RNA–Protein interactions for RNA: ENST00000641597.1

PHGDH-223, Transcript of phosphoglycerate dehydrogenase, humanhuman

APPRIS P1 BASIC

Gene PHGDH, Length 2,585 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-223ENST00000641597 FADS2O95864 444 aaKnown RBP16.28■□□□□ 0.2
PHGDH-223ENST00000641597 CBSLP0DN79 551 aa16.28■□□□□ 0.2
PHGDH-223ENST00000641597 PRPS2P11908 318 aa16.28■□□□□ 0.2
PHGDH-223ENST00000641597 CBSP35520 551 aa16.28■□□□□ 0.2
PHGDH-223ENST00000641597 MAGEA2P43356 314 aa16.28■□□□□ 0.2
PHGDH-223ENST00000641597 MAPK8P45983 427 aa16.28■□□□□ 0.2
PHGDH-223ENST00000641597 METAP1P53582 386 aa16.28■□□□□ 0.2
PHGDH-223ENST00000641597 VBP1P61758 197 aa16.28■□□□□ 0.2
PHGDH-223ENST00000641597 IER5LQ5T953 404 aa16.28■□□□□ 0.2
PHGDH-223ENST00000641597 ZNF852Q6ZMS4 543 aa16.28■□□□□ 0.2
PHGDH-223ENST00000641597 RPL3LQ92901 407 aaKnown RBP16.28■□□□□ 0.2
PHGDH-223ENST00000641597 NRTNQ99748 197 aa16.28■□□□□ 0.2
PHGDH-223ENST00000641597 AMBNQ9NP70 447 aa16.28■□□□□ 0.2
PHGDH-223ENST00000641597 IL1RAPQ9NPH3 570 aa16.28■□□□□ 0.2
PHGDH-223ENST00000641597 TMEM9Q9P0T7 183 aa16.28■□□□□ 0.2
PHGDH-223ENST00000641597 SH2B3Q9UQQ2 575 aa16.28■□□□□ 0.2
PHGDH-223ENST00000641597 HS3ST2Q9Y278 367 aa16.28■□□□□ 0.2
PHGDH-223ENST00000641597 SAMHD1Q9Y3Z3 626 aaKnown RBP16.28■□□□□ 0.2
PHGDH-223ENST00000641597 DENND4CQ5VZ89 1909 aa16.27■□□□□ 0.2
PHGDH-223ENST00000641597 TTC34A8MYJ7 566 aa16.27■□□□□ 0.2
PHGDH-223ENST00000641597 KDELR2P33947 212 aa16.27■□□□□ 0.2
PHGDH-223ENST00000641597 DUOXA1Q1HG43 343 aa16.27■□□□□ 0.2
PHGDH-223ENST00000641597 ADPRMQ3LIE5 342 aa16.27■□□□□ 0.2
PHGDH-223ENST00000641597 THOC6Q86W42 341 aaKnown RBP16.27■□□□□ 0.2
PHGDH-223ENST00000641597 CROCCP3Q8IVE0 287 aa16.27■□□□□ 0.2
PHGDH-223ENST00000641597 CENPSQ8N2Z9 138 aa16.27■□□□□ 0.2
PHGDH-223ENST00000641597 C1orf52Q8N6N3 182 aaKnown RBP16.27■□□□□ 0.2
PHGDH-223ENST00000641597 NELL1Q92832 810 aa16.27■□□□□ 0.2
PHGDH-223ENST00000641597 RDH12Q96NR8 316 aa16.27■□□□□ 0.2
PHGDH-223ENST00000641597 HHIPQ96QV1 700 aa16.27■□□□□ 0.2
PHGDH-223ENST00000641597 MAGIXQ9H6Y5 334 aa16.27■□□□□ 0.2
PHGDH-223ENST00000641597 PCDHGA10Q9Y5H3 936 aa16.27■□□□□ 0.2
PHGDH-223ENST00000641597 SNX5Q9Y5X3 404 aa16.27■□□□□ 0.2
PHGDH-223ENST00000641597 SZT2Q5T011 3432 aa16.27■□□□□ 0.19
PHGDH-223ENST00000641597 GABRR3A8MPY1 467 aa16.27■□□□□ 0.19
PHGDH-223ENST00000641597 EVPLLA8MZ36 301 aa16.27■□□□□ 0.19
PHGDH-223ENST00000641597 NDUFS2O75306 463 aa16.27■□□□□ 0.19
PHGDH-223ENST00000641597 LEFTY1O75610 366 aa16.27■□□□□ 0.19
PHGDH-223ENST00000641597 CCNDBP1O95273 360 aa16.27■□□□□ 0.19
PHGDH-223ENST00000641597 SLC16A8O95907 504 aa16.27■□□□□ 0.19
PHGDH-223ENST00000641597 C8GP07360 202 aa16.27■□□□□ 0.19
PHGDH-223ENST00000641597 CD300CQ08708 224 aa16.27■□□□□ 0.19
PHGDH-223ENST00000641597 NPTX1Q15818 432 aa16.27■□□□□ 0.19
PHGDH-223ENST00000641597 MOGQ16653 247 aa16.27■□□□□ 0.19
PHGDH-223ENST00000641597 DDX59Q5T1V6 619 aaKnown RBP eCLIP16.27■□□□□ 0.19
PHGDH-223ENST00000641597 TMEM236Q5W0B7 351 aa16.27■□□□□ 0.19
PHGDH-223ENST00000641597 DCDC5Q6ZRR9 648 aa16.27■□□□□ 0.19
PHGDH-223ENST00000641597 RNF165Q6ZSG1 346 aa16.27■□□□□ 0.19
PHGDH-223ENST00000641597 IGFN1Q86VF2 1251 aa16.27■□□□□ 0.19
PHGDH-223ENST00000641597 OR4K1Q8NGD4 311 aa16.27■□□□□ 0.19
PHGDH-223ENST00000641597 OR52E4Q8NGH9 312 aa16.27■□□□□ 0.19
PHGDH-223ENST00000641597 NRBF2Q96F24 287 aa16.27■□□□□ 0.19
PHGDH-223ENST00000641597 GPN2Q9H9Y4 310 aaPredicted RBP16.27■□□□□ 0.19
PHGDH-223ENST00000641597 CCDC88CQ9P219 2028 aa16.26■□□□□ 0.19
PHGDH-223ENST00000641597 SLC16A6O15403 523 aa16.26■□□□□ 0.19
PHGDH-223ENST00000641597 RFPL2O75678 378 aa16.26■□□□□ 0.19
PHGDH-223ENST00000641597 C8AP07357 584 aa16.26■□□□□ 0.19
PHGDH-223ENST00000641597 JUPP14923 745 aa16.26■□□□□ 0.19
PHGDH-223ENST00000641597 ITGB8P26012 769 aa16.26■□□□□ 0.19
PHGDH-223ENST00000641597 RAD23AP54725 363 aa16.26■□□□□ 0.19
PHGDH-223ENST00000641597 RAE1P78406 368 aaKnown RBP16.26■□□□□ 0.19
PHGDH-223ENST00000641597 MEF2AQ02078 507 aaPredicted RBP16.26■□□□□ 0.19
PHGDH-223ENST00000641597 MVKQ03426 396 aa16.26■□□□□ 0.19
PHGDH-223ENST00000641597 GGTA1PQ4G0N0 100 aa16.26■□□□□ 0.19
PHGDH-223ENST00000641597 ARSIQ5FYB1 569 aa16.26■□□□□ 0.19
PHGDH-223ENST00000641597 ANGPTL8Q6UXH0 198 aa16.26■□□□□ 0.19
PHGDH-223ENST00000641597 HIPK1Q86Z02 1210 aa16.26■□□□□ 0.19
PHGDH-223ENST00000641597 WDR20Q8TBZ3 569 aa16.26■□□□□ 0.19
PHGDH-223ENST00000641597 FAM83DQ9H4H8 585 aa16.26■□□□□ 0.19
PHGDH-223ENST00000641597 TPT1P8Q9HAU6 139 aa16.26■□□□□ 0.19
PHGDH-223ENST00000641597 SPG21Q9NZD8 308 aa16.26■□□□□ 0.19
PHGDH-223ENST00000641597 VPS29Q9UBQ0 182 aa16.26■□□□□ 0.19
PHGDH-223ENST00000641597 RAPGEFL1Q9UHV5 662 aa16.26■□□□□ 0.19
PHGDH-223ENST00000641597 ENPP5Q9UJA9 477 aa16.26■□□□□ 0.19
PHGDH-223ENST00000641597 ORC6Q9Y5N6 252 aa16.26■□□□□ 0.19
PHGDH-223ENST00000641597 GMEB1Q9Y692 573 aa16.26■□□□□ 0.19
PHGDH-223ENST00000641597 PABPN1LA6NDY0 278 aaKnown RBP16.26■□□□□ 0.19
PHGDH-223ENST00000641597 MT-ND2P03891 347 aa16.26■□□□□ 0.19
PHGDH-223ENST00000641597 CTSLP07711 333 aa16.26■□□□□ 0.19
PHGDH-223ENST00000641597 NCS1P62166 190 aa16.26■□□□□ 0.19
PHGDH-223ENST00000641597 SLC7A9P82251 487 aa16.26■□□□□ 0.19
PHGDH-223ENST00000641597 MTAPQ13126 283 aa16.26■□□□□ 0.19
PHGDH-223ENST00000641597 CYP2A13Q16696 494 aa16.26■□□□□ 0.19
PHGDH-223ENST00000641597 OTOP2Q7RTS6 562 aa16.26■□□□□ 0.19
PHGDH-223ENST00000641597 CPXM2Q8N436 756 aa16.26■□□□□ 0.19
PHGDH-223ENST00000641597 ATG16L2Q8NAA4 619 aa16.26■□□□□ 0.19
PHGDH-223ENST00000641597 DDHD1Q8NEL9 900 aa16.26■□□□□ 0.19
PHGDH-223ENST00000641597 ZNF296Q8WUU4 475 aaPredicted RBP16.26■□□□□ 0.19
PHGDH-223ENST00000641597 ZNF641Q96N77 438 aaPredicted RBP16.26■□□□□ 0.19
PHGDH-223ENST00000641597 HERC2P3Q9BVR0 1158 aa16.26■□□□□ 0.19
PHGDH-223ENST00000641597 TRIT1Q9H3H1 467 aaKnown RBP16.26■□□□□ 0.19
PHGDH-223ENST00000641597 PNMA8BQ9ULN7 279 aaPredicted RBP16.26■□□□□ 0.19
PHGDH-223ENST00000641597 GMPPBQ9Y5P6 360 aa16.26■□□□□ 0.19
PHGDH-223ENST00000641597 NINQ8N4C6 2090 aa16.25■□□□□ 0.19
PHGDH-223ENST00000641597 TRAV19A0A0A6YYK7 116 aa16.25■□□□□ 0.19
PHGDH-223ENST00000641597 ZNF99A8MXY4 864 aaPredicted RBP16.25■□□□□ 0.19
PHGDH-223ENST00000641597 M0R129 80 aa16.25■□□□□ 0.19
PHGDH-223ENST00000641597 PCDH7O60245 1069 aa16.25■□□□□ 0.19
PHGDH-223ENST00000641597 EPN2O95208 641 aa16.25■□□□□ 0.19
PHGDH-223ENST00000641597 POP4O95707 220 aaKnown RBP16.25■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms