RNA–Protein interactions for RNA: ENST00000625299.1

PNKP-218, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 428 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-218ENST00000625299 SIGLEC12Q96PQ1 595 aa13.91□□□□□ -0.18
PNKP-218ENST00000625299 ANAPC5Q9UJX4 755 aa13.91□□□□□ -0.18
PNKP-218ENST00000625299 EFR3BQ9Y2G0 817 aa13.91□□□□□ -0.18
PNKP-218ENST00000625299 ZNF835Q9Y2P0 537 aa13.91□□□□□ -0.18
PNKP-218ENST00000625299 KLK4Q9Y5K2 254 aa13.91□□□□□ -0.18
PNKP-218ENST00000625299 GTF3C1Q12789 2109 aa13.91□□□□□ -0.18
PNKP-218ENST00000625299 NAV3Q8IVL0 2385 aa13.9□□□□□ -0.18
PNKP-218ENST00000625299 A0A1W2PPV9 198 aa13.9□□□□□ -0.18
PNKP-218ENST00000625299 PSMD3O43242 534 aa13.9□□□□□ -0.18
PNKP-218ENST00000625299 ZNF189O75820 626 aaPredicted RBP13.9□□□□□ -0.18
PNKP-218ENST00000625299 CD1EP15812 388 aa13.9□□□□□ -0.18
PNKP-218ENST00000625299 EEF1DP29692 281 aaKnown RBP13.9□□□□□ -0.18
PNKP-218ENST00000625299 PTPN7P35236 360 aa13.9□□□□□ -0.18
PNKP-218ENST00000625299 PPARGP37231 505 aaPredicted RBP13.9□□□□□ -0.18
PNKP-218ENST00000625299 CETN2P41208 172 aa13.9□□□□□ -0.18
PNKP-218ENST00000625299 GDF10P55107 478 aa13.9□□□□□ -0.18
PNKP-218ENST00000625299 HSF1Q00613 529 aa13.9□□□□□ -0.18
PNKP-218ENST00000625299 CDH17Q12864 832 aa13.9□□□□□ -0.18
PNKP-218ENST00000625299 TUBA3CQ13748 450 aa13.9□□□□□ -0.18
PNKP-218ENST00000625299 NAA25Q14CX7 972 aa13.9□□□□□ -0.18
PNKP-218ENST00000625299 OR1C1Q15619 314 aa13.9□□□□□ -0.18
PNKP-218ENST00000625299 MINDY4Q4G0A6 757 aa13.9□□□□□ -0.18
PNKP-218ENST00000625299 ACER2Q5QJU3 275 aa13.9□□□□□ -0.18
PNKP-218ENST00000625299 TSTD2Q5T7W7 516 aa13.9□□□□□ -0.18
PNKP-218ENST00000625299 TUBA3EQ6PEY2 450 aa13.9□□□□□ -0.18
PNKP-218ENST00000625299 TMEM205Q6UW68 189 aa13.9□□□□□ -0.18
PNKP-218ENST00000625299 SUSD1Q6UWL2 747 aa13.9□□□□□ -0.18
PNKP-218ENST00000625299 PPP1R21Q6ZMI0 780 aa13.9□□□□□ -0.18
PNKP-218ENST00000625299 Q6ZPB1 254 aaPredicted RBP13.9□□□□□ -0.18
PNKP-218ENST00000625299 LANCL3Q6ZV70 420 aa13.9□□□□□ -0.18
PNKP-218ENST00000625299 LINC00523Q86TU6 105 aa13.9□□□□□ -0.18
PNKP-218ENST00000625299 HMGCLL1Q8TB92 370 aa13.9□□□□□ -0.18
PNKP-218ENST00000625299 RERGQ96A58 199 aaPredicted RBP13.9□□□□□ -0.18
PNKP-218ENST00000625299 ZNF354BQ96LW1 612 aa13.9□□□□□ -0.18
PNKP-218ENST00000625299 ZNF778Q96MU6 729 aa13.9□□□□□ -0.18
PNKP-218ENST00000625299 FOPNLQ96NB1 174 aa13.9□□□□□ -0.18
PNKP-218ENST00000625299 UTP23Q9BRU9 249 aaKnown RBP13.9□□□□□ -0.18
PNKP-218ENST00000625299 TGIF2Q9GZN2 237 aa13.9□□□□□ -0.18
PNKP-218ENST00000625299 DRC3Q9H069 523 aa13.9□□□□□ -0.18
PNKP-218ENST00000625299 SYNPO2LQ9H987 977 aa13.9□□□□□ -0.18
PNKP-218ENST00000625299 KCNK13Q9HB14 408 aa13.9□□□□□ -0.18
PNKP-218ENST00000625299 MRPS30Q9NP92 439 aaKnown RBP13.9□□□□□ -0.18
PNKP-218ENST00000625299 PCDHA3Q9Y5H8 950 aa13.9□□□□□ -0.18
PNKP-218ENST00000625299 MRFAP1Q9Y605 127 aa13.9□□□□□ -0.18
PNKP-218ENST00000625299 HEATR5BQ9P2D3 2071 aa13.89□□□□□ -0.19
PNKP-218ENST00000625299 PRMT5O14744 637 aaPredicted RBP13.89□□□□□ -0.19
PNKP-218ENST00000625299 FOXS1O43638 330 aa13.89□□□□□ -0.19
PNKP-218ENST00000625299 STATHP02808 62 aa13.89□□□□□ -0.19
PNKP-218ENST00000625299 CD46P15529 392 aa13.89□□□□□ -0.19
PNKP-218ENST00000625299 RPA3P35244 121 aaPredicted RBP13.89□□□□□ -0.19
PNKP-218ENST00000625299 CCNFP41002 786 aa13.89□□□□□ -0.19
PNKP-218ENST00000625299 ART1P52961 327 aa13.89□□□□□ -0.19
PNKP-218ENST00000625299 EMP3P54852 163 aa13.89□□□□□ -0.19
PNKP-218ENST00000625299 NAP1L1P55209 391 aaKnown RBP13.89□□□□□ -0.19
PNKP-218ENST00000625299 RWDD2BP57060 319 aa13.89□□□□□ -0.19
PNKP-218ENST00000625299 OC90Q02509 493 aaPredicted RBP13.89□□□□□ -0.19
PNKP-218ENST00000625299 AARS2Q5JTZ9 985 aaKnown RBP13.89□□□□□ -0.19
PNKP-218ENST00000625299 SPINK14Q6IE38 97 aa13.89□□□□□ -0.19
PNKP-218ENST00000625299 OTOAQ7RTW8 1153 aa13.89□□□□□ -0.19
PNKP-218ENST00000625299 ADCK2Q7Z695 626 aa13.89□□□□□ -0.19
PNKP-218ENST00000625299 CRLF3Q8IUI8 442 aa13.89□□□□□ -0.19
PNKP-218ENST00000625299 VSTM4Q8IW00 320 aa13.89□□□□□ -0.19
PNKP-218ENST00000625299 MDS2Q8NDY4 140 aa13.89□□□□□ -0.19
PNKP-218ENST00000625299 MAGEC3Q8TD91 643 aa13.89□□□□□ -0.19
PNKP-218ENST00000625299 FRMD6Q96NE9 622 aa13.89□□□□□ -0.19
PNKP-218ENST00000625299 PANX3Q96QZ0 392 aa13.89□□□□□ -0.19
PNKP-218ENST00000625299 PLCD4Q9BRC7 762 aa13.89□□□□□ -0.19
PNKP-218ENST00000625299 TMEM121Q9BTD3 319 aa13.89□□□□□ -0.19
PNKP-218ENST00000625299 VN1R1Q9GZP7 353 aa13.89□□□□□ -0.19
PNKP-218ENST00000625299 ENKD1Q9H0I2 346 aa13.89□□□□□ -0.19
PNKP-218ENST00000625299 CATSPERZQ9NTU4 200 aa13.89□□□□□ -0.19
PNKP-218ENST00000625299 ABCF3Q9NUQ8 709 aa13.89□□□□□ -0.19
PNKP-218ENST00000625299 SPATA7Q9P0W8 599 aa13.89□□□□□ -0.19
PNKP-218ENST00000625299 PPT2Q9UMR5 302 aa13.89□□□□□ -0.19
PNKP-218ENST00000625299 GOLGA6L9A6NEM1 432 aa13.88□□□□□ -0.19
PNKP-218ENST00000625299 TSPAN12O95859 305 aa13.88□□□□□ -0.19
PNKP-218ENST00000625299 CD96P40200 585 aa13.88□□□□□ -0.19
PNKP-218ENST00000625299 AVPR1BP47901 424 aa13.88□□□□□ -0.19
PNKP-218ENST00000625299 MEP1AQ16819 746 aa13.88□□□□□ -0.19
PNKP-218ENST00000625299 GARNL3Q5VVW2 1013 aa13.88□□□□□ -0.19
PNKP-218ENST00000625299 GALNTL5Q7Z4T8 443 aa13.88□□□□□ -0.19
PNKP-218ENST00000625299 CPEB2Q7Z5Q1 589 aaKnown RBP13.88□□□□□ -0.19
PNKP-218ENST00000625299 PNPLA5Q7Z6Z6 429 aaPredicted RBP13.88□□□□□ -0.19
PNKP-218ENST00000625299 PAQR7Q86WK9 346 aa13.88□□□□□ -0.19
PNKP-218ENST00000625299 CNGA4Q8IV77 575 aa13.88□□□□□ -0.19
PNKP-218ENST00000625299 GHDCQ8N2G8 530 aa13.88□□□□□ -0.19
PNKP-218ENST00000625299 TMEM178AQ8NBL3 297 aa13.88□□□□□ -0.19
PNKP-218ENST00000625299 FAM98AQ8NCA5 519 aaKnown RBP13.88□□□□□ -0.19
PNKP-218ENST00000625299 MRFAP1L1Q96HT8 127 aa13.88□□□□□ -0.19
PNKP-218ENST00000625299 COQ3Q9NZJ6 369 aa13.88□□□□□ -0.19
PNKP-218ENST00000625299 MARCH4Q9P2E8 410 aaPredicted RBP13.88□□□□□ -0.19
PNKP-218ENST00000625299 C19orf25Q9UFG5 118 aaPredicted RBP13.88□□□□□ -0.19
PNKP-218ENST00000625299 TAC3Q9UHF0 121 aa13.88□□□□□ -0.19
PNKP-218ENST00000625299 PCYOX1Q9UHG3 505 aa13.88□□□□□ -0.19
PNKP-218ENST00000625299 GNPTGQ9UJJ9 305 aa13.88□□□□□ -0.19
PNKP-218ENST00000625299 PCDHGB6Q9Y5F9 930 aa13.88□□□□□ -0.19
PNKP-218ENST00000625299 PCDHA13Q9Y5I0 950 aa13.88□□□□□ -0.19
PNKP-218ENST00000625299 SPG11Q96JI7 2443 aa13.88□□□□□ -0.19
PNKP-218ENST00000625299 ASPDHA6ND91 283 aa13.87□□□□□ -0.19
PNKP-218ENST00000625299 AKR1B15C9JRZ8 316 aaPredicted RBP13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms