RNA–Protein interactions for RNA: ENSMUST00000088349.2

Col9a1-202, Transcript of Collagen alpha-1(IX) chain, mousemouse

TSL 1 (best) BASIC

Gene Col9a1, Length 3,059 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col9a1-202ENSMUST00000088349 RbpjlO08674 515 aa11.24□□□□□ -0.61
Col9a1-202ENSMUST00000088349 Ccr7P47774 378 aa11.24□□□□□ -0.61
Col9a1-202ENSMUST00000088349 Slc1a5P51912 553 aa11.24□□□□□ -0.61
Col9a1-202ENSMUST00000088349 Cntn5P68500 1098 aa11.24□□□□□ -0.61
Col9a1-202ENSMUST00000088349 Mmp11Q02853 492 aa11.24□□□□□ -0.61
Col9a1-202ENSMUST00000088349 Mageb5Q14AN0 366 aa11.24□□□□□ -0.61
Col9a1-202ENSMUST00000088349 Adam39Q7M762 756 aa11.24□□□□□ -0.61
Col9a1-202ENSMUST00000088349 NapepldQ8BH82 396 aa11.24□□□□□ -0.61
Col9a1-202ENSMUST00000088349 Fam131aQ8BWU3 361 aa11.24□□□□□ -0.61
Col9a1-202ENSMUST00000088349 Smco1Q8CEZ1 214 aa11.24□□□□□ -0.61
Col9a1-202ENSMUST00000088349 Cnot3Q8K0V4 751 aaKnown RBP11.24□□□□□ -0.61
Col9a1-202ENSMUST00000088349 Ly6g5cQ8K1T5 149 aa11.24□□□□□ -0.61
Col9a1-202ENSMUST00000088349 NrmQ8VC65 262 aa11.24□□□□□ -0.61
Col9a1-202ENSMUST00000088349 Aim2Q91VJ1 354 aaKnown RBP11.24□□□□□ -0.61
Col9a1-202ENSMUST00000088349 Man2c1Q91W89 1039 aa11.24□□□□□ -0.61
Col9a1-202ENSMUST00000088349 Nipal2Q91WC7 383 aa11.24□□□□□ -0.61
Col9a1-202ENSMUST00000088349 Q9DAD0 168 aa11.24□□□□□ -0.61
Col9a1-202ENSMUST00000088349 Tor1aQ9ER39 333 aa11.24□□□□□ -0.61
Col9a1-202ENSMUST00000088349 BC024063A0A1W2P7G7 749 aa11.23□□□□□ -0.61
Col9a1-202ENSMUST00000088349 Fbxo47A2A6H3 451 aa11.23□□□□□ -0.61
Col9a1-202ENSMUST00000088349 Gm3138K7N754 218 aa11.23□□□□□ -0.61
Col9a1-202ENSMUST00000088349 Ptch2O35595 1182 aa11.23□□□□□ -0.61
Col9a1-202ENSMUST00000088349 Cops4O88544 406 aa11.23□□□□□ -0.61
Col9a1-202ENSMUST00000088349 Slc16a1P53986 493 aa11.23□□□□□ -0.61
Col9a1-202ENSMUST00000088349 Neurog1P70660 244 aa11.23□□□□□ -0.61
Col9a1-202ENSMUST00000088349 Samd12Q0VE29 161 aa11.23□□□□□ -0.61
Col9a1-202ENSMUST00000088349 Aldh16a1Q571I9 802 aa11.23□□□□□ -0.61
Col9a1-202ENSMUST00000088349 RasefQ5RI75 627 aa11.23□□□□□ -0.61
Col9a1-202ENSMUST00000088349 Kpna1Q60960 538 aa11.23□□□□□ -0.61
Col9a1-202ENSMUST00000088349 Cd6Q61003 665 aa11.23□□□□□ -0.61
Col9a1-202ENSMUST00000088349 Bcl2l1Q64373 233 aa11.23□□□□□ -0.61
Col9a1-202ENSMUST00000088349 Galnt2Q6PB93 570 aa11.23□□□□□ -0.61
Col9a1-202ENSMUST00000088349 Zfyve1Q810J8 777 aa11.23□□□□□ -0.61
Col9a1-202ENSMUST00000088349 Krr1Q8BGA5 380 aaKnown RBP11.23□□□□□ -0.61
Col9a1-202ENSMUST00000088349 Reep1Q8BGH4 201 aa11.23□□□□□ -0.61
Col9a1-202ENSMUST00000088349 Clec9aQ8BRU4 238 aa11.23□□□□□ -0.61
Col9a1-202ENSMUST00000088349 Samd3Q8C4H2 520 aa11.23□□□□□ -0.61
Col9a1-202ENSMUST00000088349 Wdr47Q8CGF6 920 aa11.23□□□□□ -0.61
Col9a1-202ENSMUST00000088349 Slc35b4Q8CIA5 331 aa11.23□□□□□ -0.61
Col9a1-202ENSMUST00000088349 Vmn1r188Q8K3N2 308 aa11.23□□□□□ -0.61
Col9a1-202ENSMUST00000088349 SarafQ8R3Q0 334 aa11.23□□□□□ -0.61
Col9a1-202ENSMUST00000088349 Mthfd1Q922D8 935 aa11.23□□□□□ -0.61
Col9a1-202ENSMUST00000088349 Uqcc2Q9CQY6 136 aa11.23□□□□□ -0.61
Col9a1-202ENSMUST00000088349 Arpc5lQ9D898 153 aa11.23□□□□□ -0.61
Col9a1-202ENSMUST00000088349 EefsecQ9JHW4 583 aa11.23□□□□□ -0.61
Col9a1-202ENSMUST00000088349 Stau1Q9Z108 487 aaKnown RBP11.23□□□□□ -0.61
Col9a1-202ENSMUST00000088349 Gm5565A0A0G2JGB2 317 aa11.23□□□□□ -0.61
Col9a1-202ENSMUST00000088349 Sult2a7A0A1B0GRF0 313 aa11.23□□□□□ -0.61
Col9a1-202ENSMUST00000088349 PfklP12382 780 aa11.23□□□□□ -0.61
Col9a1-202ENSMUST00000088349 SrgnP13609 152 aa11.23□□□□□ -0.61
Col9a1-202ENSMUST00000088349 Mkl2P59759 1080 aa11.23□□□□□ -0.61
Col9a1-202ENSMUST00000088349 Gjb5Q02739 271 aa11.23□□□□□ -0.61
Col9a1-202ENSMUST00000088349 Eef2kmtQ3UZW7 335 aa11.23□□□□□ -0.61
Col9a1-202ENSMUST00000088349 Trim36Q80WG7 729 aa11.23□□□□□ -0.61
Col9a1-202ENSMUST00000088349 Smad3Q8BUN5 425 aa11.23□□□□□ -0.61
Col9a1-202ENSMUST00000088349 Glcci1Q8K3I9 537 aa11.23□□□□□ -0.61
Col9a1-202ENSMUST00000088349 Utp4Q8R2N2 686 aaKnown RBP11.23□□□□□ -0.61
Col9a1-202ENSMUST00000088349 Tmem30aQ8VEK0 364 aa11.23□□□□□ -0.61
Col9a1-202ENSMUST00000088349 Olfr1263Q8VG63 306 aa11.23□□□□□ -0.61
Col9a1-202ENSMUST00000088349 Acsm1Q91VA0 573 aa11.23□□□□□ -0.61
Col9a1-202ENSMUST00000088349 St3gal4Q91Y74 333 aa11.23□□□□□ -0.61
Col9a1-202ENSMUST00000088349 L2hgdhQ91YP0 464 aa11.23□□□□□ -0.61
Col9a1-202ENSMUST00000088349 Scpep1Q920A5 452 aa11.23□□□□□ -0.61
Col9a1-202ENSMUST00000088349 Slc8b1Q925Q3 585 aa11.23□□□□□ -0.61
Col9a1-202ENSMUST00000088349 NgrnQ99KS2 293 aaKnown RBP11.23□□□□□ -0.61
Col9a1-202ENSMUST00000088349 Zdhhc21Q9D270 265 aa11.23□□□□□ -0.61
Col9a1-202ENSMUST00000088349 Ern1Q9EQY0 977 aa11.23□□□□□ -0.61
Col9a1-202ENSMUST00000088349 Scn5aQ9JJV9 2019 aa11.23□□□□□ -0.61
Col9a1-202ENSMUST00000088349 Cd300ld2A2A7W0 305 aa11.22□□□□□ -0.61
Col9a1-202ENSMUST00000088349 Vmn2r118E9Q1C1 853 aa11.22□□□□□ -0.61
Col9a1-202ENSMUST00000088349 Shisa8J3QNX5 399 aa11.22□□□□□ -0.61
Col9a1-202ENSMUST00000088349 Gm3248K7N721 186 aa11.22□□□□□ -0.61
Col9a1-202ENSMUST00000088349 Gm3488M0QW81 238 aa11.22□□□□□ -0.61
Col9a1-202ENSMUST00000088349 Cyp1a1P00184 524 aa11.22□□□□□ -0.61
Col9a1-202ENSMUST00000088349 Pcsk2P21661 637 aa11.22□□□□□ -0.61
Col9a1-202ENSMUST00000088349 FpgsP48760 587 aa11.22□□□□□ -0.61
Col9a1-202ENSMUST00000088349 Entpd1P55772 510 aa11.22□□□□□ -0.61
Col9a1-202ENSMUST00000088349 GaltQ03249 379 aa11.22□□□□□ -0.61
Col9a1-202ENSMUST00000088349 Nfatc2Q60591 927 aa11.22□□□□□ -0.61
Col9a1-202ENSMUST00000088349 Slc39a10Q6P5F6 833 aa11.22□□□□□ -0.61
Col9a1-202ENSMUST00000088349 Olfr1197Q7TR13 314 aa11.22□□□□□ -0.61
Col9a1-202ENSMUST00000088349 Olfr1196Q7TR14 314 aa11.22□□□□□ -0.61
Col9a1-202ENSMUST00000088349 Ubp1Q811S7 540 aa11.22□□□□□ -0.61
Col9a1-202ENSMUST00000088349 Ctdsp2Q8BX07 270 aa11.22□□□□□ -0.61
Col9a1-202ENSMUST00000088349 Abhd18Q8C1A9 464 aa11.22□□□□□ -0.61
Col9a1-202ENSMUST00000088349 SynpoQ8CC35 929 aaKnown RBP11.22□□□□□ -0.61
Col9a1-202ENSMUST00000088349 Cadm1Q8R5M8 456 aaKnown RBP11.22□□□□□ -0.61
Col9a1-202ENSMUST00000088349 Elp2Q91WG4 831 aaKnown RBP11.22□□□□□ -0.61
Col9a1-202ENSMUST00000088349 NtpcrQ9CQA9 190 aaKnown RBP11.22□□□□□ -0.61
Col9a1-202ENSMUST00000088349 Serpinb1aQ9D154 379 aa11.22□□□□□ -0.61
Col9a1-202ENSMUST00000088349 Plpp6Q9D4F2 292 aa11.22□□□□□ -0.61
Col9a1-202ENSMUST00000088349 Rnase10Q9D5A9 208 aa11.22□□□□□ -0.61
Col9a1-202ENSMUST00000088349 Smim23Q9DAL0 136 aa11.22□□□□□ -0.61
Col9a1-202ENSMUST00000088349 Xylt2Q9EPL0 865 aa11.22□□□□□ -0.61
Col9a1-202ENSMUST00000088349 GraspQ9JJA9 392 aa11.22□□□□□ -0.61
Col9a1-202ENSMUST00000088349 Wdfy3Q6VNB8 3508 aa11.22□□□□□ -0.61
Col9a1-202ENSMUST00000088349 Brca2P97929 3329 aa11.22□□□□□ -0.61
Col9a1-202ENSMUST00000088349 Tmem236A2ARJ3 344 aa11.22□□□□□ -0.61
Col9a1-202ENSMUST00000088349 Vmn2r3H3BJ88 915 aa11.22□□□□□ -0.61
Col9a1-202ENSMUST00000088349 E030030I06RikJ3QML9 246 aa11.22□□□□□ -0.61
Retrieved 100 of 22,080 RNA–protein pairs in 27.9 ms