RNA–Protein interactions for RNA: ENST00000225655.5

PFN1-201, Transcript of profilin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PFN1, Length 1,291 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFN1-201ENST00000225655 VPS11Q9H270 941 aa17.24■□□□□ 0.35
PFN1-201ENST00000225655 PARVBQ9HBI1 364 aa17.24■□□□□ 0.35
PFN1-201ENST00000225655 NMRAL1Q9HBL8 299 aa17.24■□□□□ 0.35
PFN1-201ENST00000225655 INTS7Q9NVH2 962 aaKnown RBP17.24■□□□□ 0.35
PFN1-201ENST00000225655 GPR83Q9NYM4 423 aa17.24■□□□□ 0.35
PFN1-201ENST00000225655 SPATA7Q9P0W8 599 aa17.24■□□□□ 0.35
PFN1-201ENST00000225655 NDOR1Q9UHB4 597 aa17.24■□□□□ 0.35
PFN1-201ENST00000225655 TBK1Q9UHD2 729 aa17.24■□□□□ 0.35
PFN1-201ENST00000225655 CIDEBQ9UHD4 219 aa17.24■□□□□ 0.35
PFN1-201ENST00000225655 KLHL20Q9Y2M5 609 aa17.24■□□□□ 0.35
PFN1-201ENST00000225655 PTRH2Q9Y3E5 179 aaKnown RBP17.24■□□□□ 0.35
PFN1-201ENST00000225655 NFS1Q9Y697 457 aa17.24■□□□□ 0.35
PFN1-201ENST00000225655 CCDC189A1A4V9 331 aa17.23■□□□□ 0.35
PFN1-201ENST00000225655 A6NL46 340 aa17.23■□□□□ 0.35
PFN1-201ENST00000225655 PRICKLE3O43900 615 aaPredicted RBP17.23■□□□□ 0.35
PFN1-201ENST00000225655 DPM1O60762 260 aa17.23■□□□□ 0.35
PFN1-201ENST00000225655 SORBS2O94875 1100 aaKnown RBP17.23■□□□□ 0.35
PFN1-201ENST00000225655 FKBP9O95302 570 aa17.23■□□□□ 0.35
PFN1-201ENST00000225655 SYF2O95926 243 aaKnown RBP17.23■□□□□ 0.35
PFN1-201ENST00000225655 LTA4HP09960 611 aaKnown RBP17.23■□□□□ 0.35
PFN1-201ENST00000225655 SLC35E2BP0CK96 405 aa17.23■□□□□ 0.35
PFN1-201ENST00000225655 BDKRB1P46663 353 aa17.23■□□□□ 0.35
PFN1-201ENST00000225655 ARSFP54793 590 aa17.23■□□□□ 0.35
PFN1-201ENST00000225655 CSHL1Q14406 222 aa17.23■□□□□ 0.35
PFN1-201ENST00000225655 ZC3H12BQ5HYM0 836 aaKnown RBP17.23■□□□□ 0.35
PFN1-201ENST00000225655 FCRL6Q6DN72 434 aa17.23■□□□□ 0.35
PFN1-201ENST00000225655 CYHR1Q6ZMK1 362 aa17.23■□□□□ 0.35
PFN1-201ENST00000225655 TIFABQ6ZNK6 161 aa17.23■□□□□ 0.35
PFN1-201ENST00000225655 FAM26EQ8N5C1 309 aa17.23■□□□□ 0.35
PFN1-201ENST00000225655 C2orf73Q8N5S3 287 aaPredicted RBP17.23■□□□□ 0.35
PFN1-201ENST00000225655 EPS8L3Q8TE67 593 aaKnown RBP17.23■□□□□ 0.35
PFN1-201ENST00000225655 DENND1AQ8TEH3 1009 aa17.23■□□□□ 0.35
PFN1-201ENST00000225655 DLG3Q92796 817 aa17.23■□□□□ 0.35
PFN1-201ENST00000225655 ISL2Q96A47 359 aa17.23■□□□□ 0.35
PFN1-201ENST00000225655 FER1L6-AS2Q96M78 137 aa17.23■□□□□ 0.35
PFN1-201ENST00000225655 SMAD5Q99717 465 aaKnown RBP17.23■□□□□ 0.35
PFN1-201ENST00000225655 ENAMQ9NRM1 1142 aa17.23■□□□□ 0.35
PFN1-201ENST00000225655 CAMSAP3Q9P1Y5 1249 aaPredicted RBP17.23■□□□□ 0.35
PFN1-201ENST00000225655 ANKMY1Q9P2S6 941 aa17.23■□□□□ 0.35
PFN1-201ENST00000225655 NOVA2Q9UNW9 492 aaKnown RBP17.23■□□□□ 0.35
PFN1-201ENST00000225655 RUVBL2Q9Y230 463 aaKnown RBP17.23■□□□□ 0.35
PFN1-201ENST00000225655 ANKRD12Q6UB98 2062 aa17.23■□□□□ 0.35
PFN1-201ENST00000225655 RELNP78509 3460 aa17.23■□□□□ 0.35
PFN1-201ENST00000225655 CYSRT1A8MQ03 144 aa17.22■□□□□ 0.35
PFN1-201ENST00000225655 ARHGEF33A8MVX0 844 aa17.22■□□□□ 0.35
PFN1-201ENST00000225655 GFYI3L273 518 aa17.22■□□□□ 0.35
PFN1-201ENST00000225655 TSPAN12O95859 305 aa17.22■□□□□ 0.35
PFN1-201ENST00000225655 IGHEP01854 428 aa17.22■□□□□ 0.35
PFN1-201ENST00000225655 ALDOAP04075 364 aaKnown RBP17.22■□□□□ 0.35
PFN1-201ENST00000225655 S100BP04271 92 aaPredicted RBP17.22■□□□□ 0.35
PFN1-201ENST00000225655 C2P06681 752 aa17.22■□□□□ 0.35
PFN1-201ENST00000225655 COL6A2P12110 1019 aa17.22■□□□□ 0.35
PFN1-201ENST00000225655 GCAP28676 217 aa17.22■□□□□ 0.35
PFN1-201ENST00000225655 AP1S2P56377 157 aa17.22■□□□□ 0.35
PFN1-201ENST00000225655 SRSF1Q07955 248 aaKnown RBP eCLIP17.22■□□□□ 0.35
PFN1-201ENST00000225655 SF1Q15637 639 aaKnown RBP17.22■□□□□ 0.35
PFN1-201ENST00000225655 TSNAXIP1Q2TAA8 658 aa17.22■□□□□ 0.35
PFN1-201ENST00000225655 BEND6Q5SZJ8 279 aaPredicted RBP17.22■□□□□ 0.35
PFN1-201ENST00000225655 JMJD6Q6NYC1 403 aaPredicted RBP17.22■□□□□ 0.35
PFN1-201ENST00000225655 FIGLAQ6QHK4 219 aa17.22■□□□□ 0.35
PFN1-201ENST00000225655 TAX1BP1Q86VP1 789 aa17.22■□□□□ 0.35
PFN1-201ENST00000225655 LCA5Q86VQ0 697 aa17.22■□□□□ 0.35
PFN1-201ENST00000225655 EFCAB3Q8N7B9 438 aa17.22■□□□□ 0.35
PFN1-201ENST00000225655 LMNTD1Q8N9Z9 388 aa17.22■□□□□ 0.35
PFN1-201ENST00000225655 OR9A1PQ8NGU1 263 aa17.22■□□□□ 0.35
PFN1-201ENST00000225655 HMGCLL1Q8TB92 370 aa17.22■□□□□ 0.35
PFN1-201ENST00000225655 CPT1CQ8TCG5 803 aa17.22■□□□□ 0.35
PFN1-201ENST00000225655 ACMSDQ8TDX5 336 aa17.22■□□□□ 0.35
PFN1-201ENST00000225655 ATL1Q8WXF7 558 aa17.22■□□□□ 0.35
PFN1-201ENST00000225655 ZUFSPQ96AP4 578 aa17.22■□□□□ 0.35
PFN1-201ENST00000225655 PTERQ96BW5 349 aa17.22■□□□□ 0.35
PFN1-201ENST00000225655 NUP210LQ5VU65 1888 aa17.21■□□□□ 0.35
PFN1-201ENST00000225655 A0A1B0GX78 115 aa17.21■□□□□ 0.35
PFN1-201ENST00000225655 HMX2A2RU54 273 aa17.21■□□□□ 0.35
PFN1-201ENST00000225655 NPEPPSL1A6NEC2 478 aa17.21■□□□□ 0.35
PFN1-201ENST00000225655 GOLGA6L10A6NI86 522 aa17.21■□□□□ 0.35
PFN1-201ENST00000225655 TARM1B6A8C7 271 aa17.21■□□□□ 0.35
PFN1-201ENST00000225655 MYO1CO00159 1063 aa17.21■□□□□ 0.35
PFN1-201ENST00000225655 PEX12O00623 359 aa17.21■□□□□ 0.35
PFN1-201ENST00000225655 CNOT3O75175 753 aaKnown RBP17.21■□□□□ 0.35
PFN1-201ENST00000225655 VPS4BO75351 444 aa17.21■□□□□ 0.35
PFN1-201ENST00000225655 ONECUT2O95948 504 aa17.21■□□□□ 0.35
PFN1-201ENST00000225655 ITGAXP20702 1163 aa17.21■□□□□ 0.35
PFN1-201ENST00000225655 ALAS2P22557 587 aa17.21■□□□□ 0.35
PFN1-201ENST00000225655 PGGT1BP53609 377 aa17.21■□□□□ 0.35
PFN1-201ENST00000225655 SLC9A5Q14940 896 aa17.21■□□□□ 0.35
PFN1-201ENST00000225655 ARHGAP19Q14CB8 494 aa17.21■□□□□ 0.35
PFN1-201ENST00000225655 KRT71Q3SY84 523 aa17.21■□□□□ 0.35
PFN1-201ENST00000225655 TCTE1Q5JU00 501 aa17.21■□□□□ 0.35
PFN1-201ENST00000225655 DCAF10Q5QP82 559 aa17.21■□□□□ 0.35
PFN1-201ENST00000225655 VWA5B1Q5TIE3 1220 aa17.21■□□□□ 0.35
PFN1-201ENST00000225655 YOD1Q5VVQ6 348 aaPredicted RBP17.21■□□□□ 0.35
PFN1-201ENST00000225655 TMEM207Q6UWW9 146 aa17.21■□□□□ 0.35
PFN1-201ENST00000225655 LRIG3Q6UXM1 1119 aa17.21■□□□□ 0.35
PFN1-201ENST00000225655 CLEC1AQ8NC01 280 aa17.21■□□□□ 0.35
PFN1-201ENST00000225655 GALNT11Q8NCW6 608 aa17.21■□□□□ 0.35
PFN1-201ENST00000225655 OR2W6PQ8NHA6 318 aa17.21■□□□□ 0.35
PFN1-201ENST00000225655 STAG3L4Q8TBR4 150 aa17.21■□□□□ 0.35
PFN1-201ENST00000225655 ANKRD49Q8WVL7 239 aa17.21■□□□□ 0.35
PFN1-201ENST00000225655 FKBP10Q96AY3 582 aa17.21■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms