RNA–Protein interactions for RNA: ENST00000040584.5

HOXC8-201, Transcript of homeobox C8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC8, Length 1,889 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC8-201ENST00000040584 PIGKQ92643 395 aa21.24■□□□□ 0.99
HOXC8-201ENST00000040584 ZC3H10Q96K80 434 aaKnown RBP21.24■□□□□ 0.99
HOXC8-201ENST00000040584 CCDC177Q9NQR7 707 aaPredicted RBP21.24■□□□□ 0.99
HOXC8-201ENST00000040584 SPATA7Q9P0W8 599 aa21.24■□□□□ 0.99
HOXC8-201ENST00000040584 TMEM181Q9P2C4 612 aa21.24■□□□□ 0.99
HOXC8-201ENST00000040584 PRAMEF4O60810 478 aa21.23■□□□□ 0.99
HOXC8-201ENST00000040584 CAPN1P07384 714 aa21.23■□□□□ 0.99
HOXC8-201ENST00000040584 HSD17B2P37059 387 aa21.23■□□□□ 0.99
HOXC8-201ENST00000040584 ZNF528Q3MIS6 628 aa21.23■□□□□ 0.99
HOXC8-201ENST00000040584 PRAMEF9Q5VWM5 478 aa21.23■□□□□ 0.99
HOXC8-201ENST00000040584 C8orf82Q6P1X6 216 aaPredicted RBP21.23■□□□□ 0.99
HOXC8-201ENST00000040584 NAGSQ8N159 534 aa21.23■□□□□ 0.99
HOXC8-201ENST00000040584 CHCHD4Q8N4Q1 142 aa21.23■□□□□ 0.99
HOXC8-201ENST00000040584 TMEM102Q8N9M5 508 aaPredicted RBP21.23■□□□□ 0.99
HOXC8-201ENST00000040584 LINC01555Q8NAE3 123 aa21.23■□□□□ 0.99
HOXC8-201ENST00000040584 HMGCLL1Q8TB92 370 aa21.23■□□□□ 0.99
HOXC8-201ENST00000040584 METTL6Q8TCB7 284 aa21.23■□□□□ 0.99
HOXC8-201ENST00000040584 TSPEARQ8WU66 669 aa21.23■□□□□ 0.99
HOXC8-201ENST00000040584 NCSTNQ92542 709 aa21.23■□□□□ 0.99
HOXC8-201ENST00000040584 PKP2Q99959 881 aa21.23■□□□□ 0.99
HOXC8-201ENST00000040584 SH3GL3Q99963 347 aa21.23■□□□□ 0.99
HOXC8-201ENST00000040584 ACTR8Q9H981 624 aa21.23■□□□□ 0.99
HOXC8-201ENST00000040584 VCX3AQ9NNX9 186 aa21.23■□□□□ 0.99
HOXC8-201ENST00000040584 SPASTQ9UBP0 616 aa21.23■□□□□ 0.99
HOXC8-201ENST00000040584 ICKQ9UPZ9 632 aa21.23■□□□□ 0.99
HOXC8-201ENST00000040584 SNX11Q9Y5W9 270 aa21.23■□□□□ 0.99
HOXC8-201ENST00000040584 PTGDR2Q9Y5Y4 395 aa21.23■□□□□ 0.99
HOXC8-201ENST00000040584 TNRC6BQ9UPQ9 1833 aaKnown RBP21.23■□□□□ 0.99
HOXC8-201ENST00000040584 C15orf38-AP3S2A0A0A6YYH1 394 aa21.22■□□□□ 0.99
HOXC8-201ENST00000040584 PIP5K1BO14986 540 aa21.22■□□□□ 0.99
HOXC8-201ENST00000040584 SDC3O75056 442 aa21.22■□□□□ 0.99
HOXC8-201ENST00000040584 TNFAIP8O95379 198 aa21.22■□□□□ 0.99
HOXC8-201ENST00000040584 CLDN9O95484 217 aa21.22■□□□□ 0.99
HOXC8-201ENST00000040584 NPPBP16860 134 aa21.22■□□□□ 0.99
HOXC8-201ENST00000040584 NDUFS1P28331 727 aa21.22■□□□□ 0.99
HOXC8-201ENST00000040584 SLC7A1P30825 629 aa21.22■□□□□ 0.99
HOXC8-201ENST00000040584 CNR2P34972 360 aa21.22■□□□□ 0.99
HOXC8-201ENST00000040584 RAB28P51157 221 aa21.22■□□□□ 0.99
HOXC8-201ENST00000040584 HNRNPKP61978 463 aaKnown RBP eCLIP21.22■□□□□ 0.99
HOXC8-201ENST00000040584 BNC1Q01954 994 aa21.22■□□□□ 0.99
HOXC8-201ENST00000040584 TLR1Q15399 786 aa21.22■□□□□ 0.99
HOXC8-201ENST00000040584 ADRM1Q16186 407 aa21.22■□□□□ 0.99
HOXC8-201ENST00000040584 COQ5Q5HYK3 327 aa21.22■□□□□ 0.99
HOXC8-201ENST00000040584 THEMIS2Q5TEJ8 643 aa21.22■□□□□ 0.99
HOXC8-201ENST00000040584 PAOXQ6QHF9 649 aa21.22■□□□□ 0.99
HOXC8-201ENST00000040584 ARPINQ7Z6K5 226 aa21.22■□□□□ 0.99
HOXC8-201ENST00000040584 RAB42Q8N4Z0 105 aa21.22■□□□□ 0.99
HOXC8-201ENST00000040584 RNF148Q8N7C7 305 aa21.22■□□□□ 0.99
HOXC8-201ENST00000040584 GOLM1Q8NBJ4 401 aa21.22■□□□□ 0.99
HOXC8-201ENST00000040584 ZBTB44Q8NCP5 570 aa21.22■□□□□ 0.99
HOXC8-201ENST00000040584 C3orf30Q96M34 536 aa21.22■□□□□ 0.99
HOXC8-201ENST00000040584 TRIM4Q9C037 500 aa21.22■□□□□ 0.99
HOXC8-201ENST00000040584 KIR3DX1Q9H7L2 352 aa21.22■□□□□ 0.99
HOXC8-201ENST00000040584 TRPS1Q9UHF7 1281 aa21.22■□□□□ 0.99
HOXC8-201ENST00000040584 BTRCQ9Y297 605 aa21.22■□□□□ 0.99
HOXC8-201ENST00000040584 E7EQ34 232 aa21.22■□□□□ 0.99
HOXC8-201ENST00000040584 YY2O15391 372 aa21.22■□□□□ 0.99
HOXC8-201ENST00000040584 HGFP14210 728 aa21.22■□□□□ 0.99
HOXC8-201ENST00000040584 PCDH1Q08174 1060 aa21.22■□□□□ 0.99
HOXC8-201ENST00000040584 GRIK2Q13002 908 aa21.22■□□□□ 0.99
HOXC8-201ENST00000040584 TRIM48Q8IWZ4 208 aa21.22■□□□□ 0.99
HOXC8-201ENST00000040584 LILRA2Q8N149 483 aa21.22■□□□□ 0.99
HOXC8-201ENST00000040584 ZNF548Q8NEK5 533 aaPredicted RBP21.22■□□□□ 0.99
HOXC8-201ENST00000040584 ZDHHC1Q8WTX9 485 aa21.22■□□□□ 0.99
HOXC8-201ENST00000040584 NEIL2Q969S2 332 aa21.22■□□□□ 0.99
HOXC8-201ENST00000040584 ZUFSPQ96AP4 578 aa21.22■□□□□ 0.99
HOXC8-201ENST00000040584 SH2B3Q9UQQ2 575 aa21.22■□□□□ 0.99
HOXC8-201ENST00000040584 AP4B1Q9Y6B7 739 aa21.22■□□□□ 0.99
HOXC8-201ENST00000040584 KCNE2Q9Y6J6 123 aa21.22■□□□□ 0.99
HOXC8-201ENST00000040584 COMMD3-BMI1R4GMX3 469 aa21.22■□□□□ 0.99
HOXC8-201ENST00000040584 VPS13AQ96RL7 3174 aa21.21■□□□□ 0.99
HOXC8-201ENST00000040584 TCRBV3S1A0A5B6 114 aa21.21■□□□□ 0.99
HOXC8-201ENST00000040584 ZNF839A8K0R7 811 aa21.21■□□□□ 0.99
HOXC8-201ENST00000040584 B4DGG1 531 aa21.21■□□□□ 0.99
HOXC8-201ENST00000040584 FFAR3O14843 346 aa21.21■□□□□ 0.99
HOXC8-201ENST00000040584 GPR42O15529 346 aa21.21■□□□□ 0.99
HOXC8-201ENST00000040584 AQP9O43315 295 aa21.21■□□□□ 0.99
HOXC8-201ENST00000040584 CHEK2O96017 543 aa21.21■□□□□ 0.99
HOXC8-201ENST00000040584 GPX3P22352 226 aa21.21■□□□□ 0.99
HOXC8-201ENST00000040584 PKLRP30613 574 aa21.21■□□□□ 0.99
HOXC8-201ENST00000040584 CTSKP43235 329 aa21.21■□□□□ 0.99
HOXC8-201ENST00000040584 RPL5P46777 297 aaKnown RBP21.21■□□□□ 0.99
HOXC8-201ENST00000040584 POLE2P56282 527 aa21.21■□□□□ 0.99
HOXC8-201ENST00000040584 CHIT1Q13231 466 aa21.21■□□□□ 0.99
HOXC8-201ENST00000040584 SIM2Q14190 667 aaPredicted RBP21.21■□□□□ 0.99
HOXC8-201ENST00000040584 GGTA1PQ4G0N0 100 aa21.21■□□□□ 0.99
HOXC8-201ENST00000040584 SCIMPQ6UWF3 145 aa21.21■□□□□ 0.99
HOXC8-201ENST00000040584 GKN2Q86XP6 184 aa21.21■□□□□ 0.99
HOXC8-201ENST00000040584 L3MBTL4Q8NA19 623 aa21.21■□□□□ 0.99
HOXC8-201ENST00000040584 SLC37A2Q8TED4 501 aa21.21■□□□□ 0.99
HOXC8-201ENST00000040584 ACAT2Q9BWD1 397 aa21.21■□□□□ 0.99
HOXC8-201ENST00000040584 TRIM15Q9C019 465 aa21.21■□□□□ 0.99
HOXC8-201ENST00000040584 GID8Q9NWU2 228 aa21.21■□□□□ 0.99
HOXC8-201ENST00000040584 CPNE7Q9UBL6 633 aa21.21■□□□□ 0.99
HOXC8-201ENST00000040584 SUSD2Q9UGT4 822 aa21.21■□□□□ 0.99
HOXC8-201ENST00000040584 PADI4Q9UM07 663 aa21.21■□□□□ 0.99
HOXC8-201ENST00000040584 DOLKQ9UPQ8 538 aa21.21■□□□□ 0.99
HOXC8-201ENST00000040584 OR5K4A6NMS3 321 aa21.2■□□□□ 0.98
HOXC8-201ENST00000040584 VIPP01282 170 aa21.2■□□□□ 0.98
HOXC8-201ENST00000040584 MSX2P35548 267 aaPredicted RBP21.2■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms