□□ -0.22
SF1-201ENST00000227503 A8MX80 341 aa13.66□□□□□ -0.22
SF1-201ENST00000227503 SCAMP3O14828 347 aaKnown RBP13.66□□□□□ -0.22
SF1-201ENST00000227503 POLR1CO15160 346 aaPredicted RBP13.66□□□□□ -0.22
SF1-201ENST00000227503 SLITRK5O94991 958 aa13.66□□□□□ -0.22
SF1-201ENST00000227503 NPPAP01160 153 aa13.66□□□□□ -0.22
SF1-201ENST00000227503 COL6A1P12109 1028 aa13.66□□□□□ -0.22
SF1-201ENST00000227503 AQP1P29972 269 aa13.66□□□□□ -0.22
SF1-201ENST00000227503 AKT1P31749 480 aa13.66□□□□□ -0.22
SF1-201ENST00000227503 ZNF140P52738 457 aaPredicted RBP13.66□□□□□ -0.22
SF1-201ENST00000227503 YBEYP58557 167 aaPredicted RBP13.66□□□□□ -0.22
SF1-201ENST00000227503 ZNF235Q14590 738 aa13.66□□□□□ -0.22
SF1-201ENST00000227503 ALG1LQ6GMV1 187 aa13.66□□□□□ -0.22
SF1-201ENST00000227503 NADSYN1Q6IA69 706 aa13.66□□□□□ -0.22
SF1-201ENST00000227503 CCSAPQ6IQ19 270 aaPredicted RBP13.66□□□□□ -0.22
SF1-201ENST00000227503 SUSD1Q6UWL2 747 aa13.66□□□□□ -0.22
SF1-201ENST00000227503 C17orf99Q6UX52 265 aa13.66□□□□□ -0.22
SF1-201ENST00000227503 TSPYL5Q86VY4 417 aaPredicted RBP13.66□□□□□ -0.22
SF1-201ENST00000227503 C2orf69Q8N8R5 385 aa13.66□□□□□ -0.22
SF1-201ENST00000227503 ASB15Q8WXK1 588 aa13.66□□□□□ -0.22
SF1-201ENST00000227503 TPD52L3Q96J77 140 aa13.66□□□□□ -0.22
SF1-201ENST00000227503 BARHL1Q9BZE3 327 aa13.66□□□□□ -0.22
SF1-201ENST00000227503 SMURF1Q9HCE7 757 aa13.66□□□□□ -0.22
SF1-201ENST00000227503 C12orf4Q9NQ89 552 aa13.66□□□□□ -0.22
SF1-201ENST00000227503 TMEM184CQ9NVA4 438 aa13.66□□□□□ -0.22
SF1-201ENST00000227503 MARCH2Q9P0N8 246 aa13.66□□□□□ -0.22
SF1-201ENST00000227503 HTTP42858 3142 aa13.66□□□□□ -0.22
SF1-201ENST00000227503 KRT6AP02538 564 aa13.65□□□□□ -0.22
SF1-201ENST00000227503 KRT6BP04259 564 aa13.65□□□□□ -0.22
SF1-201ENST00000227503 ITGA2P17301 1181 aa13.65□□□□□ -0.22
SF1-201ENST00000227503 RAD51Q06609 339 aa13.65□□□□□ -0.22
SF1-201ENST00000227503 FCHO2Q0JRZ9 810 aa13.65□□□□□ -0.22
SF1-201ENST00000227503 TAF1CQ15572 869 aaPredicted RBP13.65□□□□□ -0.22
SF1-201ENST00000227503 TOR2AQ5JU69 321 aa13.65□□□□□ -0.22
SF1-201ENST00000227503 STX19Q8N4C7 294 aa13.65□□□□□ -0.22
SF1-201ENST00000227503 C1QTNF3Q9BXJ4 246 aa13.65□□□□□ -0.22
SF1-201ENST00000227503 NUSAP1Q9BXS6 441 aaKnown RBP13.65□□□□□ -0.22
SF1-201ENST00000227503 DPY30Q9C005 99 aa13.65□□□□□ -0.22
SF1-201ENST00000227503 C11orf54Q9H0W9 315 aaPredicted RBP13.65□□□□□ -0.22
SF1-201ENST00000227503 SNTG1Q9NSN8 517 aa13.65□□□□□ -0.22
SF1-201ENST00000227503 NLE1Q9NVX2 485 aaPredicted RBP13.65□□□□□ -0.22
SF1-201ENST00000227503 FBXO9Q9UK97 447 aaPredicted RBP13.65□□□□□ -0.22
SF1-201ENST00000227503 MOXD2PA6NHM9 499 aa13.65□□□□□ -0.22
SF1-201ENST00000227503 KLK8O60259 260 aa13.65□□□□□ -0.22
SF1-201ENST00000227503 CELF2O95319 508 aaKnown RBP13.65□□□□□ -0.22
SF1-201ENST00000227503 PSKH1P11801 424 aa13.65□□□□□ -0.22
SF1-201ENST00000227503 TNFRSF1BP20333 461 aa13.65□□□□□ -0.22
SF1-201ENST00000227503 MAPKAPK2P49137 400 aa13.65□□□□□ -0.22
SF1-201ENST00000227503 ARHGDIAP52565 204 aa13.65□□□□□ -0.22
SF1-201ENST00000227503 DSC1Q08554 894 aa13.65□□□□□ -0.22
SF1-201ENST00000227503 ST3GAL4Q11206 333 aa13.65□□□□□ -0.22
SF1-201ENST00000227503 HYAL2Q12891 473 aa13.65□□□□□ -0.22
SF1-201ENST00000227503 PTPRNQ16849 979 aa13.65□□□□□ -0.22
SF1-201ENST00000227503 ATAD1Q8NBU5 361 aa13.65□□□□□ -0.22
SF1-201ENST00000227503 OR52J3Q8NH60 311 aa13.65□□□□□ -0.22
SF1-201ENST00000227503 UTP15Q8TED0 518 aaKnown RBP13.65□□□□□ -0.22
SF1-201ENST00000227503 UPF1Q92900 1129 aaKnown RBP eCLIP13.65□□□□□ -0.226e-15■■■■□ 22.3
SF1-201ENST00000227503 LINGO1Q96FE5 620 aa13.65□□□□□ -0.22
SF1-201ENST00000227503 RIPOR3Q96MK2 946 aa13.65□□□□□ -0.22
SF1-201ENST00000227503 THUMPD1Q9NXG2 353 aaKnown RBP13.65□□□□□ -0.22
SF1-201ENST00000227503 TAS2R13Q9NYV9 303 aa13.65□□□□□ -0.22
SF1-201ENST00000227503 CCDC59Q9P031 241 aaKnown RBP13.65□□□□□ -0.22
SF1-201ENST00000227503 PSORS1C1Q9UIG5 152 aa13.65□□□□□ -0.22
SF1-201ENST00000227503 HSPB11Q9Y547 144 aa13.65□□□□□ -0.22
SF1-201ENST00000227503 V9GYH0 126 aa13.65□□□□□ -0.22
SF1-201ENST00000227503 ANKRD36A6QL64 1941 aa13.65□□□□□ -0.22
SF1-201ENST00000227503 PNMA8CA0A1B0GUJ8 204 aa13.65□□□□□ -0.22
SF1-201ENST00000227503 WWP2O00308 870 aa13.65□□□□□ -0.22
SF1-201ENST00000227503 ERN1O75460 977 aaKnown RBP13.65□□□□□ -0.22
SF1-201ENST00000227503 RPLP2P05387 115 aaKnown RBP13.65□□□□□ -0.22
SF1-201ENST00000227503 MYL9P24844 172 aa13.65□□□□□ -0.22
SF1-201ENST00000227503 SOX6P35712 828 aa13.65□□□□□ -0.22
SF1-201ENST00000227503 RPS19P39019 145 aaKnown RBP13.65□□□□□ -0.22
SF1-201ENST00000227503 IL12RB1P42701 662 aa13.65□□□□□ -0.22
SF1-201ENST00000227503 ELP6Q0PNE2 266 aa13.65□□□□□ -0.22
SF1-201ENST00000227503 C10orf120Q5SQS8 335 aa13.65□□□□□ -0.22
SF1-201ENST00000227503 CACHD1Q5VU97 1274 aa13.65□□□□□ -0.22
SF1-201ENST00000227503 PDE12Q6L8Q7 609 aaKnown RBP13.65□□□□□ -0.22
SF1-201ENST00000227503 DOK6Q6PKX4 331 aa13.65□□□□□ -0.22
SF1-201ENST00000227503 SOCS4Q8WXH5 440 aa13.65□□□□□ -0.22
SF1-201ENST00000227503 FBXO32Q969P5 355 aa13.65□□□□□ -0.22
SF1-201ENST00000227503 TMCO6Q96DC7 493 aa13.65□□□□□ -0.22
SF1-201ENST00000227503 SYT17Q9BSW7 474 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms