RNA–Protein interactions for RNA: ENST00000216513.4

SIX4-201, Transcript of SIX homeobox 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIX4, Length 6,285 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4-201ENST00000216513 B3GAT2Q9NPZ5 323 aa13.34□□□□□ -0.27
SIX4-201ENST00000216513 NLE1Q9NVX2 485 aaPredicted RBP13.34□□□□□ -0.27
SIX4-201ENST00000216513 SMIM31A0A1B0GVY4 71 aa13.34□□□□□ -0.27
SIX4-201ENST00000216513 SCO2O43819 266 aa13.34□□□□□ -0.27
SIX4-201ENST00000216513 ECI2O75521 394 aa13.34□□□□□ -0.27
SIX4-201ENST00000216513 CHRNGP07510 517 aa13.34□□□□□ -0.27
SIX4-201ENST00000216513 GMPRP36959 345 aa13.34□□□□□ -0.27
SIX4-201ENST00000216513 SUOXP51687 545 aa13.34□□□□□ -0.27
SIX4-201ENST00000216513 SLC7A9P82251 487 aa13.34□□□□□ -0.27
SIX4-201ENST00000216513 PCDH1Q08174 1060 aa13.34□□□□□ -0.27
SIX4-201ENST00000216513 NOXRED1Q6NXP6 359 aa13.34□□□□□ -0.27
SIX4-201ENST00000216513 C1orf52Q8N6N3 182 aaKnown RBP13.34□□□□□ -0.27
SIX4-201ENST00000216513 SHISA4Q96DD7 197 aa13.34□□□□□ -0.27
SIX4-201ENST00000216513 PLEKHG4BQ96PX9 1271 aa13.34□□□□□ -0.27
SIX4-201ENST00000216513 DPH7Q9BTV6 452 aa13.34□□□□□ -0.27
SIX4-201ENST00000216513 USP29Q9HBJ7 922 aa13.34□□□□□ -0.27
SIX4-201ENST00000216513 C1orf109Q9NX04 203 aa13.34□□□□□ -0.27
SIX4-201ENST00000216513 SAMHD1Q9Y3Z3 626 aaKnown RBP13.34□□□□□ -0.27
SIX4-201ENST00000216513 CIB4A0PJX0 185 aa13.34□□□□□ -0.27
SIX4-201ENST00000216513 FEZF1A0PJY2 475 aa13.34□□□□□ -0.27
SIX4-201ENST00000216513 SRFP11831 508 aa13.34□□□□□ -0.27
SIX4-201ENST00000216513 CDC42P60953 191 aa13.34□□□□□ -0.27
SIX4-201ENST00000216513 IRF4Q15306 451 aa13.34□□□□□ -0.27
SIX4-201ENST00000216513 NSDHLQ15738 373 aa13.34□□□□□ -0.27
SIX4-201ENST00000216513 BTBD16Q32M84 506 aa13.34□□□□□ -0.27
SIX4-201ENST00000216513 PTCHD3Q3KNS1 767 aa13.34□□□□□ -0.27
SIX4-201ENST00000216513 FAM160A2Q8N612 972 aaPredicted RBP13.34□□□□□ -0.27
SIX4-201ENST00000216513 CAPSLQ8WWF8 208 aa13.34□□□□□ -0.27
SIX4-201ENST00000216513 SLC44A1Q8WWI5 657 aa13.34□□□□□ -0.27
SIX4-201ENST00000216513 MSANTD3Q96H12 275 aa13.34□□□□□ -0.27
SIX4-201ENST00000216513 PEX11GQ96HA9 241 aa13.34□□□□□ -0.27
SIX4-201ENST00000216513 EDEM2Q9BV94 578 aa13.34□□□□□ -0.27
SIX4-201ENST00000216513 R4GN57 208 aa13.34□□□□□ -0.27
SIX4-201ENST00000216513 TMEM233B4DJY2 109 aa13.33□□□□□ -0.28
SIX4-201ENST00000216513 NOBOXO60393 691 aa13.33□□□□□ -0.28
SIX4-201ENST00000216513 MYCLP1P12525 358 aaPredicted RBP13.33□□□□□ -0.28
SIX4-201ENST00000216513 RPS13P62277 151 aaKnown RBP13.33□□□□□ -0.28
SIX4-201ENST00000216513 PDK3Q15120 406 aa13.33□□□□□ -0.28
SIX4-201ENST00000216513 ZYG11AQ6WRX3 759 aa13.33□□□□□ -0.28
SIX4-201ENST00000216513 RBM44Q6ZP01 1051 aaKnown RBP13.33□□□□□ -0.28
SIX4-201ENST00000216513 ATCAYQ86WG3 371 aa13.33□□□□□ -0.28
SIX4-201ENST00000216513 GATSQ8NAP1 163 aa13.33□□□□□ -0.28
SIX4-201ENST00000216513 PSMA8Q8TAA3 256 aa13.33□□□□□ -0.28
SIX4-201ENST00000216513 ZNF184Q99676 751 aaPredicted RBP13.33□□□□□ -0.28
SIX4-201ENST00000216513 GORASP1Q9BQQ3 440 aa13.33□□□□□ -0.28
SIX4-201ENST00000216513 CRB3Q9BUF7 120 aa13.33□□□□□ -0.28
SIX4-201ENST00000216513 ACAD8Q9UKU7 415 aa13.33□□□□□ -0.28
SIX4-201ENST00000216513 A0A075B6Q4 140 aa13.33□□□□□ -0.28
SIX4-201ENST00000216513 HYKKA2RU49 373 aa13.33□□□□□ -0.28
SIX4-201ENST00000216513 PSIP1O75475 530 aaKnown RBP13.33□□□□□ -0.28
SIX4-201ENST00000216513 DCAF12Q5T6F0 453 aa13.33□□□□□ -0.28
SIX4-201ENST00000216513 RTN4RL1Q86UN2 441 aaPredicted RBP13.33□□□□□ -0.28
SIX4-201ENST00000216513 PROSER1Q86XN7 944 aa13.33□□□□□ -0.28
SIX4-201ENST00000216513 TRNT1Q96Q11 434 aaKnown RBP13.33□□□□□ -0.28
SIX4-201ENST00000216513 C1QTNF1Q9BXJ1 281 aa13.33□□□□□ -0.28
SIX4-201ENST00000216513 VPS29Q9UBQ0 182 aa13.33□□□□□ -0.28
SIX4-201ENST00000216513 ZFR2Q9UPR6 939 aaKnown RBP13.33□□□□□ -0.28
SIX4-201ENST00000216513 CCR10P46092 362 aa13.33□□□□□ -0.28
SIX4-201ENST00000216513 SLC25A11Q02978 314 aaKnown RBP13.33□□□□□ -0.28
SIX4-201ENST00000216513 FOLH1Q04609 750 aa13.33□□□□□ -0.28
SIX4-201ENST00000216513 RAET1LQ5VY80 246 aa13.33□□□□□ -0.28
SIX4-201ENST00000216513 HMGN2P46Q86SG4 172 aa13.33□□□□□ -0.28
SIX4-201ENST00000216513 SCD5Q86SK9 330 aa13.33□□□□□ -0.28
SIX4-201ENST00000216513 CMASQ8NFW8 434 aaPredicted RBP13.33□□□□□ -0.28
SIX4-201ENST00000216513 RADILQ96JH8 1075 aa13.33□□□□□ -0.28
SIX4-201ENST00000216513 ADGRE2Q9UHX3 823 aa13.33□□□□□ -0.28
SIX4-201ENST00000216513 YBX2Q9Y2T7 364 aaKnown RBP13.33□□□□□ -0.28
SIX4-201ENST00000216513 OAS3Q9Y6K5 1087 aaKnown RBP13.33□□□□□ -0.28
SIX4-201ENST00000216513 AQP9O43315 295 aa13.33□□□□□ -0.28
SIX4-201ENST00000216513 ASNA1O43681 348 aa13.33□□□□□ -0.28
SIX4-201ENST00000216513 RPLP0P05388 317 aaKnown RBP13.33□□□□□ -0.28
SIX4-201ENST00000216513 PBX1P40424 430 aa13.33□□□□□ -0.28
SIX4-201ENST00000216513 GRM7Q14831 915 aa13.33□□□□□ -0.28
SIX4-201ENST00000216513 DCP2Q8IU60 420 aaKnown RBP13.33□□□□□ -0.28
SIX4-201ENST00000216513 ASB15Q8WXK1 588 aa13.33□□□□□ -0.28
SIX4-201ENST00000216513 SPAG4Q9NPE6 437 aa13.33□□□□□ -0.28
SIX4-201ENST00000216513 RBMX2Q9Y388 322 aaKnown RBP13.33□□□□□ -0.28
SIX4-201ENST00000216513 SEC14L5O43304 696 aa13.33□□□□□ -0.28
SIX4-201ENST00000216513 UNC5CO95185 931 aa13.33□□□□□ -0.28
SIX4-201ENST00000216513 HMGCS1Q01581 520 aa13.33□□□□□ -0.28
SIX4-201ENST00000216513 SPEM2Q0P670 501 aa13.33□□□□□ -0.28
SIX4-201ENST00000216513 TRAF3Q13114 568 aa13.33□□□□□ -0.28
SIX4-201ENST00000216513 SMARCD3Q6STE5 483 aa13.33□□□□□ -0.28
SIX4-201ENST00000216513 NAXEQ8NCW5 288 aa13.33□□□□□ -0.28
SIX4-201ENST00000216513 ELSPBP1Q96BH3 223 aa13.33□□□□□ -0.28
SIX4-201ENST00000216513 RDH14Q9HBH5 336 aa13.33□□□□□ -0.28
SIX4-201ENST00000216513 CAPN8A6NHC0 703 aa13.32□□□□□ -0.28
SIX4-201ENST00000216513 PIP5K1BO14986 540 aa13.32□□□□□ -0.28
SIX4-201ENST00000216513 ITGB7P26010 798 aa13.32□□□□□ -0.28
SIX4-201ENST00000216513 NUDT1P36639 197 aa13.32□□□□□ -0.28
SIX4-201ENST00000216513 TTC23Q5W5X9 447 aa13.32□□□□□ -0.28
SIX4-201ENST00000216513 ZCCHC7Q8N3Z6 543 aaKnown RBP13.32□□□□□ -0.28
SIX4-201ENST00000216513 RASGEF1AQ8N9B8 481 aa13.32□□□□□ -0.28
SIX4-201ENST00000216513 COPG2Q9UBF2 871 aa13.32□□□□□ -0.28
SIX4-201ENST00000216513 PCDHGA2Q9Y5H1 932 aa13.32□□□□□ -0.28
SIX4-201ENST00000216513 TOGARAM1Q9Y4F4 1720 aa13.32□□□□□ -0.28
SIX4-201ENST00000216513 AGPSO00116 658 aa13.32□□□□□ -0.28
SIX4-201ENST00000216513 SMAD6O43541 496 aaKnown RBP13.32□□□□□ -0.28
SIX4-201ENST00000216513 NR2F6P10588 404 aa13.32□□□□□ -0.28
SIX4-201ENST00000216513 ZNF823P16415 610 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 65.9 ms