RNA–Protein interactions for RNA: ENST00000216774.10

SRP54-201, Transcript of signal recognition particle 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRP54, Length 2,279 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-201ENST00000216774 TGFBR2P37173 567 aa12.87□□□□□ -0.35
SRP54-201ENST00000216774 NCS1P62166 190 aa12.87□□□□□ -0.35
SRP54-201ENST00000216774 TUBA1BP68363 451 aa12.87□□□□□ -0.35
SRP54-201ENST00000216774 TCTN1Q2MV58 587 aa12.87□□□□□ -0.35
SRP54-201ENST00000216774 IQCCQ4KMZ1 466 aa12.87□□□□□ -0.35
SRP54-201ENST00000216774 AGAP7PQ5VUJ5 663 aa12.87□□□□□ -0.35
SRP54-201ENST00000216774 PLEKHG7Q6ZR37 379 aa12.87□□□□□ -0.35
SRP54-201ENST00000216774 TUBA1AQ71U36 451 aa12.87□□□□□ -0.35
SRP54-201ENST00000216774 GALNT10Q86SR1 603 aa12.87□□□□□ -0.35
SRP54-201ENST00000216774 PLD3Q8IV08 490 aa12.87□□□□□ -0.35
SRP54-201ENST00000216774 VRK3Q8IV63 474 aa12.87□□□□□ -0.35
SRP54-201ENST00000216774 CPXM2Q8N436 756 aa12.87□□□□□ -0.35
SRP54-201ENST00000216774 FIBINQ8TAL6 211 aa12.87□□□□□ -0.35
SRP54-201ENST00000216774 C7orf34Q96L11 122 aa12.87□□□□□ -0.35
SRP54-201ENST00000216774 DPH2Q9BQC3 489 aaPredicted RBP12.87□□□□□ -0.35
SRP54-201ENST00000216774 TPT1P8Q9HAU6 139 aa12.87□□□□□ -0.35
SRP54-201ENST00000216774 ADPRHL2Q9NX46 363 aa12.87□□□□□ -0.35
SRP54-201ENST00000216774 MAPRE3Q9UPY8 281 aa12.87□□□□□ -0.35
SRP54-201ENST00000216774 WDR37Q9Y2I8 494 aa12.87□□□□□ -0.35
SRP54-201ENST00000216774 PADI2Q9Y2J8 665 aa12.87□□□□□ -0.35
SRP54-201ENST00000216774 PLXNB3Q9ULL4 1909 aa12.87□□□□□ -0.35
SRP54-201ENST00000216774 MICAL3Q7RTP6 2002 aa12.87□□□□□ -0.35
SRP54-201ENST00000216774 PRRG1O14668 218 aa12.87□□□□□ -0.35
SRP54-201ENST00000216774 C1QCP02747 245 aa12.87□□□□□ -0.35
SRP54-201ENST00000216774 ABCB1P08183 1280 aaPredicted RBP12.87□□□□□ -0.35
SRP54-201ENST00000216774 HSD3B1P14060 373 aa12.87□□□□□ -0.35
SRP54-201ENST00000216774 ATP1B2P14415 290 aaPredicted RBP12.87□□□□□ -0.35
SRP54-201ENST00000216774 LHCGRP22888 699 aa12.87□□□□□ -0.35
SRP54-201ENST00000216774 HSD3B2P26439 372 aa12.87□□□□□ -0.35
SRP54-201ENST00000216774 PXNP49023 591 aaPredicted RBP12.87□□□□□ -0.35
SRP54-201ENST00000216774 PFN3P60673 137 aa12.87□□□□□ -0.35
SRP54-201ENST00000216774 IRF8Q02556 426 aa12.87□□□□□ -0.35
SRP54-201ENST00000216774 CREMQ03060 361 aa12.87□□□□□ -0.35
SRP54-201ENST00000216774 MPPE1Q53F39 396 aa12.87□□□□□ -0.35
SRP54-201ENST00000216774 TMEM236Q5W0B7 351 aa12.87□□□□□ -0.35
SRP54-201ENST00000216774 ENTHD1Q8IYW4 607 aa12.87□□□□□ -0.35
SRP54-201ENST00000216774 KIAA1958Q8N8K9 716 aa12.87□□□□□ -0.35
SRP54-201ENST00000216774 WDR20Q8TBZ3 569 aa12.87□□□□□ -0.35
SRP54-201ENST00000216774 APH1BQ8WW43 257 aa12.87□□□□□ -0.35
SRP54-201ENST00000216774 SLC38A4Q969I6 547 aa12.87□□□□□ -0.35
SRP54-201ENST00000216774 ZHX1-C8orf76Q96EF9 292 aa12.87□□□□□ -0.35
SRP54-201ENST00000216774 ITPAQ9BY32 194 aa12.87□□□□□ -0.35
SRP54-201ENST00000216774 ALOXE3Q9BYJ1 711 aa12.87□□□□□ -0.35
SRP54-201ENST00000216774 ABCG8Q9H221 673 aa12.87□□□□□ -0.35
SRP54-201ENST00000216774 CHST8Q9H2A9 424 aa12.87□□□□□ -0.35
SRP54-201ENST00000216774 SUV39H2Q9H5I1 410 aa12.87□□□□□ -0.35
SRP54-201ENST00000216774 RASSF1Q9NS23 344 aa12.87□□□□□ -0.35
SRP54-201ENST00000216774 BTNL2Q9UIR0 455 aa12.87□□□□□ -0.35
SRP54-201ENST00000216774 ERVK-11Q9UQG0 969 aa12.87□□□□□ -0.35
SRP54-201ENST00000216774 PCDHGB3Q9Y5G1 929 aa12.87□□□□□ -0.35
SRP54-201ENST00000216774 HTTP42858 3142 aa12.87□□□□□ -0.35
SRP54-201ENST00000216774 EFCAB9A8MZ26 197 aa12.86□□□□□ -0.35
SRP54-201ENST00000216774 SCAMP2O15127 329 aaKnown RBP12.86□□□□□ -0.35
SRP54-201ENST00000216774 SUV39H1O43463 412 aa12.86□□□□□ -0.35
SRP54-201ENST00000216774 MYO1DO94832 1006 aa12.86□□□□□ -0.35
SRP54-201ENST00000216774 UGT2B10P36537 528 aa12.86□□□□□ -0.35
SRP54-201ENST00000216774 ASMTP46597 345 aa12.86□□□□□ -0.35
SRP54-201ENST00000216774 PPP5CP53041 499 aa12.86□□□□□ -0.35
SRP54-201ENST00000216774 EPHB3P54753 998 aa12.86□□□□□ -0.35
SRP54-201ENST00000216774 KCNJ10P78508 379 aa12.86□□□□□ -0.35
SRP54-201ENST00000216774 SEMG2Q02383 582 aa12.86□□□□□ -0.35
SRP54-201ENST00000216774 ELP6Q0PNE2 266 aa12.86□□□□□ -0.35
SRP54-201ENST00000216774 MLIPQ5VWP3 458 aa12.86□□□□□ -0.35
SRP54-201ENST00000216774 TXNDC8Q6A555 127 aa12.86□□□□□ -0.35
SRP54-201ENST00000216774 PDE12Q6L8Q7 609 aaKnown RBP12.86□□□□□ -0.35
SRP54-201ENST00000216774 NCCRP1Q6ZVX7 275 aaPredicted RBP12.86□□□□□ -0.35
SRP54-201ENST00000216774 AHSA2Q719I0 299 aa12.86□□□□□ -0.35
SRP54-201ENST00000216774 CAMKMTQ7Z624 323 aa12.86□□□□□ -0.35
SRP54-201ENST00000216774 RASGRP3Q8IV61 690 aa12.86□□□□□ -0.35
SRP54-201ENST00000216774 CLECL1Q8IZS7 167 aa12.86□□□□□ -0.35
SRP54-201ENST00000216774 RHOXF1Q8NHV9 184 aa12.86□□□□□ -0.35
SRP54-201ENST00000216774 C11orf24Q96F05 449 aaPredicted RBP12.86□□□□□ -0.35
SRP54-201ENST00000216774 MYOCQ99972 504 aa12.86□□□□□ -0.35
SRP54-201ENST00000216774 DUSP26Q9BV47 211 aa12.86□□□□□ -0.35
SRP54-201ENST00000216774 DSN1Q9H410 356 aa12.86□□□□□ -0.35
SRP54-201ENST00000216774 PLCXD1Q9NUJ7 323 aa12.86□□□□□ -0.35
SRP54-201ENST00000216774 SIRT5Q9NXA8 310 aa12.86□□□□□ -0.35
SRP54-201ENST00000216774 PCDHGA6Q9Y5G7 932 aa12.86□□□□□ -0.35
SRP54-201ENST00000216774 CPSF4O95639 269 aaKnown RBP12.86□□□□□ -0.35
SRP54-201ENST00000216774 LAMP1P11279 417 aa12.86□□□□□ -0.35
SRP54-201ENST00000216774 SRCP12931 536 aa12.86□□□□□ -0.35
SRP54-201ENST00000216774 CD40LGP29965 261 aa12.86□□□□□ -0.35
SRP54-201ENST00000216774 CD70P32970 193 aa12.86□□□□□ -0.35
SRP54-201ENST00000216774 PCGF2P35227 344 aa12.86□□□□□ -0.35
SRP54-201ENST00000216774 SPINT3P49223 89 aa12.86□□□□□ -0.35
SRP54-201ENST00000216774 ACSM2AQ08AH3 577 aa12.86□□□□□ -0.35
SRP54-201ENST00000216774 LRRC74AQ0VAA2 488 aa12.86□□□□□ -0.35
SRP54-201ENST00000216774 ACSM2BQ68CK6 577 aa12.86□□□□□ -0.35
SRP54-201ENST00000216774 HTR3DQ70Z44 454 aa12.86□□□□□ -0.35
SRP54-201ENST00000216774 VPS37AQ8NEZ2 397 aa12.86□□□□□ -0.35
SRP54-201ENST00000216774 TPD52L3Q96J77 140 aa12.86□□□□□ -0.35
SRP54-201ENST00000216774 CPEB1Q9BZB8 566 aaKnown RBP12.86□□□□□ -0.35
SRP54-201ENST00000216774 ATG10Q9H0Y0 220 aa12.86□□□□□ -0.35
SRP54-201ENST00000216774 BRF2Q9HAW0 419 aa12.86□□□□□ -0.35
SRP54-201ENST00000216774 ZNF334Q9HCZ1 680 aaPredicted RBP12.86□□□□□ -0.35
SRP54-201ENST00000216774 ITGB1BP2Q9UKP3 347 aa12.86□□□□□ -0.35
SRP54-201ENST00000216774 TMPRSS11EQ9UL52 423 aa12.86□□□□□ -0.35
SRP54-201ENST00000216774 FZD4Q9ULV1 537 aa12.86□□□□□ -0.35
SRP54-201ENST00000216774 C1orf226A1L170 272 aa12.85□□□□□ -0.35
SRP54-201ENST00000216774 H0YIV9 168 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms