RNA–Protein interactions for RNA: ENST00000621269.4

ATXN3-253, Transcript of ataxin 3, humanhuman

TSL 5 BASIC

Gene ATXN3, Length 936 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-253ENST00000621269 KCNMB4Q86W47 210 aa22.86■■□□□ 1.25
ATXN3-253ENST00000621269 OR2A5Q96R48 311 aa22.86■■□□□ 1.25
ATXN3-253ENST00000621269 AARSD1Q9BTE6 412 aaKnown RBP22.86■■□□□ 1.25
ATXN3-253ENST00000621269 EPS8L2Q9H6S3 715 aa22.86■■□□□ 1.25
ATXN3-253ENST00000621269 CUEDC1Q9NWM3 386 aaPredicted RBP22.86■■□□□ 1.25
ATXN3-253ENST00000621269 TRMT6Q9UJA5 497 aaKnown RBP22.86■■□□□ 1.25
ATXN3-253ENST00000621269 PTPN13Q12923 2485 aa22.86■■□□□ 1.25
ATXN3-253ENST00000621269 IGLV3-12A0A075B6K2 115 aa22.85■■□□□ 1.25
ATXN3-253ENST00000621269 EIF3FO00303 357 aaPredicted RBP22.85■■□□□ 1.25
ATXN3-253ENST00000621269 SEMA7AO75326 666 aa22.85■■□□□ 1.25
ATXN3-253ENST00000621269 HPP00738 406 aa22.85■■□□□ 1.25
ATXN3-253ENST00000621269 SKIV2L2P42285 1042 aaKnown RBP22.85■■□□□ 1.25
ATXN3-253ENST00000621269 RNASEH2BQ5TBB1 312 aaKnown RBP22.85■■□□□ 1.25
ATXN3-253ENST00000621269 LRRC8EQ6NSJ5 796 aa22.85■■□□□ 1.25
ATXN3-253ENST00000621269 PIWIL4Q7Z3Z4 852 aaKnown RBP22.85■■□□□ 1.25
ATXN3-253ENST00000621269 CUZD1Q86UP6 607 aa22.85■■□□□ 1.25
ATXN3-253ENST00000621269 DNAJB14Q8TBM8 379 aa22.85■■□□□ 1.25
ATXN3-253ENST00000621269 PPP4R1Q8TF05 950 aa22.85■■□□□ 1.25
ATXN3-253ENST00000621269 MMABQ96EY8 250 aaPredicted RBP22.85■■□□□ 1.25
ATXN3-253ENST00000621269 ZNF160Q9HCG1 818 aa22.85■■□□□ 1.25
ATXN3-253ENST00000621269 ASIC3Q9UHC3 531 aa22.85■■□□□ 1.25
ATXN3-253ENST00000621269 SNX12Q9UMY4 172 aa22.85■■□□□ 1.25
ATXN3-253ENST00000621269 PCDHGA10Q9Y5H3 936 aa22.85■■□□□ 1.25
ATXN3-253ENST00000621269 CES2O00748 559 aa22.84■■□□□ 1.25
ATXN3-253ENST00000621269 CXCR2P25025 360 aa22.84■■□□□ 1.25
ATXN3-253ENST00000621269 EMP2P54851 167 aa22.84■■□□□ 1.25
ATXN3-253ENST00000621269 ELOAQ14241 798 aaKnown RBP22.84■■□□□ 1.25
ATXN3-253ENST00000621269 ATG9BQ674R7 924 aa22.84■■□□□ 1.25
ATXN3-253ENST00000621269 IGFL2Q6UWQ7 119 aa22.84■■□□□ 1.25
ATXN3-253ENST00000621269 PCGF5Q86SE9 256 aa22.84■■□□□ 1.25
ATXN3-253ENST00000621269 LAPTM4BQ86VI4 370 aa22.84■■□□□ 1.25
ATXN3-253ENST00000621269 SPNS2Q8IVW8 549 aa22.84■■□□□ 1.25
ATXN3-253ENST00000621269 PALM2Q8IXS6 379 aa22.84■■□□□ 1.25
ATXN3-253ENST00000621269 LRRC56Q8IYG6 542 aaPredicted RBP22.84■■□□□ 1.25
ATXN3-253ENST00000621269 MCOLN3Q8TDD5 553 aa22.84■■□□□ 1.25
ATXN3-253ENST00000621269 C8orf44Q96CB5 159 aa22.84■■□□□ 1.25
ATXN3-253ENST00000621269 DRC3Q9H069 523 aa22.84■■□□□ 1.25
ATXN3-253ENST00000621269 C14orf105Q9NVL8 296 aa22.84■■□□□ 1.25
ATXN3-253ENST00000621269 NUP210LQ5VU65 1888 aa22.83■■□□□ 1.25
ATXN3-253ENST00000621269 DOPEY2Q9Y3R5 2298 aa22.83■■□□□ 1.25
ATXN3-253ENST00000621269 H7BY64 318 aa22.83■■□□□ 1.25
ATXN3-253ENST00000621269 HAT1O14929 419 aa22.83■■□□□ 1.25
ATXN3-253ENST00000621269 CBX6O95503 412 aa22.83■■□□□ 1.25
ATXN3-253ENST00000621269 TTC4O95801 387 aa22.83■■□□□ 1.25
ATXN3-253ENST00000621269 HRH2P25021 359 aa22.83■■□□□ 1.25
ATXN3-253ENST00000621269 IMPA1P29218 277 aa22.83■■□□□ 1.25
ATXN3-253ENST00000621269 SLC26A3P40879 764 aa22.83■■□□□ 1.25
ATXN3-253ENST00000621269 RGS4P49798 205 aa22.83■■□□□ 1.25
ATXN3-253ENST00000621269 Q0VFX4 171 aa22.83■■□□□ 1.25
ATXN3-253ENST00000621269 CRYMQ14894 314 aa22.83■■□□□ 1.25
ATXN3-253ENST00000621269 NDUFA9Q16795 377 aa22.83■■□□□ 1.25
ATXN3-253ENST00000621269 CRB2Q5IJ48 1285 aa22.83■■□□□ 1.25
ATXN3-253ENST00000621269 NDUFAF7Q7L592 441 aa22.83■■□□□ 1.25
ATXN3-253ENST00000621269 KBTBD2Q8IY47 623 aa22.83■■□□□ 1.25
ATXN3-253ENST00000621269 C2CD4AQ8NCU7 369 aaPredicted RBP22.83■■□□□ 1.25
ATXN3-253ENST00000621269 CNDP1Q96KN2 507 aa22.83■■□□□ 1.25
ATXN3-253ENST00000621269 PRAP1Q96NZ9 151 aa22.83■■□□□ 1.25
ATXN3-253ENST00000621269 NDNQ99608 321 aa22.83■■□□□ 1.25
ATXN3-253ENST00000621269 MESP1Q9BRJ9 268 aa22.83■■□□□ 1.25
ATXN3-253ENST00000621269 SYNPO2LQ9H987 977 aa22.83■■□□□ 1.25
ATXN3-253ENST00000621269 MKKSQ9NPJ1 570 aaPredicted RBP22.83■■□□□ 1.25
ATXN3-253ENST00000621269 CCDC177Q9NQR7 707 aaPredicted RBP22.83■■□□□ 1.25
ATXN3-253ENST00000621269 AGPAT4Q9NRZ5 378 aa22.83■■□□□ 1.25
ATXN3-253ENST00000621269 TAS2R13Q9NYV9 303 aa22.83■■□□□ 1.25
ATXN3-253ENST00000621269 NOVA2Q9UNW9 492 aaKnown RBP22.83■■□□□ 1.25
ATXN3-253ENST00000621269 CSAG2Q9Y5P2 127 aa22.83■■□□□ 1.25
ATXN3-253ENST00000621269 A0A0A6YYC8 382 aaPredicted RBP22.82■■□□□ 1.24
ATXN3-253ENST00000621269 NSG1A0A0A6YYJ2 146 aa22.82■■□□□ 1.24
ATXN3-253ENST00000621269 IDSB3KWA1 339 aa22.82■■□□□ 1.24
ATXN3-253ENST00000621269 I3L1I5 382 aaPredicted RBP22.82■■□□□ 1.24
ATXN3-253ENST00000621269 DNALI1O14645 258 aaPredicted RBP22.82■■□□□ 1.24
ATXN3-253ENST00000621269 FFAR3O14843 346 aa22.82■■□□□ 1.24
ATXN3-253ENST00000621269 GPR42O15529 346 aa22.82■■□□□ 1.24
ATXN3-253ENST00000621269 HEXBP07686 556 aa22.82■■□□□ 1.24
ATXN3-253ENST00000621269 ISLR2Q6UXK2 745 aa22.82■■□□□ 1.24
ATXN3-253ENST00000621269 PLD3Q8IV08 490 aa22.82■■□□□ 1.24
ATXN3-253ENST00000621269 EEF1AKMT1Q8WVE0 214 aa22.82■■□□□ 1.24
ATXN3-253ENST00000621269 CCDC138Q96M89 665 aa22.82■■□□□ 1.24
ATXN3-253ENST00000621269 NAT9Q9BTE0 207 aa22.82■■□□□ 1.24
ATXN3-253ENST00000621269 PCBD2Q9H0N5 130 aa22.82■■□□□ 1.24
ATXN3-253ENST00000621269 TMEM184CQ9NVA4 438 aa22.82■■□□□ 1.24
ATXN3-253ENST00000621269 LRRK2Q5S007 2527 aa22.82■■□□□ 1.24
ATXN3-253ENST00000621269 PCM1Q15154 2024 aa22.81■■□□□ 1.24
ATXN3-253ENST00000621269 ANKUB1A6NFN9 424 aa22.81■■□□□ 1.24
ATXN3-253ENST00000621269 DDAH2O95865 285 aa22.81■■□□□ 1.24
ATXN3-253ENST00000621269 C8GP07360 202 aa22.81■■□□□ 1.24
ATXN3-253ENST00000621269 AVPR1BP47901 424 aa22.81■■□□□ 1.24
ATXN3-253ENST00000621269 DHX9Q08211 1270 aaKnown RBP22.81■■□□□ 1.24
ATXN3-253ENST00000621269 SPANXN3Q5MJ09 141 aa22.81■■□□□ 1.24
ATXN3-253ENST00000621269 LINC00696Q6ZRV3 163 aa22.81■■□□□ 1.24
ATXN3-253ENST00000621269 AMER3Q8N944 861 aa22.81■■□□□ 1.24
ATXN3-253ENST00000621269 LMF1Q96S06 567 aa22.81■■□□□ 1.24
ATXN3-253ENST00000621269 TGIF2Q9GZN2 237 aa22.81■■□□□ 1.24
ATXN3-253ENST00000621269 DDX47Q9H0S4 455 aaKnown RBP22.81■■□□□ 1.24
ATXN3-253ENST00000621269 TRMT1Q9NXH9 659 aaKnown RBP22.81■■□□□ 1.24
ATXN3-253ENST00000621269 PLEKHB1Q9UF11 243 aaPredicted RBP22.81■■□□□ 1.24
ATXN3-253ENST00000621269 SHANK1Q9Y566 2161 aa22.8■■□□□ 1.24
ATXN3-253ENST00000621269 PCDH17O14917 1159 aa22.8■■□□□ 1.24
ATXN3-253ENST00000621269 FOXS1O43638 330 aa22.8■■□□□ 1.24
ATXN3-253ENST00000621269 TBPL1P62380 186 aa22.8■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms