RNA–Protein interactions for RNA: ENSMUST00000004430.13

Clcn3-201, Transcript of H(+)/Cl(-) exchange transporter 3, mousemouse

APPRIS ALT1 TSL 1 (best) BASIC

Gene Clcn3, Length 4,175 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn3-201ENSMUST00000004430 Rpl7a-ps3A0A140T8L1 270 aa12.41□□□□□ -0.42
Clcn3-201ENSMUST00000004430 Fam43bA2AM80 330 aa12.41□□□□□ -0.42
Clcn3-201ENSMUST00000004430 Vmn2r22E9Q7S8 853 aa12.41□□□□□ -0.42
Clcn3-201ENSMUST00000004430 Usp2O88623 613 aa12.41□□□□□ -0.42
Clcn3-201ENSMUST00000004430 Kcnj12P52187 427 aa12.41□□□□□ -0.42
Clcn3-201ENSMUST00000004430 Pdx1P52946 284 aa12.41□□□□□ -0.42
Clcn3-201ENSMUST00000004430 Arpc4P59999 168 aaKnown RBP12.41□□□□□ -0.42
Clcn3-201ENSMUST00000004430 Ccbe1Q3MI99 408 aa12.41□□□□□ -0.42
Clcn3-201ENSMUST00000004430 CenplQ3U3S3 329 aa12.41□□□□□ -0.42
Clcn3-201ENSMUST00000004430 A630001G21RikQ3UTB2 229 aa12.41□□□□□ -0.42
Clcn3-201ENSMUST00000004430 Il15raQ60819 263 aa12.41□□□□□ -0.42
Clcn3-201ENSMUST00000004430 ToxQ66JW3 526 aa12.41□□□□□ -0.42
Clcn3-201ENSMUST00000004430 Osgepl1Q6PEB4 414 aa12.41□□□□□ -0.42
Clcn3-201ENSMUST00000004430 Kirrel1Q80W68 789 aa12.41□□□□□ -0.42
Clcn3-201ENSMUST00000004430 Steap2Q8BWB6 489 aa12.41□□□□□ -0.42
Clcn3-201ENSMUST00000004430 PxkQ8BX57 582 aa12.41□□□□□ -0.42
Clcn3-201ENSMUST00000004430 Znf322Q8BZ89 410 aa12.41□□□□□ -0.42
Clcn3-201ENSMUST00000004430 Tmsb15lQ8C0W0 80 aa12.41□□□□□ -0.42
Clcn3-201ENSMUST00000004430 Tmem135Q9CYV5 458 aa12.41□□□□□ -0.42
Clcn3-201ENSMUST00000004430 Tyk2Q9R117 1184 aa12.41□□□□□ -0.42
Clcn3-201ENSMUST00000004430 Myo7aP97479 2215 aa12.41□□□□□ -0.42
Clcn3-201ENSMUST00000004430 Ism2D3Z6A3 493 aa12.4□□□□□ -0.42
Clcn3-201ENSMUST00000004430 2610021A01RikE9Q0Q3 834 aa12.4□□□□□ -0.42
Clcn3-201ENSMUST00000004430 Tex16F6WNY1 1150 aa12.4□□□□□ -0.42
Clcn3-201ENSMUST00000004430 Vmn1r25H3BLP0 302 aa12.4□□□□□ -0.42
Clcn3-201ENSMUST00000004430 Phox2bO35690 314 aa12.4□□□□□ -0.42
Clcn3-201ENSMUST00000004430 Dsc3P55850 896 aa12.4□□□□□ -0.42
Clcn3-201ENSMUST00000004430 Gm45902Q3UDN3 361 aa12.4□□□□□ -0.42
Clcn3-201ENSMUST00000004430 CilpQ66K08 1184 aa12.4□□□□□ -0.42
Clcn3-201ENSMUST00000004430 Tspan18Q80WR1 248 aa12.4□□□□□ -0.42
Clcn3-201ENSMUST00000004430 Nrde2Q80XC6 1172 aa12.4□□□□□ -0.42
Clcn3-201ENSMUST00000004430 Cyth4Q80YW0 393 aa12.4□□□□□ -0.42
Clcn3-201ENSMUST00000004430 Gper1Q8BMP4 375 aa12.4□□□□□ -0.42
Clcn3-201ENSMUST00000004430 Clec4a3Q8JZX6 237 aa12.4□□□□□ -0.42
Clcn3-201ENSMUST00000004430 Olfr1302Q8VGE9 315 aa12.4□□□□□ -0.42
Clcn3-201ENSMUST00000004430 Olfr586Q8VH13 317 aa12.4□□□□□ -0.42
Clcn3-201ENSMUST00000004430 Marc1Q9CW42 340 aa12.4□□□□□ -0.42
Clcn3-201ENSMUST00000004430 Cyb5r1Q9DB73 305 aa12.4□□□□□ -0.42
Clcn3-201ENSMUST00000004430 FarsbQ9WUA2 589 aaKnown RBP12.4□□□□□ -0.42
Clcn3-201ENSMUST00000004430 Cd320Q9Z1P5 260 aa12.4□□□□□ -0.42
Clcn3-201ENSMUST00000004430 Slc43a3A2AVZ9 502 aa12.4□□□□□ -0.42
Clcn3-201ENSMUST00000004430 Gm4450E9Q007 373 aa12.4□□□□□ -0.42
Clcn3-201ENSMUST00000004430 Cyp8b1O88962 500 aa12.4□□□□□ -0.42
Clcn3-201ENSMUST00000004430 StacP97306 403 aa12.4□□□□□ -0.42
Clcn3-201ENSMUST00000004430 Tigd2Q0VBL1 525 aa12.4□□□□□ -0.42
Clcn3-201ENSMUST00000004430 Gpat2Q14DK4 801 aa12.4□□□□□ -0.42
Clcn3-201ENSMUST00000004430 HecaQ3V1N5 544 aaKnown RBP12.4□□□□□ -0.42
Clcn3-201ENSMUST00000004430 Hsd3b4Q61767 373 aa12.4□□□□□ -0.42
Clcn3-201ENSMUST00000004430 Slain1Q68FF7 579 aa12.4□□□□□ -0.42
Clcn3-201ENSMUST00000004430 PapolgQ6PCL9 739 aa12.4□□□□□ -0.42
Clcn3-201ENSMUST00000004430 Oog2Q7TPX8 476 aa12.4□□□□□ -0.42
Clcn3-201ENSMUST00000004430 DglucyQ8BH86 617 aa12.4□□□□□ -0.42
Clcn3-201ENSMUST00000004430 Tspan9Q8BJU2 239 aa12.4□□□□□ -0.42
Clcn3-201ENSMUST00000004430 MaobQ8BW75 520 aa12.4□□□□□ -0.42
Clcn3-201ENSMUST00000004430 Q8BWQ6 963 aa12.4□□□□□ -0.42
Clcn3-201ENSMUST00000004430 Samd3Q8C4H2 520 aa12.4□□□□□ -0.42
Clcn3-201ENSMUST00000004430 Pih1d2Q8CHR9 315 aa12.4□□□□□ -0.42
Clcn3-201ENSMUST00000004430 CcsapQ8QZT2 252 aa12.4□□□□□ -0.42
Clcn3-201ENSMUST00000004430 Vmn1r6Q8R2D4 303 aa12.4□□□□□ -0.42
Clcn3-201ENSMUST00000004430 Tmcc3Q8R310 477 aa12.4□□□□□ -0.42
Clcn3-201ENSMUST00000004430 Kctd5Q8VC57 234 aa12.4□□□□□ -0.42
Clcn3-201ENSMUST00000004430 Q9CQF4 240 aa12.4□□□□□ -0.42
Clcn3-201ENSMUST00000004430 Prl7c1Q9CRB5 251 aa12.4□□□□□ -0.42
Clcn3-201ENSMUST00000004430 Lrrc69Q9D9Q0 347 aa12.4□□□□□ -0.42
Clcn3-201ENSMUST00000004430 BC035947B2RQY6 695 aa12.4□□□□□ -0.42
Clcn3-201ENSMUST00000004430 Gm6569D3YTM9 175 aa12.4□□□□□ -0.42
Clcn3-201ENSMUST00000004430 PdynO35417 248 aa12.4□□□□□ -0.42
Clcn3-201ENSMUST00000004430 Il11ra2P70225 432 aa12.4□□□□□ -0.42
Clcn3-201ENSMUST00000004430 Bmp1P98063 991 aa12.4□□□□□ -0.42
Clcn3-201ENSMUST00000004430 Fads2p1Q0VAX3 487 aa12.4□□□□□ -0.42
Clcn3-201ENSMUST00000004430 DtlQ3TLR7 729 aa12.4□□□□□ -0.42
Clcn3-201ENSMUST00000004430 SbplQ3TUY3 232 aa12.4□□□□□ -0.42
Clcn3-201ENSMUST00000004430 Smu1Q3UKJ7 513 aaKnown RBP12.4□□□□□ -0.42
Clcn3-201ENSMUST00000004430 Mansc4Q3UU94 337 aa12.4□□□□□ -0.42
Clcn3-201ENSMUST00000004430 Spin1Q61142 262 aa12.4□□□□□ -0.42
Clcn3-201ENSMUST00000004430 Jak3Q62137 1100 aa12.4□□□□□ -0.42
Clcn3-201ENSMUST00000004430 Olfr1308Q7TQX0 320 aa12.4□□□□□ -0.42
Clcn3-201ENSMUST00000004430 Cdkn3Q810P3 211 aa12.4□□□□□ -0.42
Clcn3-201ENSMUST00000004430 Zfp57Q8C6P8 421 aa12.4□□□□□ -0.42
Clcn3-201ENSMUST00000004430 Gpn2Q8VEJ1 310 aa12.4□□□□□ -0.42
Clcn3-201ENSMUST00000004430 Polr2aP08775 1970 aaKnown RBP12.4□□□□□ -0.42
Clcn3-201ENSMUST00000004430 Pate3B3GLJ3 98 aa12.4□□□□□ -0.43
Clcn3-201ENSMUST00000004430 Gm8906L7N2A2 181 aa12.4□□□□□ -0.43
Clcn3-201ENSMUST00000004430 Reps1O54916 795 aa12.4□□□□□ -0.43
Clcn3-201ENSMUST00000004430 ItgamP05555 1153 aa12.4□□□□□ -0.43
Clcn3-201ENSMUST00000004430 Gon7P0C8B4 98 aa12.4□□□□□ -0.43
Clcn3-201ENSMUST00000004430 H2-D1P14427 368 aa12.4□□□□□ -0.43
Clcn3-201ENSMUST00000004430 Etv4P28322 485 aa12.4□□□□□ -0.43
Clcn3-201ENSMUST00000004430 Cct3P80318 545 aaKnown RBP12.4□□□□□ -0.43
Clcn3-201ENSMUST00000004430 Usp30Q3UN04 517 aa12.4□□□□□ -0.43
Clcn3-201ENSMUST00000004430 Kbtbd8Q3UQV5 599 aa12.4□□□□□ -0.43
Clcn3-201ENSMUST00000004430 Uimc1Q5U5Q9 727 aa12.4□□□□□ -0.43
Clcn3-201ENSMUST00000004430 Cdkn2cQ60772 168 aa12.4□□□□□ -0.43
Clcn3-201ENSMUST00000004430 Phf21aQ6ZPK0 659 aa12.4□□□□□ -0.43
Clcn3-201ENSMUST00000004430 Aoc1Q8JZQ5 751 aa12.4□□□□□ -0.43
Clcn3-201ENSMUST00000004430 Slc45a3Q8K0H7 553 aa12.4□□□□□ -0.43
Clcn3-201ENSMUST00000004430 Olfr729Q8VET4 323 aa12.4□□□□□ -0.43
Clcn3-201ENSMUST00000004430 Olfr1461Q8VEV7 312 aa12.4□□□□□ -0.43
Clcn3-201ENSMUST00000004430 Retreg3Q9CQV4 466 aa12.4□□□□□ -0.43
Clcn3-201ENSMUST00000004430 Cmtm6Q9CZ69 183 aa12.4□□□□□ -0.43
Retrieved 100 of 22,080 RNA–protein pairs in 50.1 ms