RNA–Protein interactions for RNA: ENST00000639856.1

TRIM3-215, Transcript of tripartite motif containing 3, humanhuman

TSL 5 BASIC

Gene TRIM3, Length 2,137 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3-215ENST00000639856 TRIM4Q9C037 500 aa14.6□□□□□ -0.07
TRIM3-215ENST00000639856 KAT8Q9H7Z6 458 aaKnown RBP14.6□□□□□ -0.07
TRIM3-215ENST00000639856 NTN4Q9HB63 628 aa14.6□□□□□ -0.07
TRIM3-215ENST00000639856 SLC6A13Q9NSD5 602 aa14.6□□□□□ -0.07
TRIM3-215ENST00000639856 ADGRE2Q9UHX3 823 aa14.6□□□□□ -0.07
TRIM3-215ENST00000639856 PPT2Q9UMR5 302 aa14.6□□□□□ -0.07
TRIM3-215ENST00000639856 C2CD4DB7Z1M9 353 aa14.6□□□□□ -0.07
TRIM3-215ENST00000639856 ADAM23O75077 832 aa14.6□□□□□ -0.07
TRIM3-215ENST00000639856 CATP04040 527 aaKnown RBP14.6□□□□□ -0.07
TRIM3-215ENST00000639856 PCCBP05166 539 aa14.6□□□□□ -0.07
TRIM3-215ENST00000639856 ETS2P15036 469 aa14.6□□□□□ -0.07
TRIM3-215ENST00000639856 ZNF8P17098 575 aaPredicted RBP14.6□□□□□ -0.07
TRIM3-215ENST00000639856 CD22P20273 847 aa14.6□□□□□ -0.07
TRIM3-215ENST00000639856 CSTF3Q12996 717 aaKnown RBP14.6□□□□□ -0.07
TRIM3-215ENST00000639856 CCSMST1Q4G0I0 132 aa14.6□□□□□ -0.07
TRIM3-215ENST00000639856 NOXRED1Q6NXP6 359 aa14.6□□□□□ -0.07
TRIM3-215ENST00000639856 THOC6Q86W42 341 aaKnown RBP14.6□□□□□ -0.07
TRIM3-215ENST00000639856 ZNF547Q8IVP9 402 aa14.6□□□□□ -0.07
TRIM3-215ENST00000639856 TMEM132CQ8N3T6 1108 aa14.6□□□□□ -0.07
TRIM3-215ENST00000639856 EGLN2Q96KS0 407 aa14.6□□□□□ -0.07
TRIM3-215ENST00000639856 FCRL1Q96LA6 429 aa14.6□□□□□ -0.07
TRIM3-215ENST00000639856 APOLD1Q96LR9 279 aa14.6□□□□□ -0.07
TRIM3-215ENST00000639856 CCDC138Q96M89 665 aa14.6□□□□□ -0.07
TRIM3-215ENST00000639856 HHIPQ96QV1 700 aa14.6□□□□□ -0.07
TRIM3-215ENST00000639856 CPPED1Q9BRF8 314 aaPredicted RBP14.6□□□□□ -0.07
TRIM3-215ENST00000639856 PRO3102Q9H379 93 aa14.6□□□□□ -0.07
TRIM3-215ENST00000639856 CD207Q9UJ71 328 aa14.6□□□□□ -0.07
TRIM3-215ENST00000639856 TMEM98Q9Y2Y6 226 aa14.6□□□□□ -0.07
TRIM3-215ENST00000639856 MYO10Q9HD67 2058 aa14.6□□□□□ -0.07
TRIM3-215ENST00000639856 UPK1AO00322 258 aa14.59□□□□□ -0.07
TRIM3-215ENST00000639856 SCELO95171 688 aa14.59□□□□□ -0.07
TRIM3-215ENST00000639856 ADH1BP00325 375 aa14.59□□□□□ -0.07
TRIM3-215ENST00000639856 HOXB9P17482 250 aaPredicted RBP14.59□□□□□ -0.07
TRIM3-215ENST00000639856 C5AR1P21730 350 aa14.59□□□□□ -0.07
TRIM3-215ENST00000639856 BDKRB1P46663 353 aa14.59□□□□□ -0.07
TRIM3-215ENST00000639856 BORAQ6PGQ7 559 aa14.59□□□□□ -0.07
TRIM3-215ENST00000639856 DOK6Q6PKX4 331 aa14.59□□□□□ -0.07
TRIM3-215ENST00000639856 AGTRAPQ6RW13 159 aa14.59□□□□□ -0.07
TRIM3-215ENST00000639856 XKR5Q6UX68 686 aa14.59□□□□□ -0.07
TRIM3-215ENST00000639856 GCNT7Q6ZNI0 430 aa14.59□□□□□ -0.07
TRIM3-215ENST00000639856 GPR180Q86V85 440 aa14.59□□□□□ -0.07
TRIM3-215ENST00000639856 MICU2Q8IYU8 434 aa14.59□□□□□ -0.07
TRIM3-215ENST00000639856 PHACTR4Q8IZ21 702 aa14.59□□□□□ -0.07
TRIM3-215ENST00000639856 DHRSXQ8N5I4 330 aa14.59□□□□□ -0.07
TRIM3-215ENST00000639856 TRIML2Q8N7C3 387 aa14.59□□□□□ -0.07
TRIM3-215ENST00000639856 IL17RCQ8NAC3 791 aa14.59□□□□□ -0.07
TRIM3-215ENST00000639856 ZFP28Q8NHY6 868 aa14.59□□□□□ -0.07
TRIM3-215ENST00000639856 CYGBQ8WWM9 190 aa14.59□□□□□ -0.07
TRIM3-215ENST00000639856 TBCDQ9BTW9 1192 aa14.59□□□□□ -0.07
TRIM3-215ENST00000639856 TRIM39Q9HCM9 518 aa14.59□□□□□ -0.07
TRIM3-215ENST00000639856 STOX2Q9P2F5 926 aaPredicted RBP14.59□□□□□ -0.07
TRIM3-215ENST00000639856 LIMD1Q9UGP4 676 aa14.59□□□□□ -0.07
TRIM3-215ENST00000639856 DMTF1Q9Y222 760 aa14.59□□□□□ -0.07
TRIM3-215ENST00000639856 PRKAB1Q9Y478 270 aa14.59□□□□□ -0.07
TRIM3-215ENST00000639856 PRR23AA6NEV1 266 aa14.59□□□□□ -0.07
TRIM3-215ENST00000639856 FAM220BPB1ANY3 271 aa14.59□□□□□ -0.07
TRIM3-215ENST00000639856 CXCR6O00574 342 aa14.59□□□□□ -0.07
TRIM3-215ENST00000639856 CLGNO14967 610 aa14.59□□□□□ -0.07
TRIM3-215ENST00000639856 COL9A1P20849 921 aa14.59□□□□□ -0.07
TRIM3-215ENST00000639856 PTPN6P29350 595 aa14.59□□□□□ -0.07
TRIM3-215ENST00000639856 NTSR1P30989 418 aa14.59□□□□□ -0.07
TRIM3-215ENST00000639856 CAPGP40121 348 aa14.59□□□□□ -0.07
TRIM3-215ENST00000639856 MAPK9P45984 424 aa14.59□□□□□ -0.07
TRIM3-215ENST00000639856 TUBA4AP68366 448 aa14.59□□□□□ -0.07
TRIM3-215ENST00000639856 WSCD2Q2TBF2 565 aa14.59□□□□□ -0.07
TRIM3-215ENST00000639856 PGS1Q32NB8 556 aa14.59□□□□□ -0.07
TRIM3-215ENST00000639856 KCTD21Q4G0X4 260 aa14.59□□□□□ -0.07
TRIM3-215ENST00000639856 BCL7AQ4VC05 210 aa14.59□□□□□ -0.07
TRIM3-215ENST00000639856 CYBRD1Q53TN4 286 aa14.59□□□□□ -0.07
TRIM3-215ENST00000639856 XKR6Q5GH73 641 aa14.59□□□□□ -0.07
TRIM3-215ENST00000639856 ZNF776Q68DI1 518 aaPredicted RBP14.59□□□□□ -0.07
TRIM3-215ENST00000639856 TBPL2Q6SJ96 375 aa14.59□□□□□ -0.07
TRIM3-215ENST00000639856 MSANTD1Q6ZTZ1 278 aa14.59□□□□□ -0.07
TRIM3-215ENST00000639856 HEATR4Q86WZ0 1026 aa14.59□□□□□ -0.07
TRIM3-215ENST00000639856 CALHM3Q86XJ0 350 aa14.59□□□□□ -0.07
TRIM3-215ENST00000639856 KLHDC8AQ8IYD2 350 aa14.59□□□□□ -0.07
TRIM3-215ENST00000639856 RNF175Q8N4F7 328 aa14.59□□□□□ -0.07
TRIM3-215ENST00000639856 FAM86B1Q8N7N1 296 aa14.59□□□□□ -0.07
TRIM3-215ENST00000639856 FBXO30Q8TB52 745 aa14.59□□□□□ -0.07
TRIM3-215ENST00000639856 WDR20Q8TBZ3 569 aa14.59□□□□□ -0.07
TRIM3-215ENST00000639856 KLK6Q92876 244 aa14.59□□□□□ -0.07
TRIM3-215ENST00000639856 INPP5KQ9BT40 448 aa14.59□□□□□ -0.07
TRIM3-215ENST00000639856 LGR4Q9BXB1 951 aa14.59□□□□□ -0.07
TRIM3-215ENST00000639856 ZCCHC2Q9C0B9 1178 aaKnown RBP14.59□□□□□ -0.07
TRIM3-215ENST00000639856 CARS2Q9HA77 564 aaKnown RBP14.59□□□□□ -0.07
TRIM3-215ENST00000639856 PIAS3Q9Y6X2 628 aa14.59□□□□□ -0.07
TRIM3-215ENST00000639856 E7EQ34 232 aa14.58□□□□□ -0.08
TRIM3-215ENST00000639856 LRATO95237 230 aa14.58□□□□□ -0.08
TRIM3-215ENST00000639856 KLF8O95600 359 aaPredicted RBP14.58□□□□□ -0.08
TRIM3-215ENST00000639856 RETP07949 1114 aa14.58□□□□□ -0.08
TRIM3-215ENST00000639856 PCNAP12004 261 aa14.58□□□□□ -0.08
TRIM3-215ENST00000639856 NAE1Q13564 534 aa14.58□□□□□ -0.08
TRIM3-215ENST00000639856 DOC2AQ14183 400 aa14.58□□□□□ -0.08
TRIM3-215ENST00000639856 FGL2Q14314 439 aa14.58□□□□□ -0.08
TRIM3-215ENST00000639856 TMEM214Q6NUQ4 689 aaKnown RBP14.58□□□□□ -0.08
TRIM3-215ENST00000639856 PNCKQ6P2M8 343 aa14.58□□□□□ -0.08
TRIM3-215ENST00000639856 TTC33Q6PID6 262 aaPredicted RBP14.58□□□□□ -0.08
TRIM3-215ENST00000639856 ENPP6Q6UWR7 440 aa14.58□□□□□ -0.08
TRIM3-215ENST00000639856 ANKRD46Q86W74 232 aa14.58□□□□□ -0.08
TRIM3-215ENST00000639856 CFAP206Q8IYR0 622 aa14.58□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms