RNA–Protein interactions for RNA: ENSMUST00000020911.13

Sdc1-201, Transcript of Syndecan-1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Sdc1, Length 3,157 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc1-201ENSMUST00000020911 Pth2rQ91V95 546 aa11.2□□□□□ -0.62
Sdc1-201ENSMUST00000020911 Smim14Q91VT8 99 aa11.2□□□□□ -0.62
Sdc1-201ENSMUST00000020911 Med6Q921D4 246 aaKnown RBP11.2□□□□□ -0.62
Sdc1-201ENSMUST00000020911 Ints11Q9CWS4 600 aa11.2□□□□□ -0.62
Sdc1-201ENSMUST00000020911 Scamp5Q9JKD3 235 aa11.2□□□□□ -0.62
Sdc1-201ENSMUST00000020911 H2afyQ9QZQ8 372 aaKnown RBP11.2□□□□□ -0.62
Sdc1-201ENSMUST00000020911 ClcnkaQ9WUB7 687 aa11.2□□□□□ -0.62
Sdc1-201ENSMUST00000020911 1700025B11RikA0A087WNZ6 93 aa11.2□□□□□ -0.62
Sdc1-201ENSMUST00000020911 Dhx35A2ACQ1 703 aaKnown RBP11.2□□□□□ -0.62
Sdc1-201ENSMUST00000020911 Gm6592A2AHC7 168 aa11.2□□□□□ -0.62
Sdc1-201ENSMUST00000020911 Fpr-rs4A4FUQ5 323 aa11.2□□□□□ -0.62
Sdc1-201ENSMUST00000020911 Gm43720E0CXM8 267 aa11.2□□□□□ -0.62
Sdc1-201ENSMUST00000020911 TpteG5E8H5 664 aa11.2□□□□□ -0.62
Sdc1-201ENSMUST00000020911 Gm3336J3QMQ6 198 aa11.2□□□□□ -0.62
Sdc1-201ENSMUST00000020911 Gstm6O35660 218 aa11.2□□□□□ -0.62
Sdc1-201ENSMUST00000020911 Cldn5O54942 218 aa11.2□□□□□ -0.62
Sdc1-201ENSMUST00000020911 AldoaP05064 364 aaKnown RBP11.2□□□□□ -0.62
Sdc1-201ENSMUST00000020911 Tm9sf2P58021 662 aa11.2□□□□□ -0.62
Sdc1-201ENSMUST00000020911 Ufd1P70362 307 aa11.2□□□□□ -0.62
Sdc1-201ENSMUST00000020911 PrkczQ02956 592 aa11.2□□□□□ -0.62
Sdc1-201ENSMUST00000020911 RnaselQ05921 735 aa11.2□□□□□ -0.62
Sdc1-201ENSMUST00000020911 1700057G04RikQ3V0U0 232 aa11.2□□□□□ -0.62
Sdc1-201ENSMUST00000020911 GstcdQ5RL51 634 aa11.2□□□□□ -0.62
Sdc1-201ENSMUST00000020911 Cd300aQ6SJQ0 318 aa11.2□□□□□ -0.62
Sdc1-201ENSMUST00000020911 Xylt1Q811B1 953 aa11.2□□□□□ -0.62
Sdc1-201ENSMUST00000020911 Trim23Q8BGX0 574 aa11.2□□□□□ -0.62
Sdc1-201ENSMUST00000020911 Acp6Q8BP40 418 aa11.2□□□□□ -0.62
Sdc1-201ENSMUST00000020911 Pak5Q8C015 719 aa11.2□□□□□ -0.62
Sdc1-201ENSMUST00000020911 Foxe1Q8R2I0 371 aa11.2□□□□□ -0.62
Sdc1-201ENSMUST00000020911 Chrna3Q8R4G9 499 aa11.2□□□□□ -0.62
Sdc1-201ENSMUST00000020911 MrgpreQ91ZB7 310 aa11.2□□□□□ -0.62
Sdc1-201ENSMUST00000020911 Mrto4Q9D0I8 239 aaKnown RBP11.2□□□□□ -0.62
Sdc1-201ENSMUST00000020911 Ank3G5E8K5 1961 aa11.2□□□□□ -0.62
Sdc1-201ENSMUST00000020911 Olfr419E9Q0Y7 313 aa11.2□□□□□ -0.62
Sdc1-201ENSMUST00000020911 2610008E11RikG3X964 669 aa11.2□□□□□ -0.62
Sdc1-201ENSMUST00000020911 Stx7O70439 261 aa11.2□□□□□ -0.62
Sdc1-201ENSMUST00000020911 Bard1O70445 765 aa11.2□□□□□ -0.62
Sdc1-201ENSMUST00000020911 Il2P04351 169 aa11.2□□□□□ -0.62
Sdc1-201ENSMUST00000020911 RrasP10833 218 aa11.2□□□□□ -0.62
Sdc1-201ENSMUST00000020911 Ptger1P35375 405 aa11.2□□□□□ -0.62
Sdc1-201ENSMUST00000020911 CtskP55097 329 aa11.2□□□□□ -0.62
Sdc1-201ENSMUST00000020911 TankP70347 448 aa11.2□□□□□ -0.62
Sdc1-201ENSMUST00000020911 Usp39Q3TIX9 564 aa11.2□□□□□ -0.62
Sdc1-201ENSMUST00000020911 Fzd7Q61090 572 aa11.2□□□□□ -0.62
Sdc1-201ENSMUST00000020911 Znf235Q61116 645 aa11.2□□□□□ -0.62
Sdc1-201ENSMUST00000020911 Sema3cQ62181 751 aa11.2□□□□□ -0.62
Sdc1-201ENSMUST00000020911 Lingo3Q6GQU6 589 aa11.2□□□□□ -0.62
Sdc1-201ENSMUST00000020911 RinlQ80UW3 563 aa11.2□□□□□ -0.62
Sdc1-201ENSMUST00000020911 Il17reQ8BH06 637 aa11.2□□□□□ -0.62
Sdc1-201ENSMUST00000020911 Zbtb37Q8C3U9 504 aa11.2□□□□□ -0.62
Sdc1-201ENSMUST00000020911 Adgrg3Q8R0T6 542 aa11.2□□□□□ -0.62
Sdc1-201ENSMUST00000020911 Vmn1r203Q8R273 311 aa11.2□□□□□ -0.62
Sdc1-201ENSMUST00000020911 Olfr352Q8VGJ9 315 aa11.2□□□□□ -0.62
Sdc1-201ENSMUST00000020911 Msi2Q920Q6 346 aaKnown RBP11.2□□□□□ -0.62
Sdc1-201ENSMUST00000020911 Cep41Q99NF3 373 aa11.2□□□□□ -0.62
Sdc1-201ENSMUST00000020911 Mrpl54Q9CPW3 135 aa11.2□□□□□ -0.62
Sdc1-201ENSMUST00000020911 Tsga13Q9DA17 273 aa11.2□□□□□ -0.62
Sdc1-201ENSMUST00000020911 Lrrc46Q9DAP0 323 aa11.2□□□□□ -0.62
Sdc1-201ENSMUST00000020911 Bloc1s6Q9R0C0 172 aa11.2□□□□□ -0.62
Sdc1-201ENSMUST00000020911 Rgs6Q9Z2H2 472 aa11.2□□□□□ -0.62
Sdc1-201ENSMUST00000020911 Fam136b-psA0A140T8T1 138 aa11.19□□□□□ -0.62
Sdc1-201ENSMUST00000020911 Gm5485A0A1D5RM98 91 aa11.19□□□□□ -0.62
Sdc1-201ENSMUST00000020911 Pate3B3GLJ3 98 aa11.19□□□□□ -0.62
Sdc1-201ENSMUST00000020911 Gm8369E9PZI3 166 aa11.19□□□□□ -0.62
Sdc1-201ENSMUST00000020911 Zfp384E9Q1A5 584 aaKnown RBP11.19□□□□□ -0.62
Sdc1-201ENSMUST00000020911 Ercc2O08811 760 aaKnown RBP11.19□□□□□ -0.62
Sdc1-201ENSMUST00000020911 Atn1O35126 1175 aa11.19□□□□□ -0.62
Sdc1-201ENSMUST00000020911 JtbO88824 146 aa11.19□□□□□ -0.62
Sdc1-201ENSMUST00000020911 Fth1P09528 182 aa11.19□□□□□ -0.62
Sdc1-201ENSMUST00000020911 GalP47212 124 aa11.19□□□□□ -0.62
Sdc1-201ENSMUST00000020911 GipP48756 144 aa11.19□□□□□ -0.62
Sdc1-201ENSMUST00000020911 MylpfP97457 169 aa11.19□□□□□ -0.62
Sdc1-201ENSMUST00000020911 Smpd1Q04519 627 aa11.19□□□□□ -0.62
Sdc1-201ENSMUST00000020911 Sppl2bQ3TD49 578 aa11.19□□□□□ -0.62
Sdc1-201ENSMUST00000020911 Trafd1Q3UDK1 580 aa11.19□□□□□ -0.62
Sdc1-201ENSMUST00000020911 Abcd2Q61285 741 aa11.19□□□□□ -0.62
Sdc1-201ENSMUST00000020911 Creb3Q61817 404 aa11.19□□□□□ -0.62
Sdc1-201ENSMUST00000020911 Gpr119Q7TQP3 335 aa11.19□□□□□ -0.62
Sdc1-201ENSMUST00000020911 F12Q80YC5 597 aa11.19□□□□□ -0.62
Sdc1-201ENSMUST00000020911 Slc6a17Q8BJI1 727 aa11.19□□□□□ -0.62
Sdc1-201ENSMUST00000020911 Ttc24Q8BYG0 334 aa11.19□□□□□ -0.62
Sdc1-201ENSMUST00000020911 Gpr157Q8C206 330 aa11.19□□□□□ -0.62
Sdc1-201ENSMUST00000020911 Olfr77Q8VEY9 312 aa11.19□□□□□ -0.62
Sdc1-201ENSMUST00000020911 Spred1Q924S8 444 aa11.19□□□□□ -0.62
Sdc1-201ENSMUST00000020911 Mrps24Q9CQV5 167 aa11.19□□□□□ -0.62
Sdc1-201ENSMUST00000020911 VasnQ9CZT5 673 aa11.19□□□□□ -0.62
Sdc1-201ENSMUST00000020911 Eef1akmt2Q9D853 244 aa11.19□□□□□ -0.62
Sdc1-201ENSMUST00000020911 Actr6Q9D864 396 aa11.19□□□□□ -0.62
Sdc1-201ENSMUST00000020911 Pgam1Q9DBJ1 254 aa11.19□□□□□ -0.62
Sdc1-201ENSMUST00000020911 Olfr711Q9EPG2 314 aa11.19□□□□□ -0.62
Sdc1-201ENSMUST00000020911 BlnkQ9QUN3 457 aa11.19□□□□□ -0.62
Sdc1-201ENSMUST00000020911 Nme4Q9WV84 186 aa11.19□□□□□ -0.62
Sdc1-201ENSMUST00000020911 Gm45713A0A1B0GS68 446 aa11.19□□□□□ -0.62
Sdc1-201ENSMUST00000020911 NfkbieO54910 364 aa11.19□□□□□ -0.62
Sdc1-201ENSMUST00000020911 Fkbp7O54998 218 aa11.19□□□□□ -0.62
Sdc1-201ENSMUST00000020911 Mkln1O89050 735 aa11.19□□□□□ -0.62
Sdc1-201ENSMUST00000020911 NelfeP19426 375 aa11.19□□□□□ -0.62
Sdc1-201ENSMUST00000020911 Syt4P40749 425 aa11.19□□□□□ -0.62
Sdc1-201ENSMUST00000020911 StsP50427 624 aa11.19□□□□□ -0.62
Sdc1-201ENSMUST00000020911 Hoxb13P70321 286 aa11.19□□□□□ -0.62
Retrieved 100 of 22,080 RNA–protein pairs in 23.4 ms