RNA–Protein interactions for RNA: ENST00000624009.3

LINC00963-217, long intergenic non-protein coding RNA 963, humanhuman

TSL 5 BASIC

Gene LINC00963, Length 663 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00963-217ENST00000624009 H0YGG7 62 aa11.88□□□□□ -0.51
LINC00963-217ENST00000624009 PRPF4O43172 522 aaKnown RBP eCLIP11.88□□□□□ -0.517e-7■■■□□ 18.3
LINC00963-217ENST00000624009 CTSBP07858 339 aa11.88□□□□□ -0.51
LINC00963-217ENST00000624009 CYC1P08574 325 aa11.88□□□□□ -0.51
LINC00963-217ENST00000624009 ITGAXP20702 1163 aa11.88□□□□□ -0.51
LINC00963-217ENST00000624009 ALAS2P22557 587 aa11.88□□□□□ -0.51
LINC00963-217ENST00000624009 SOX8P57073 446 aa11.88□□□□□ -0.51
LINC00963-217ENST00000624009 ARF3P61204 181 aaPredicted RBP11.88□□□□□ -0.51
LINC00963-217ENST00000624009 NAB1Q13506 487 aa11.88□□□□□ -0.51
LINC00963-217ENST00000624009 PHKG1Q16816 387 aa11.88□□□□□ -0.51
LINC00963-217ENST00000624009 THEMIS2Q5TEJ8 643 aa11.88□□□□□ -0.51
LINC00963-217ENST00000624009 PRAMEF13Q5VWM6 474 aa11.88□□□□□ -0.51
LINC00963-217ENST00000624009 FRMPD2BQ6IN97 320 aa11.88□□□□□ -0.51
LINC00963-217ENST00000624009 CAPN13Q6MZZ7 669 aaPredicted RBP11.88□□□□□ -0.51
LINC00963-217ENST00000624009 AGTRAPQ6RW13 159 aa11.88□□□□□ -0.51
LINC00963-217ENST00000624009 MRGPREQ86SM8 312 aa11.88□□□□□ -0.51
LINC00963-217ENST00000624009 C17orf53Q8N3J3 647 aaPredicted RBP11.88□□□□□ -0.51
LINC00963-217ENST00000624009 OR56A3Q8NH54 315 aa11.88□□□□□ -0.51
LINC00963-217ENST00000624009 FBXO25Q8TCJ0 367 aa11.88□□□□□ -0.51
LINC00963-217ENST00000624009 FBXL8Q96CD0 374 aa11.88□□□□□ -0.51
LINC00963-217ENST00000624009 RNF31Q96EP0 1072 aa11.88□□□□□ -0.51
LINC00963-217ENST00000624009 TSPAN17Q96FV3 270 aa11.88□□□□□ -0.51
LINC00963-217ENST00000624009 FER1L6-AS2Q96M78 137 aa11.88□□□□□ -0.51
LINC00963-217ENST00000624009 OLFM1Q99784 485 aa11.88□□□□□ -0.51
LINC00963-217ENST00000624009 DPH5Q9H2P9 285 aa11.88□□□□□ -0.51
LINC00963-217ENST00000624009 SAYSD1Q9NPB0 183 aa11.88□□□□□ -0.51
LINC00963-217ENST00000624009 ACSS2Q9NR19 701 aa11.88□□□□□ -0.51
LINC00963-217ENST00000624009 SLC22A11Q9NSA0 550 aa11.88□□□□□ -0.51
LINC00963-217ENST00000624009 TSR3Q9UJK0 312 aaKnown RBP11.88□□□□□ -0.51
LINC00963-217ENST00000624009 TLK1Q9UKI8 766 aa11.88□□□□□ -0.51
LINC00963-217ENST00000624009 ADAMTS6Q9UKP5 1117 aa11.88□□□□□ -0.51
LINC00963-217ENST00000624009 DOPEY2Q9Y3R5 2298 aa11.87□□□□□ -0.51
LINC00963-217ENST00000624009 LOC105369274A0A096LPK9 316 aa11.87□□□□□ -0.51
LINC00963-217ENST00000624009 LOC102723532A0A0G2JNH3 316 aa11.87□□□□□ -0.51
LINC00963-217ENST00000624009 FAM95CA0A1B0GW59 222 aa11.87□□□□□ -0.51
LINC00963-217ENST00000624009 TCRBV9S1A1TA0A576 114 aa11.87□□□□□ -0.51
LINC00963-217ENST00000624009 FAM159BA6NKW6 160 aa11.87□□□□□ -0.51
LINC00963-217ENST00000624009 VSTM2BA6NLU5 285 aa11.87□□□□□ -0.51
LINC00963-217ENST00000624009 J3QKU1 62 aa11.87□□□□□ -0.51
LINC00963-217ENST00000624009 MMP11P24347 488 aa11.87□□□□□ -0.51
LINC00963-217ENST00000624009 CASRP41180 1078 aa11.87□□□□□ -0.51
LINC00963-217ENST00000624009 HNMTP50135 292 aa11.87□□□□□ -0.51
LINC00963-217ENST00000624009 PLTPP55058 493 aa11.87□□□□□ -0.51
LINC00963-217ENST00000624009 NFKB2Q00653 900 aa11.87□□□□□ -0.51
LINC00963-217ENST00000624009 KLRB1Q12918 225 aa11.87□□□□□ -0.51
LINC00963-217ENST00000624009 DSG2Q14126 1118 aa11.87□□□□□ -0.51
LINC00963-217ENST00000624009 PPP1R3AQ16821 1122 aa11.87□□□□□ -0.51
LINC00963-217ENST00000624009 CDKL4Q5MAI5 379 aa11.87□□□□□ -0.51
LINC00963-217ENST00000624009 C1orf189Q5VU69 101 aa11.87□□□□□ -0.51
LINC00963-217ENST00000624009 MLIPQ5VWP3 458 aa11.87□□□□□ -0.51
LINC00963-217ENST00000624009 C8orf74Q6P047 294 aa11.87□□□□□ -0.51
LINC00963-217ENST00000624009 SBSNQ6UWP8 590 aa11.87□□□□□ -0.51
LINC00963-217ENST00000624009 C3orf62Q6ZUJ4 267 aa11.87□□□□□ -0.51
LINC00963-217ENST00000624009 ADAMTSL2Q86TH1 951 aa11.87□□□□□ -0.51
LINC00963-217ENST00000624009 C17orf64Q86WR6 236 aa11.87□□□□□ -0.51
LINC00963-217ENST00000624009 OR4N4Q8N0Y3 316 aa11.87□□□□□ -0.51
LINC00963-217ENST00000624009 ARHGEF39Q8N4T4 335 aa11.87□□□□□ -0.51
LINC00963-217ENST00000624009 CSNK1A1LQ8N752 337 aa11.87□□□□□ -0.51
LINC00963-217ENST00000624009 MNS1Q8NEH6 495 aa11.87□□□□□ -0.51
LINC00963-217ENST00000624009 ABHD11Q8NFV4 315 aa11.87□□□□□ -0.51
LINC00963-217ENST00000624009 C10orf90Q96M02 699 aa11.87□□□□□ -0.51
LINC00963-217ENST00000624009 C16orf45Q96MC5 204 aaPredicted RBP11.87□□□□□ -0.51
LINC00963-217ENST00000624009 SPSB2Q99619 263 aa11.87□□□□□ -0.51
LINC00963-217ENST00000624009 TSPYL1Q9H0U9 437 aa11.87□□□□□ -0.51
LINC00963-217ENST00000624009 ZNF304Q9HCX3 659 aa11.87□□□□□ -0.51
LINC00963-217ENST00000624009 SEMA3GQ9NS98 782 aa11.87□□□□□ -0.51
LINC00963-217ENST00000624009 ARL15Q9NXU5 204 aa11.87□□□□□ -0.51
LINC00963-217ENST00000624009 TXNDC16Q9P2K2 825 aa11.87□□□□□ -0.51
LINC00963-217ENST00000624009 SLC17A6Q9P2U8 582 aa11.87□□□□□ -0.51
LINC00963-217ENST00000624009 PTRH2Q9Y3E5 179 aaKnown RBP11.87□□□□□ -0.51
LINC00963-217ENST00000624009 SHANK1Q9Y566 2161 aa11.86□□□□□ -0.51
LINC00963-217ENST00000624009 USP9YO00507 2555 aaPredicted RBP11.86□□□□□ -0.51
LINC00963-217ENST00000624009 CCDC189A1A4V9 331 aa11.86□□□□□ -0.51
LINC00963-217ENST00000624009 PEX12O00623 359 aa11.86□□□□□ -0.51
LINC00963-217ENST00000624009 CNOT3O75175 753 aaKnown RBP11.86□□□□□ -0.51
LINC00963-217ENST00000624009 WISP3O95389 354 aaPredicted RBP11.86□□□□□ -0.51
LINC00963-217ENST00000624009 C1QAP02745 245 aa11.86□□□□□ -0.51
LINC00963-217ENST00000624009 UMODP07911 640 aa11.86□□□□□ -0.51
LINC00963-217ENST00000624009 SSTR1P30872 391 aa11.86□□□□□ -0.51
LINC00963-217ENST00000624009 STX2P32856 288 aa11.86□□□□□ -0.51
LINC00963-217ENST00000624009 GRK3P35626 688 aa11.86□□□□□ -0.51
LINC00963-217ENST00000624009 GP5P40197 560 aa11.86□□□□□ -0.51
LINC00963-217ENST00000624009 YBX1P67809 324 aaKnown RBP11.86□□□□□ -0.51
LINC00963-217ENST00000624009 GUCY2DQ02846 1103 aa11.86□□□□□ -0.51
LINC00963-217ENST00000624009 TSTA3Q13630 321 aaPredicted RBP11.86□□□□□ -0.51
LINC00963-217ENST00000624009 NKG7Q16617 165 aa11.86□□□□□ -0.51
LINC00963-217ENST00000624009 NDUFA9Q16795 377 aa11.86□□□□□ -0.51
LINC00963-217ENST00000624009 GLE1Q53GS7 698 aaKnown RBP11.86□□□□□ -0.51
LINC00963-217ENST00000624009 DCAF10Q5QP82 559 aa11.86□□□□□ -0.51
LINC00963-217ENST00000624009 NIPAL1Q6NVV3 410 aa11.86□□□□□ -0.51
LINC00963-217ENST00000624009 ZDHHC24Q6UX98 284 aa11.86□□□□□ -0.51
LINC00963-217ENST00000624009 COX15Q7KZN9 410 aa11.86□□□□□ -0.51
LINC00963-217ENST00000624009 CCDC91Q7Z6B0 441 aa11.86□□□□□ -0.51
LINC00963-217ENST00000624009 RELL1Q8IUW5 271 aa11.86□□□□□ -0.51
LINC00963-217ENST00000624009 MMGT1Q8N4V1 131 aa11.86□□□□□ -0.51
LINC00963-217ENST00000624009 PPFIBP2Q8ND30 876 aa11.86□□□□□ -0.51
LINC00963-217ENST00000624009 OR4K1Q8NGD4 311 aa11.86□□□□□ -0.51
LINC00963-217ENST00000624009 GPR22Q99680 433 aa11.86□□□□□ -0.51
LINC00963-217ENST00000624009 RBBP8Q99708 897 aa11.86□□□□□ -0.51
LINC00963-217ENST00000624009 SLC25A23Q9BV35 468 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms