RNA–Protein interactions for RNA: ENST00000641213.1

PHGDH-211, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 2,053 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-211ENST00000641213 ZNF480Q8WV37 535 aa16.5■□□□□ 0.23
PHGDH-211ENST00000641213 NEIL2Q969S2 332 aa16.5■□□□□ 0.23
PHGDH-211ENST00000641213 SDCCAG3Q96C92 435 aa16.5■□□□□ 0.23
PHGDH-211ENST00000641213 ERVK-11Q9UQG0 969 aa16.5■□□□□ 0.23
PHGDH-211ENST00000641213 EVPLLA8MZ36 301 aa16.49■□□□□ 0.23
PHGDH-211ENST00000641213 GNGT2O14610 69 aa16.49■□□□□ 0.23
PHGDH-211ENST00000641213 MYO1DO94832 1006 aa16.49■□□□□ 0.23
PHGDH-211ENST00000641213 C6P13671 934 aa16.49■□□□□ 0.23
PHGDH-211ENST00000641213 RAET1GQ6H3X3 334 aa16.49■□□□□ 0.23
PHGDH-211ENST00000641213 XKR5Q6UX68 686 aa16.49■□□□□ 0.23
PHGDH-211ENST00000641213 SLCO4C1Q6ZQN7 724 aa16.49■□□□□ 0.23
PHGDH-211ENST00000641213 ZNF765Q7L2R6 523 aa16.49■□□□□ 0.23
PHGDH-211ENST00000641213 TRAPPC5Q8IUR0 188 aa16.49■□□□□ 0.23
PHGDH-211ENST00000641213 SFTPA1Q8IWL2 248 aa16.49■□□□□ 0.23
PHGDH-211ENST00000641213 ALDH16A1Q8IZ83 802 aa16.49■□□□□ 0.23
PHGDH-211ENST00000641213 SVOPLQ8N434 492 aa16.49■□□□□ 0.23
PHGDH-211ENST00000641213 C1orf52Q8N6N3 182 aaKnown RBP16.49■□□□□ 0.23
PHGDH-211ENST00000641213 HUS1BQ8NHY5 278 aa16.49■□□□□ 0.23
PHGDH-211ENST00000641213 CDC26Q8NHZ8 85 aa16.49■□□□□ 0.23
PHGDH-211ENST00000641213 PYURFQ96I23 114 aa16.49■□□□□ 0.23
PHGDH-211ENST00000641213 MUS81Q96NY9 551 aa16.49■□□□□ 0.23
PHGDH-211ENST00000641213 FAM129BQ96TA1 746 aa16.49■□□□□ 0.23
PHGDH-211ENST00000641213 OSBPL10Q9BXB5 764 aa16.49■□□□□ 0.23
PHGDH-211ENST00000641213 ZCCHC2Q9C0B9 1178 aaKnown RBP16.49■□□□□ 0.23
PHGDH-211ENST00000641213 SMURF2Q9HAU4 748 aa16.49■□□□□ 0.23
PHGDH-211ENST00000641213 FAM120CQ9NX05 1096 aaKnown RBP16.49■□□□□ 0.23
PHGDH-211ENST00000641213 DEC1Q9P2X7 70 aa16.49■□□□□ 0.23
PHGDH-211ENST00000641213 KCNE2Q9Y6J6 123 aa16.49■□□□□ 0.23
PHGDH-211ENST00000641213 COL4A3Q01955 1670 aa16.49■□□□□ 0.23
PHGDH-211ENST00000641213 CLIC1O00299 241 aa16.49■□□□□ 0.23
PHGDH-211ENST00000641213 YY2O15391 372 aa16.49■□□□□ 0.23
PHGDH-211ENST00000641213 MMP20O60882 483 aa16.49■□□□□ 0.23
PHGDH-211ENST00000641213 SH3BGRLO75368 114 aa16.49■□□□□ 0.23
PHGDH-211ENST00000641213 NFATC1O95644 943 aa16.49■□□□□ 0.23
PHGDH-211ENST00000641213 RB1P06400 928 aa16.49■□□□□ 0.23
PHGDH-211ENST00000641213 LAMP1P11279 417 aa16.49■□□□□ 0.23
PHGDH-211ENST00000641213 ADRB3P13945 408 aa16.49■□□□□ 0.23
PHGDH-211ENST00000641213 ENGP17813 658 aa16.49■□□□□ 0.23
PHGDH-211ENST00000641213 SLC5A2P31639 672 aa16.49■□□□□ 0.23
PHGDH-211ENST00000641213 GPR1P46091 355 aa16.49■□□□□ 0.23
PHGDH-211ENST00000641213 DYNC1I2Q13409 638 aaKnown RBP16.49■□□□□ 0.23
PHGDH-211ENST00000641213 ANKRD26P1Q6NSI1 321 aa16.49■□□□□ 0.23
PHGDH-211ENST00000641213 TMC5Q6UXY8 1006 aa16.49■□□□□ 0.23
PHGDH-211ENST00000641213 ADGRD2Q7Z7M1 963 aa16.49■□□□□ 0.23
PHGDH-211ENST00000641213 CLECL1Q8IZS7 167 aa16.49■□□□□ 0.23
PHGDH-211ENST00000641213 HS3ST5Q8IZT8 346 aa16.49■□□□□ 0.23
PHGDH-211ENST00000641213 ZCCHC7Q8N3Z6 543 aaKnown RBP16.49■□□□□ 0.23
PHGDH-211ENST00000641213 POP5Q969H6 163 aaKnown RBP16.49■□□□□ 0.23
PHGDH-211ENST00000641213 TMEM106CQ9BVX2 250 aa16.49■□□□□ 0.23
PHGDH-211ENST00000641213 RSL24D1Q9UHA3 163 aaKnown RBP16.49■□□□□ 0.23
PHGDH-211ENST00000641213 BTBD3Q9Y2F9 522 aa16.49■□□□□ 0.23
PHGDH-211ENST00000641213 HEPACAM2A8MVW5 462 aa16.48■□□□□ 0.23
PHGDH-211ENST00000641213 CPSF4O95639 269 aaKnown RBP16.48■□□□□ 0.23
PHGDH-211ENST00000641213 CDK9P50750 372 aaKnown RBP16.48■□□□□ 0.23
PHGDH-211ENST00000641213 TBPL1P62380 186 aa16.48■□□□□ 0.23
PHGDH-211ENST00000641213 PPP2R2BQ00005 443 aa16.48■□□□□ 0.23
PHGDH-211ENST00000641213 VAC14Q08AM6 782 aa16.48■□□□□ 0.23
PHGDH-211ENST00000641213 ELAVL3Q14576 367 aaKnown RBP16.48■□□□□ 0.23
PHGDH-211ENST00000641213 MYBPC3Q14896 1274 aa16.48■□□□□ 0.23
PHGDH-211ENST00000641213 ZNF621Q6ZSS3 439 aa16.48■□□□□ 0.23
PHGDH-211ENST00000641213 TMEM179BQ7Z7N9 219 aa16.48■□□□□ 0.23
PHGDH-211ENST00000641213 TMPRSS11BQ86T26 416 aa16.48■□□□□ 0.23
PHGDH-211ENST00000641213 ADHFE1Q8IWW8 467 aa16.48■□□□□ 0.23
PHGDH-211ENST00000641213 SYTL1Q8IYJ3 562 aa16.48■□□□□ 0.23
PHGDH-211ENST00000641213 ST13P5Q8NFI4 369 aaPredicted RBP16.48■□□□□ 0.23
PHGDH-211ENST00000641213 OR10Q1Q8NGQ4 319 aa16.48■□□□□ 0.23
PHGDH-211ENST00000641213 CHTF18Q8WVB6 975 aa16.48■□□□□ 0.23
PHGDH-211ENST00000641213 RDH12Q96NR8 316 aa16.48■□□□□ 0.23
PHGDH-211ENST00000641213 YTHDF1Q9BYJ9 559 aaKnown RBP16.48■□□□□ 0.23
PHGDH-211ENST00000641213 TOR3AQ9H497 397 aa16.48■□□□□ 0.23
PHGDH-211ENST00000641213 AASDHPPTQ9NRN7 309 aa16.48■□□□□ 0.23
PHGDH-211ENST00000641213 USE1Q9NZ43 259 aa16.48■□□□□ 0.23
PHGDH-211ENST00000641213 ATXN10Q9UBB4 475 aa16.48■□□□□ 0.23
PHGDH-211ENST00000641213 SCAMP2O15127 329 aaKnown RBP16.47■□□□□ 0.23
PHGDH-211ENST00000641213 LZTS3O60299 673 aaPredicted RBP16.47■□□□□ 0.23
PHGDH-211ENST00000641213 EPN2O95208 641 aa16.47■□□□□ 0.23
PHGDH-211ENST00000641213 CCNDBP1O95273 360 aa16.47■□□□□ 0.23
PHGDH-211ENST00000641213 PAPLNO95428 1278 aa16.47■□□□□ 0.23
PHGDH-211ENST00000641213 ANXA4P09525 319 aaPredicted RBP16.47■□□□□ 0.23
PHGDH-211ENST00000641213 NPPBP16860 134 aa16.47■□□□□ 0.23
PHGDH-211ENST00000641213 HOXB6P17509 224 aaKnown RBP16.47■□□□□ 0.23
PHGDH-211ENST00000641213 GPX2P18283 190 aa16.47■□□□□ 0.23
PHGDH-211ENST00000641213 PCSK6P29122 969 aa16.47■□□□□ 0.23
PHGDH-211ENST00000641213 DPTQ07507 201 aa16.47■□□□□ 0.23
PHGDH-211ENST00000641213 ZNF234Q14588 700 aa16.47■□□□□ 0.23
PHGDH-211ENST00000641213 CCNYL2Q5T2Q4 361 aa16.47■□□□□ 0.23
PHGDH-211ENST00000641213 CAPN13Q6MZZ7 669 aaPredicted RBP16.47■□□□□ 0.23
PHGDH-211ENST00000641213 ZCCHC8Q6NZY4 707 aaKnown RBP16.47■□□□□ 0.23
PHGDH-211ENST00000641213 GPR155Q7Z3F1 870 aa16.47■□□□□ 0.23
PHGDH-211ENST00000641213 ZNF547Q8IVP9 402 aa16.47■□□□□ 0.23
PHGDH-211ENST00000641213 NPAS3Q8IXF0 933 aa16.47■□□□□ 0.23
PHGDH-211ENST00000641213 OR5K1Q8NHB7 308 aa16.47■□□□□ 0.23
PHGDH-211ENST00000641213 STARD8Q92502 1023 aa16.47■□□□□ 0.23
PHGDH-211ENST00000641213 ASB16Q96NS5 453 aa16.47■□□□□ 0.23
PHGDH-211ENST00000641213 DUSP26Q9BV47 211 aa16.47■□□□□ 0.23
PHGDH-211ENST00000641213 TRIM39Q9HCM9 518 aa16.47■□□□□ 0.23
PHGDH-211ENST00000641213 SH2B3Q9UQQ2 575 aa16.47■□□□□ 0.23
PHGDH-211ENST00000641213 GABRR3A8MPY1 467 aa16.47■□□□□ 0.23
PHGDH-211ENST00000641213 NOBOXO60393 691 aa16.47■□□□□ 0.23
PHGDH-211ENST00000641213 KCNK5O95279 499 aa16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms