RNA–Protein interactions for RNA: ENST00000635988.1

CACNA1A-220, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 2,548 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-220ENST00000635988 CTPS1P17812 591 aa14.36□□□□□ -0.11
CACNA1A-220ENST00000635988 PTX3P26022 381 aaPredicted RBP14.36□□□□□ -0.11
CACNA1A-220ENST00000635988 GRK5P34947 590 aa14.36□□□□□ -0.11
CACNA1A-220ENST00000635988 MTAPQ13126 283 aa14.36□□□□□ -0.11
CACNA1A-220ENST00000635988 C10orf62Q5T681 223 aaPredicted RBP14.36□□□□□ -0.11
CACNA1A-220ENST00000635988 SPATC1Q76KD6 591 aa14.36□□□□□ -0.11
CACNA1A-220ENST00000635988 NLGN4XQ8N0W4 816 aa14.36□□□□□ -0.11
CACNA1A-220ENST00000635988 DEPDC7Q96QD5 511 aa14.36□□□□□ -0.11
CACNA1A-220ENST00000635988 PANX1Q96RD7 426 aa14.36□□□□□ -0.11
CACNA1A-220ENST00000635988 CENPOQ9BU64 300 aa14.36□□□□□ -0.11
CACNA1A-220ENST00000635988 RUBCNLQ9H714 662 aa14.36□□□□□ -0.11
CACNA1A-220ENST00000635988 C3orf14Q9HBI5 128 aa14.36□□□□□ -0.11
CACNA1A-220ENST00000635988 ITM2CQ9NQX7 267 aa14.36□□□□□ -0.11
CACNA1A-220ENST00000635988 DYRK4Q9NR20 520 aa14.36□□□□□ -0.11
CACNA1A-220ENST00000635988 PCDHGB2Q9Y5G2 931 aa14.36□□□□□ -0.11
CACNA1A-220ENST00000635988 NPIPB8E9PQR5 432 aa14.36□□□□□ -0.11
CACNA1A-220ENST00000635988 FPGTO14772 594 aa14.36□□□□□ -0.11
CACNA1A-220ENST00000635988 NDUFB5O43674 189 aa14.36□□□□□ -0.11
CACNA1A-220ENST00000635988 SLITRK5O94991 958 aa14.36□□□□□ -0.11
CACNA1A-220ENST00000635988 OAZ2O95190 189 aa14.36□□□□□ -0.11
CACNA1A-220ENST00000635988 PDYNP01213 254 aa14.36□□□□□ -0.11
CACNA1A-220ENST00000635988 VIPP01282 170 aa14.36□□□□□ -0.11
CACNA1A-220ENST00000635988 SDC1P18827 310 aa14.36□□□□□ -0.11
CACNA1A-220ENST00000635988 PRPS1L1P21108 318 aa14.36□□□□□ -0.11
CACNA1A-220ENST00000635988 BEX3Q00994 111 aa14.36□□□□□ -0.11
CACNA1A-220ENST00000635988 SRSF11Q05519 484 aaKnown RBP14.36□□□□□ -0.11
CACNA1A-220ENST00000635988 CPSF6Q16630 551 aaKnown RBP eCLIP14.36□□□□□ -0.11
CACNA1A-220ENST00000635988 LRRC26Q2I0M4 334 aa14.36□□□□□ -0.11
CACNA1A-220ENST00000635988 GNASQ5JWF2 1037 aa14.36□□□□□ -0.11
CACNA1A-220ENST00000635988 CDKL4Q5MAI5 379 aa14.36□□□□□ -0.11
CACNA1A-220ENST00000635988 OR4F3Q6IEY1 312 aa14.36□□□□□ -0.11
CACNA1A-220ENST00000635988 OR7G1Q8NGA0 311 aa14.36□□□□□ -0.11
CACNA1A-220ENST00000635988 CHTF18Q8WVB6 975 aa14.36□□□□□ -0.11
CACNA1A-220ENST00000635988 MTFMTQ96DP5 389 aaKnown RBP14.36□□□□□ -0.11
CACNA1A-220ENST00000635988 C7orf34Q96L11 122 aa14.36□□□□□ -0.11
CACNA1A-220ENST00000635988 Q96MT0 163 aa14.36□□□□□ -0.11
CACNA1A-220ENST00000635988 KCNC2Q96PR1 638 aa14.36□□□□□ -0.11
CACNA1A-220ENST00000635988 ADPRHL2Q9NX46 363 aa14.36□□□□□ -0.11
CACNA1A-220ENST00000635988 Q9Y3F1 56 aa14.36□□□□□ -0.11
CACNA1A-220ENST00000635988 A0A0U1RQF3 1178 aa14.35□□□□□ -0.11
CACNA1A-220ENST00000635988 MAGEB17A8MXT2 336 aa14.35□□□□□ -0.11
CACNA1A-220ENST00000635988 TNFRSF10AO00220 468 aa14.35□□□□□ -0.11
CACNA1A-220ENST00000635988 PRMT3O60678 531 aa14.35□□□□□ -0.11
CACNA1A-220ENST00000635988 F11P03951 625 aa14.35□□□□□ -0.11
CACNA1A-220ENST00000635988 ITGB6P18564 788 aa14.35□□□□□ -0.11
CACNA1A-220ENST00000635988 CD72P21854 359 aa14.35□□□□□ -0.11
CACNA1A-220ENST00000635988 GRK4P32298 578 aa14.35□□□□□ -0.11
CACNA1A-220ENST00000635988 PRIM2P49643 509 aa14.35□□□□□ -0.11
CACNA1A-220ENST00000635988 GPR50Q13585 617 aa14.35□□□□□ -0.11
CACNA1A-220ENST00000635988 IRF3Q14653 427 aa14.35□□□□□ -0.11
CACNA1A-220ENST00000635988 GGTA1PQ4G0N0 100 aa14.35□□□□□ -0.11
CACNA1A-220ENST00000635988 IQCCQ4KMZ1 466 aa14.35□□□□□ -0.11
CACNA1A-220ENST00000635988 PDE12Q6L8Q7 609 aaKnown RBP14.35□□□□□ -0.11
CACNA1A-220ENST00000635988 PTOV1Q86YD1 416 aa14.35□□□□□ -0.11
CACNA1A-220ENST00000635988 RAB43Q86YS6 212 aa14.35□□□□□ -0.11
CACNA1A-220ENST00000635988 ZBTB2Q8N680 514 aa14.35□□□□□ -0.11
CACNA1A-220ENST00000635988 TTC16Q8NEE8 873 aa14.35□□□□□ -0.11
CACNA1A-220ENST00000635988 CSGALNACT1Q8TDX6 532 aa14.35□□□□□ -0.11
CACNA1A-220ENST00000635988 TRIM63Q969Q1 353 aa14.35□□□□□ -0.11
CACNA1A-220ENST00000635988 ELOVL6Q9H5J4 265 aa14.35□□□□□ -0.11
CACNA1A-220ENST00000635988 PADI2Q9Y2J8 665 aa14.35□□□□□ -0.11
CACNA1A-220ENST00000635988 NOTOA8MTQ0 251 aa14.35□□□□□ -0.11
CACNA1A-220ENST00000635988 ADAMDEC1O15204 470 aa14.35□□□□□ -0.11
CACNA1A-220ENST00000635988 SLC25A14O95258 325 aaPredicted RBP14.35□□□□□ -0.11
CACNA1A-220ENST00000635988 ANXA5P08758 320 aa14.35□□□□□ -0.11
CACNA1A-220ENST00000635988 STSP08842 583 aa14.35□□□□□ -0.11
CACNA1A-220ENST00000635988 CTSHP09668 335 aa14.35□□□□□ -0.11
CACNA1A-220ENST00000635988 ZNF865P0CJ78 1059 aaPredicted RBP14.35□□□□□ -0.11
CACNA1A-220ENST00000635988 ANXA8P13928 327 aa14.35□□□□□ -0.11
CACNA1A-220ENST00000635988 HMGCLP35914 325 aa14.35□□□□□ -0.11
CACNA1A-220ENST00000635988 HNF4AP41235 474 aa14.35□□□□□ -0.11
CACNA1A-220ENST00000635988 SPRYD7Q5W111 196 aa14.35□□□□□ -0.11
CACNA1A-220ENST00000635988 ZNF517Q6ZMY9 492 aaPredicted RBP14.35□□□□□ -0.11
CACNA1A-220ENST00000635988 SERPINA9Q86WD7 417 aa14.35□□□□□ -0.11
CACNA1A-220ENST00000635988 KRT73Q86Y46 540 aa14.35□□□□□ -0.11
CACNA1A-220ENST00000635988 KLHDC9Q8NEP7 349 aa14.35□□□□□ -0.11
CACNA1A-220ENST00000635988 SDHCQ99643 169 aaPredicted RBP14.35□□□□□ -0.11
CACNA1A-220ENST00000635988 TTPALQ9BTX7 342 aa14.35□□□□□ -0.11
CACNA1A-220ENST00000635988 GPR63Q9BZJ6 419 aa14.35□□□□□ -0.11
CACNA1A-220ENST00000635988 SLC32A1Q9H598 525 aa14.35□□□□□ -0.11
CACNA1A-220ENST00000635988 TAS2R9Q9NYW1 312 aa14.35□□□□□ -0.11
CACNA1A-220ENST00000635988 POFUT2Q9Y2G5 429 aa14.35□□□□□ -0.11
CACNA1A-220ENST00000635988 SUV39H1O43463 412 aa14.34□□□□□ -0.11
CACNA1A-220ENST00000635988 KIAA0513O60268 411 aa14.34□□□□□ -0.11
CACNA1A-220ENST00000635988 TLR5O60602 858 aa14.34□□□□□ -0.11
CACNA1A-220ENST00000635988 ALX3O95076 343 aa14.34□□□□□ -0.11
CACNA1A-220ENST00000635988 PTHP01270 115 aa14.34□□□□□ -0.11
CACNA1A-220ENST00000635988 ITGA2P17301 1181 aa14.34□□□□□ -0.11
CACNA1A-220ENST00000635988 TACR1P25103 407 aa14.34□□□□□ -0.11
CACNA1A-220ENST00000635988 CA5AP35218 305 aa14.34□□□□□ -0.11
CACNA1A-220ENST00000635988 PURAQ00577 322 aaKnown RBP14.34□□□□□ -0.11
CACNA1A-220ENST00000635988 CHRNEQ04844 493 aa14.34□□□□□ -0.11
CACNA1A-220ENST00000635988 ST3GAL4Q11206 333 aa14.34□□□□□ -0.11
CACNA1A-220ENST00000635988 TAF10Q12962 218 aa14.34□□□□□ -0.11
CACNA1A-220ENST00000635988 BOP1Q14137 746 aaKnown RBP14.34□□□□□ -0.11
CACNA1A-220ENST00000635988 BCL7AQ4VC05 210 aa14.34□□□□□ -0.11
CACNA1A-220ENST00000635988 ZNF621Q6ZSS3 439 aa14.34□□□□□ -0.11
CACNA1A-220ENST00000635988 OR8H2Q8N162 312 aa14.34□□□□□ -0.11
CACNA1A-220ENST00000635988 CYP4Z2PQ8N1L4 340 aa14.34□□□□□ -0.11
CACNA1A-220ENST00000635988 GRPEL2Q8TAA5 225 aa14.34□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms