RNA–Protein interactions for RNA: ENST00000622045.4

SYNRG-231, Transcript of synergin gamma, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNRG, Length 3,859 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNRG-231ENST00000622045 CXCR4P61073 352 aa13.97□□□□□ -0.17
SYNRG-231ENST00000622045 PTCHD3Q3KNS1 767 aa13.97□□□□□ -0.17
SYNRG-231ENST00000622045 KDM4DQ6B0I6 523 aa13.97□□□□□ -0.17
SYNRG-231ENST00000622045 CD300LGQ6UXG3 332 aa13.97□□□□□ -0.17
SYNRG-231ENST00000622045 CHAC2Q8WUX2 184 aa13.97□□□□□ -0.17
SYNRG-231ENST00000622045 TPD52L3Q96J77 140 aa13.97□□□□□ -0.17
SYNRG-231ENST00000622045 TSSK3Q96PN8 268 aa13.97□□□□□ -0.17
SYNRG-231ENST00000622045 PARK7Q99497 189 aaKnown RBP13.97□□□□□ -0.17
SYNRG-231ENST00000622045 RAD18Q9NS91 495 aa13.97□□□□□ -0.17
SYNRG-231ENST00000622045 MKLN1Q9UL63 735 aa13.97□□□□□ -0.17
SYNRG-231ENST00000622045 SATB2Q9UPW6 733 aa13.97□□□□□ -0.17
SYNRG-231ENST00000622045 CAPN5O15484 640 aaPredicted RBP13.97□□□□□ -0.17
SYNRG-231ENST00000622045 SOX6P35712 828 aa13.97□□□□□ -0.17
SYNRG-231ENST00000622045 DDOSTP39656 456 aa13.97□□□□□ -0.17
SYNRG-231ENST00000622045 RFX2P48378 723 aa13.97□□□□□ -0.17
SYNRG-231ENST00000622045 RPS24P62847 133 aaKnown RBP13.97□□□□□ -0.17
SYNRG-231ENST00000622045 VLDLRP98155 873 aa13.97□□□□□ -0.17
SYNRG-231ENST00000622045 MED22Q15528 200 aa13.97□□□□□ -0.17
SYNRG-231ENST00000622045 GDF6Q6KF10 455 aaPredicted RBP13.97□□□□□ -0.17
SYNRG-231ENST00000622045 TMEM132CQ8N3T6 1108 aa13.97□□□□□ -0.17
SYNRG-231ENST00000622045 PIK3R3Q92569 461 aa13.97□□□□□ -0.17
SYNRG-231ENST00000622045 RERGLQ9H628 205 aa13.97□□□□□ -0.17
SYNRG-231ENST00000622045 STMN3Q9NZ72 180 aa13.97□□□□□ -0.17
SYNRG-231ENST00000622045 AFF4Q9UHB7 1163 aaKnown RBP13.97□□□□□ -0.17
SYNRG-231ENST00000622045 GABRQQ9UN88 632 aa13.97□□□□□ -0.17
SYNRG-231ENST00000622045 DRGXA6NNA5 263 aa13.96□□□□□ -0.17
SYNRG-231ENST00000622045 ANKRD66B4E2M5 251 aa13.96□□□□□ -0.17
SYNRG-231ENST00000622045 SCO1O75880 301 aa13.96□□□□□ -0.17
SYNRG-231ENST00000622045 PTGER3P43115 390 aa13.96□□□□□ -0.17
SYNRG-231ENST00000622045 ELP6Q0PNE2 266 aa13.96□□□□□ -0.17
SYNRG-231ENST00000622045 NPRL3Q12980 569 aa13.96□□□□□ -0.17
SYNRG-231ENST00000622045 ARHGEF7Q14155 803 aa13.96□□□□□ -0.17
SYNRG-231ENST00000622045 DMC1Q14565 340 aa13.96□□□□□ -0.17
SYNRG-231ENST00000622045 BAK1Q16611 211 aa13.96□□□□□ -0.17
SYNRG-231ENST00000622045 RUNDC3AQ59EK9 446 aa13.96□□□□□ -0.17
SYNRG-231ENST00000622045 PAMR1Q6UXH9 720 aa13.96□□□□□ -0.17
SYNRG-231ENST00000622045 TSPYL5Q86VY4 417 aaPredicted RBP13.96□□□□□ -0.17
SYNRG-231ENST00000622045 PSKH2Q96QS6 385 aa13.96□□□□□ -0.17
SYNRG-231ENST00000622045 TRIB3Q96RU7 358 aa13.96□□□□□ -0.17
SYNRG-231ENST00000622045 CCSER2Q9H7U1 834 aa13.96□□□□□ -0.17
SYNRG-231ENST00000622045 MAT2BQ9NZL9 334 aa13.96□□□□□ -0.17
SYNRG-231ENST00000622045 MOXD2PA6NHM9 499 aa13.96□□□□□ -0.17
SYNRG-231ENST00000622045 FAM25AB3EWG3 89 aa13.96□□□□□ -0.17
SYNRG-231ENST00000622045 FAM25CB3EWG5 89 aa13.96□□□□□ -0.17
SYNRG-231ENST00000622045 FAM25GB3EWG6 89 aa13.96□□□□□ -0.17
SYNRG-231ENST00000622045 SLC28A1O00337 649 aa13.96□□□□□ -0.17
SYNRG-231ENST00000622045 YES1P07947 543 aa13.96□□□□□ -0.17
SYNRG-231ENST00000622045 COL6A1P12109 1028 aa13.96□□□□□ -0.17
SYNRG-231ENST00000622045 TYMPP19971 482 aa13.96□□□□□ -0.17
SYNRG-231ENST00000622045 HNF4AP41235 474 aa13.96□□□□□ -0.17
SYNRG-231ENST00000622045 MAP2K5Q13163 448 aa13.96□□□□□ -0.17
SYNRG-231ENST00000622045 RGL4Q8IZJ4 473 aa13.96□□□□□ -0.17
SYNRG-231ENST00000622045 SPERTQ8NA61 448 aa13.96□□□□□ -0.17
SYNRG-231ENST00000622045 UTP15Q8TED0 518 aaKnown RBP13.96□□□□□ -0.17
SYNRG-231ENST00000622045 IPCEF1Q8WWN9 437 aaPredicted RBP13.96□□□□□ -0.17
SYNRG-231ENST00000622045 FAM126AQ9BYI3 521 aaPredicted RBP13.96□□□□□ -0.17
SYNRG-231ENST00000622045 TM9SF3Q9HD45 589 aa13.96□□□□□ -0.17
SYNRG-231ENST00000622045 TMEM39AQ9NV64 488 aa13.96□□□□□ -0.17
SYNRG-231ENST00000622045 H3BM21 787 aa13.96□□□□□ -0.18
SYNRG-231ENST00000622045 ARHGAP33O14559 1287 aa13.96□□□□□ -0.18
SYNRG-231ENST00000622045 TEX28O15482 410 aa13.96□□□□□ -0.18
SYNRG-231ENST00000622045 AKR7A2O43488 359 aa13.96□□□□□ -0.18
SYNRG-231ENST00000622045 TSC22D2O75157 780 aa13.96□□□□□ -0.18
SYNRG-231ENST00000622045 DGKEP52429 567 aa13.96□□□□□ -0.18
SYNRG-231ENST00000622045 SMARCB1Q12824 385 aa13.96□□□□□ -0.18
SYNRG-231ENST00000622045 FAM110CQ1W6H9 321 aa13.96□□□□□ -0.18
SYNRG-231ENST00000622045 CTXN3Q4LDR2 81 aa13.96□□□□□ -0.18
SYNRG-231ENST00000622045 NLRP8Q86W28 1048 aa13.96□□□□□ -0.18
SYNRG-231ENST00000622045 CLDN19Q8N6F1 224 aa13.96□□□□□ -0.18
SYNRG-231ENST00000622045 CDC26Q8NHZ8 85 aa13.96□□□□□ -0.18
SYNRG-231ENST00000622045 GPR151Q8TDV0 419 aa13.96□□□□□ -0.18
SYNRG-231ENST00000622045 SKA2Q8WVK7 121 aaPredicted RBP13.96□□□□□ -0.18
SYNRG-231ENST00000622045 GGHQ92820 318 aa13.96□□□□□ -0.18
SYNRG-231ENST00000622045 CNPPD1Q9BV87 410 aa13.96□□□□□ -0.18
SYNRG-231ENST00000622045 OLA1Q9NTK5 396 aaKnown RBP13.96□□□□□ -0.18
SYNRG-231ENST00000622045 DNMT3LQ9UJW3 386 aa13.96□□□□□ -0.18
SYNRG-231ENST00000622045 NOD1Q9Y239 953 aa13.96□□□□□ -0.18
SYNRG-231ENST00000622045 ARIH1Q9Y4X5 557 aaPredicted RBP13.96□□□□□ -0.18
SYNRG-231ENST00000622045 ZFP37Q9Y6Q3 630 aaPredicted RBP13.96□□□□□ -0.18
SYNRG-231ENST00000622045 A0A0U1RQF3 1178 aa13.95□□□□□ -0.18
SYNRG-231ENST00000622045 RETP07949 1114 aa13.95□□□□□ -0.18
SYNRG-231ENST00000622045 CTPS1P17812 591 aa13.95□□□□□ -0.18
SYNRG-231ENST00000622045 EFNA1P20827 205 aaPredicted RBP13.95□□□□□ -0.18
SYNRG-231ENST00000622045 OR3A3P47888 321 aa13.95□□□□□ -0.18
SYNRG-231ENST00000622045 SLC14A1Q13336 389 aa13.95□□□□□ -0.18
SYNRG-231ENST00000622045 KIAA0040Q15053 153 aa13.95□□□□□ -0.18
SYNRG-231ENST00000622045 PCBP2Q15366 365 aaKnown RBP eCLIP13.95□□□□□ -0.18
SYNRG-231ENST00000622045 TSTQ16762 297 aaKnown RBP13.95□□□□□ -0.18
SYNRG-231ENST00000622045 PROX2Q3B8N5 592 aa13.95□□□□□ -0.18
SYNRG-231ENST00000622045 LDLRAD1Q5T700 205 aa13.95□□□□□ -0.18
SYNRG-231ENST00000622045 DOK6Q6PKX4 331 aa13.95□□□□□ -0.18
SYNRG-231ENST00000622045 LINGO4Q6UY18 593 aa13.95□□□□□ -0.18
SYNRG-231ENST00000622045 SNX20Q7Z614 316 aa13.95□□□□□ -0.18
SYNRG-231ENST00000622045 VANGL1Q8TAA9 524 aaPredicted RBP13.95□□□□□ -0.18
SYNRG-231ENST00000622045 MGME1Q9BQP7 344 aa13.95□□□□□ -0.18
SYNRG-231ENST00000622045 PCDHB9Q9Y5E1 797 aa13.95□□□□□ -0.18
SYNRG-231ENST00000622045 LOC730098B7Z3J9 87 aa13.95□□□□□ -0.18
SYNRG-231ENST00000622045 AQP1P29972 269 aa13.95□□□□□ -0.18
SYNRG-231ENST00000622045 FAM151BQ6UXP7 276 aa13.95□□□□□ -0.18
SYNRG-231ENST00000622045 MRPL10Q7Z7H8 261 aaKnown RBP13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms