RNA–Protein interactions for RNA: ENST00000625216.2

PNKP-217, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 629 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-217ENST00000625216 AOAHP28039 575 aa12.18□□□□□ -0.46
PNKP-217ENST00000625216 ALDH3A1P30838 453 aa12.18□□□□□ -0.46
PNKP-217ENST00000625216 POLE2P56282 527 aa12.18□□□□□ -0.46
PNKP-217ENST00000625216 RPS15P62841 145 aaKnown RBP12.18□□□□□ -0.46
PNKP-217ENST00000625216 HSPA14Q0VDF9 509 aa12.18□□□□□ -0.46
PNKP-217ENST00000625216 NFATC3Q12968 1075 aa12.18□□□□□ -0.46
PNKP-217ENST00000625216 KCNAB2Q13303 367 aa12.18□□□□□ -0.46
PNKP-217ENST00000625216 DNASE1L3Q13609 305 aa12.18□□□□□ -0.46
PNKP-217ENST00000625216 OR4D1Q15615 310 aa12.18□□□□□ -0.46
PNKP-217ENST00000625216 GPR19Q15760 415 aa12.18□□□□□ -0.46
PNKP-217ENST00000625216 FAM83EQ2M2I3 478 aa12.18□□□□□ -0.46
PNKP-217ENST00000625216 ACSBG2Q5FVE4 666 aa12.18□□□□□ -0.46
PNKP-217ENST00000625216 CES4AQ5XG92 561 aa12.18□□□□□ -0.46
PNKP-217ENST00000625216 SPESP1Q6UW49 350 aa12.18□□□□□ -0.46
PNKP-217ENST00000625216 ZNF517Q6ZMY9 492 aaPredicted RBP12.18□□□□□ -0.46
PNKP-217ENST00000625216 PIWIL4Q7Z3Z4 852 aaKnown RBP12.18□□□□□ -0.46
PNKP-217ENST00000625216 TMEM126BQ8IUX1 230 aa12.18□□□□□ -0.46
PNKP-217ENST00000625216 NKAPQ8N5F7 415 aaKnown RBP12.18□□□□□ -0.46
PNKP-217ENST00000625216 EEF1AKMT1Q8WVE0 214 aa12.18□□□□□ -0.46
PNKP-217ENST00000625216 INPP5DQ92835 1189 aa12.18□□□□□ -0.46
PNKP-217ENST00000625216 TCTN2Q96GX1 697 aa12.18□□□□□ -0.46
PNKP-217ENST00000625216 MAGEB18Q96M61 343 aa12.18□□□□□ -0.46
PNKP-217ENST00000625216 PPM1MQ96MI6 270 aa12.18□□□□□ -0.46
PNKP-217ENST00000625216 TWSG1Q9GZX9 223 aa12.18□□□□□ -0.46
PNKP-217ENST00000625216 MRPL46Q9H2W6 279 aaKnown RBP12.18□□□□□ -0.46
PNKP-217ENST00000625216 XKR8Q9H6D3 395 aa12.18□□□□□ -0.46
PNKP-217ENST00000625216 ALG9Q9H6U8 611 aa12.18□□□□□ -0.46
PNKP-217ENST00000625216 CPSF2Q9P2I0 782 aaKnown RBP12.18□□□□□ -0.46
PNKP-217ENST00000625216 COPG2Q9UBF2 871 aa12.18□□□□□ -0.46
PNKP-217ENST00000625216 ICKQ9UPZ9 632 aa12.18□□□□□ -0.46
PNKP-217ENST00000625216 CDC7O00311 574 aa12.17□□□□□ -0.46
PNKP-217ENST00000625216 CREG1O75629 220 aa12.17□□□□□ -0.46
PNKP-217ENST00000625216 SLCO2B1O94956 709 aa12.17□□□□□ -0.46
PNKP-217ENST00000625216 CHRM5P08912 532 aaPredicted RBP12.17□□□□□ -0.46
PNKP-217ENST00000625216 HBQ1P09105 142 aa12.17□□□□□ -0.46
PNKP-217ENST00000625216 CPA3P15088 417 aa12.17□□□□□ -0.46
PNKP-217ENST00000625216 ST6GAL1P15907 406 aa12.17□□□□□ -0.46
PNKP-217ENST00000625216 BGNP21810 368 aa12.17□□□□□ -0.46
PNKP-217ENST00000625216 SKIV2L2P42285 1042 aaKnown RBP12.17□□□□□ -0.46
PNKP-217ENST00000625216 KIR2DS3Q14952 304 aa12.17□□□□□ -0.46
PNKP-217ENST00000625216 ACAP2Q15057 778 aa12.17□□□□□ -0.46
PNKP-217ENST00000625216 DEFB109BQ30KR1 87 aa12.17□□□□□ -0.46
PNKP-217ENST00000625216 TTC23LQ6PF05 361 aa12.17□□□□□ -0.46
PNKP-217ENST00000625216 UNC5DQ6UXZ4 953 aa12.17□□□□□ -0.46
PNKP-217ENST00000625216 ZYG11AQ6WRX3 759 aa12.17□□□□□ -0.46
PNKP-217ENST00000625216 ISCA2Q86U28 154 aa12.17□□□□□ -0.46
PNKP-217ENST00000625216 RDH11Q8TC12 318 aa12.17□□□□□ -0.46
PNKP-217ENST00000625216 CT55Q8WUE5 264 aa12.17□□□□□ -0.46
PNKP-217ENST00000625216 SLC22A18Q96BI1 424 aa12.17□□□□□ -0.46
PNKP-217ENST00000625216 ATOH8Q96SQ7 321 aa12.17□□□□□ -0.46
PNKP-217ENST00000625216 MRPL57Q9BQC6 102 aaKnown RBP12.17□□□□□ -0.46
PNKP-217ENST00000625216 MID2Q9UJV3 735 aa12.17□□□□□ -0.46
PNKP-217ENST00000625216 CDYLQ9Y232 598 aa12.17□□□□□ -0.46
PNKP-217ENST00000625216 POLHQ9Y253 713 aa12.17□□□□□ -0.46
PNKP-217ENST00000625216 FARSAQ9Y285 508 aaKnown RBP12.17□□□□□ -0.46
PNKP-217ENST00000625216 TDRKHQ9Y2W6 561 aaKnown RBP12.17□□□□□ -0.46
PNKP-217ENST00000625216 MRPS18BQ9Y676 258 aaKnown RBP12.17□□□□□ -0.46
PNKP-217ENST00000625216 GCN1Q92616 2671 aaKnown RBP12.16□□□□□ -0.46
PNKP-217ENST00000625216 MEN1O00255 615 aa12.16□□□□□ -0.46
PNKP-217ENST00000625216 BIRC5O15392 142 aa12.16□□□□□ -0.46
PNKP-217ENST00000625216 DLX3O60479 287 aa12.16□□□□□ -0.46
PNKP-217ENST00000625216 RAB40ALP0C0E4 278 aa12.16□□□□□ -0.46
PNKP-217ENST00000625216 TPBGLP0DKB5 382 aa12.16□□□□□ -0.46
PNKP-217ENST00000625216 MYL2P10916 166 aa12.16□□□□□ -0.46
PNKP-217ENST00000625216 UGT2B7P16662 529 aa12.16□□□□□ -0.46
PNKP-217ENST00000625216 CYP2A7P20853 494 aa12.16□□□□□ -0.46
PNKP-217ENST00000625216 PTPN4P29074 926 aa12.16□□□□□ -0.46
PNKP-217ENST00000625216 KCNC1P48547 511 aa12.16□□□□□ -0.46
PNKP-217ENST00000625216 RAB28P51157 221 aa12.16□□□□□ -0.46
PNKP-217ENST00000625216 SEC24CP53992 1094 aa12.16□□□□□ -0.46
PNKP-217ENST00000625216 IL2P60568 153 aa12.16□□□□□ -0.46
PNKP-217ENST00000625216 ATP6V0D1P61421 351 aa12.16□□□□□ -0.46
PNKP-217ENST00000625216 ERV3-1Q14264 604 aa12.16□□□□□ -0.46
PNKP-217ENST00000625216 TSNQ15631 228 aaKnown RBP12.16□□□□□ -0.46
PNKP-217ENST00000625216 SLC5A12Q1EHB4 618 aa12.16□□□□□ -0.46
PNKP-217ENST00000625216 TTLL9Q3SXZ7 439 aa12.16□□□□□ -0.46
PNKP-217ENST00000625216 PLEKHS1Q5SXH7 462 aa12.16□□□□□ -0.46
PNKP-217ENST00000625216 KLC3Q6P597 504 aa12.16□□□□□ -0.46
PNKP-217ENST00000625216 RGS9BPQ6ZS82 235 aa12.16□□□□□ -0.46
PNKP-217ENST00000625216 ZCCHC23Q6ZST2 131 aa12.16□□□□□ -0.46
PNKP-217ENST00000625216 OTOAQ7RTW8 1153 aa12.16□□□□□ -0.46
PNKP-217ENST00000625216 SYVN1Q86TM6 617 aa12.16□□□□□ -0.46
PNKP-217ENST00000625216 VRK3Q8IV63 474 aa12.16□□□□□ -0.46
PNKP-217ENST00000625216 C10orf107Q8IVU9 208 aa12.16□□□□□ -0.46
PNKP-217ENST00000625216 DCUN1D3Q8IWE4 304 aa12.16□□□□□ -0.46
PNKP-217ENST00000625216 LRRC34Q8IZ02 419 aa12.16□□□□□ -0.46
PNKP-217ENST00000625216 OR1L3Q8NH93 324 aa12.16□□□□□ -0.46
PNKP-217ENST00000625216 THAP4Q8WY91 577 aa12.16□□□□□ -0.46
PNKP-217ENST00000625216 ZNF75CPQ92670 426 aaPredicted RBP12.16□□□□□ -0.46
PNKP-217ENST00000625216 EXT2Q93063 718 aa12.16□□□□□ -0.46
PNKP-217ENST00000625216 MR1Q95460 341 aa12.16□□□□□ -0.46
PNKP-217ENST00000625216 KIAA1191Q96A73 305 aa12.16□□□□□ -0.46
PNKP-217ENST00000625216 ZNF317Q96PQ6 595 aaPredicted RBP12.16□□□□□ -0.46
PNKP-217ENST00000625216 OR2A14Q96R47 310 aa12.16□□□□□ -0.46
PNKP-217ENST00000625216 DPH2Q9BQC3 489 aaPredicted RBP12.16□□□□□ -0.46
PNKP-217ENST00000625216 PSD3Q9NYI0 1048 aa12.16□□□□□ -0.46
PNKP-217ENST00000625216 KLHL42Q9P2K6 505 aa12.16□□□□□ -0.46
PNKP-217ENST00000625216 TLN1Q9Y490 2541 aaKnown RBP12.16□□□□□ -0.46
PNKP-217ENST00000625216 A0A0J9YY10 115 aa12.15□□□□□ -0.46
PNKP-217ENST00000625216 A8MT66 165 aa12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms