RNA–Protein interactions for RNA: ENST00000620864.1

COLCA1-205, Transcript of colorectal cancer associated 1, humanhuman

TSL 1 (best) BASIC

Gene COLCA1, Length 8,098 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA1-205ENST00000620864 VARSP26640 1264 aaKnown RBP7□□□□□ -1.29
COLCA1-205ENST00000620864 ZNF132P52740 706 aa7□□□□□ -1.29
COLCA1-205ENST00000620864 PPP4CP60510 307 aa7□□□□□ -1.29
COLCA1-205ENST00000620864 ARL6IP1Q15041 203 aa7□□□□□ -1.29
COLCA1-205ENST00000620864 MED27Q6P2C8 311 aa7□□□□□ -1.29
COLCA1-205ENST00000620864 GOLM1Q8NBJ4 401 aa7□□□□□ -1.29
COLCA1-205ENST00000620864 HAVCR2Q8TDQ0 301 aa7□□□□□ -1.29
COLCA1-205ENST00000620864 TRAPPC12Q8WVT3 735 aa7□□□□□ -1.29
COLCA1-205ENST00000620864 SLC41A3Q96GZ6 507 aa7□□□□□ -1.29
COLCA1-205ENST00000620864 ZBED3Q96IU2 234 aaPredicted RBP7□□□□□ -1.29
COLCA1-205ENST00000620864 HAPLN3Q96S86 360 aa7□□□□□ -1.29
COLCA1-205ENST00000620864 C11orf16Q9NQ32 467 aa7□□□□□ -1.29
COLCA1-205ENST00000620864 TAS2R9Q9NYW1 312 aa7□□□□□ -1.29
COLCA1-205ENST00000620864 SRRDQ9UH36 339 aa7□□□□□ -1.29
COLCA1-205ENST00000620864 PCDHGA8Q9Y5G5 932 aa7□□□□□ -1.29
COLCA1-205ENST00000620864 TLR4O00206 839 aa7□□□□□ -1.29
COLCA1-205ENST00000620864 SCAMP3O14828 347 aaKnown RBP7□□□□□ -1.29
COLCA1-205ENST00000620864 ERAL1O75616 437 aaKnown RBP7□□□□□ -1.29
COLCA1-205ENST00000620864 SLC34A2O95436 690 aa7□□□□□ -1.29
COLCA1-205ENST00000620864 SMIM10L2AP0DMW4 78 aa7□□□□□ -1.29
COLCA1-205ENST00000620864 SMIM10L2BP0DMW5 78 aa7□□□□□ -1.29
COLCA1-205ENST00000620864 HNRNPLP14866 589 aaKnown RBP eCLIP7□□□□□ -1.29
COLCA1-205ENST00000620864 ALAS2P22557 587 aa7□□□□□ -1.29
COLCA1-205ENST00000620864 CD6P30203 668 aa7□□□□□ -1.29
COLCA1-205ENST00000620864 CREB5Q02930 508 aa7□□□□□ -1.29
COLCA1-205ENST00000620864 LAMTOR4Q0VGL1 99 aa7□□□□□ -1.29
COLCA1-205ENST00000620864 CPSF6Q16630 551 aaKnown RBP eCLIP7□□□□□ -1.29
COLCA1-205ENST00000620864 ANKDD1AQ495B1 522 aa7□□□□□ -1.29
COLCA1-205ENST00000620864 SH3PXD2AQ5TCZ1 1133 aa7□□□□□ -1.29
COLCA1-205ENST00000620864 RAET1GQ6H3X3 334 aa7□□□□□ -1.29
COLCA1-205ENST00000620864 PAOXQ6QHF9 649 aa7□□□□□ -1.29
COLCA1-205ENST00000620864 CES3Q6UWW8 571 aa7□□□□□ -1.29
COLCA1-205ENST00000620864 ZNF550Q7Z398 422 aa7□□□□□ -1.29
COLCA1-205ENST00000620864 EPS8L1Q8TE68 723 aa7□□□□□ -1.29
COLCA1-205ENST00000620864 STYXQ8WUJ0 223 aa7□□□□□ -1.29
COLCA1-205ENST00000620864 CNTNAP3BQ96NU0 1288 aa7□□□□□ -1.29
COLCA1-205ENST00000620864 ENAMQ9NRM1 1142 aa7□□□□□ -1.29
COLCA1-205ENST00000620864 ZIM2Q9NZV7 527 aa7□□□□□ -1.29
COLCA1-205ENST00000620864 SLC37A4O43826 429 aa7□□□□□ -1.29
COLCA1-205ENST00000620864 SH3BGRLO75368 114 aa7□□□□□ -1.29
COLCA1-205ENST00000620864 SCGB1D2O95969 90 aa7□□□□□ -1.29
COLCA1-205ENST00000620864 MT-ND5P03915 603 aa7□□□□□ -1.29
COLCA1-205ENST00000620864 ERCC1P07992 297 aaPredicted RBP7□□□□□ -1.29
COLCA1-205ENST00000620864 ANTXR2P58335 489 aa7□□□□□ -1.29
COLCA1-205ENST00000620864 ACTC1P68032 377 aa7□□□□□ -1.29
COLCA1-205ENST00000620864 ACTA1P68133 377 aa7□□□□□ -1.29
COLCA1-205ENST00000620864 MRPS6P82932 125 aaKnown RBP7□□□□□ -1.29
COLCA1-205ENST00000620864 PTCHD3Q3KNS1 767 aa7□□□□□ -1.29
COLCA1-205ENST00000620864 MAP4K3Q8IVH8 894 aa7□□□□□ -1.29
COLCA1-205ENST00000620864 SPATA6LQ8N4H0 392 aa7□□□□□ -1.29
COLCA1-205ENST00000620864 ZNF366Q8N895 744 aa7□□□□□ -1.29
COLCA1-205ENST00000620864 OSTF1Q92882 214 aa7□□□□□ -1.29
COLCA1-205ENST00000620864 SH2B3Q9UQQ2 575 aa7□□□□□ -1.29
COLCA1-205ENST00000620864 ZNF175Q9Y473 711 aa7□□□□□ -1.29
COLCA1-205ENST00000620864 HSPE1-MOB4S4R3N1 261 aa7□□□□□ -1.29
COLCA1-205ENST00000620864 FAM237AA0A1B0GTK4 181 aa7□□□□□ -1.29
COLCA1-205ENST00000620864 EME2A4GXA9 379 aaPredicted RBP7□□□□□ -1.29
COLCA1-205ENST00000620864 TVP23AA6NH52 213 aa7□□□□□ -1.29
COLCA1-205ENST00000620864 CCL16O15467 120 aa7□□□□□ -1.29
COLCA1-205ENST00000620864 PRAF2O60831 178 aa7□□□□□ -1.29
COLCA1-205ENST00000620864 TSPAN15O95858 294 aa7□□□□□ -1.29
COLCA1-205ENST00000620864 CPN2P22792 545 aa7□□□□□ -1.29
COLCA1-205ENST00000620864 PARP15Q460N3 678 aa7□□□□□ -1.29
COLCA1-205ENST00000620864 SCGB2B2Q4G0G5 96 aa7□□□□□ -1.29
COLCA1-205ENST00000620864 LRIF1Q5T3J3 769 aa7□□□□□ -1.29
COLCA1-205ENST00000620864 KIAA1211LQ6NV74 962 aa7□□□□□ -1.29
COLCA1-205ENST00000620864 FAM83HQ6ZRV2 1179 aaPredicted RBP7□□□□□ -1.29
COLCA1-205ENST00000620864 UBE2R2Q712K3 238 aaPredicted RBP7□□□□□ -1.29
COLCA1-205ENST00000620864 PDSS2Q86YH6 399 aa7□□□□□ -1.29
COLCA1-205ENST00000620864 MARCH9Q86YJ5 346 aa7□□□□□ -1.29
COLCA1-205ENST00000620864 MRPL41Q8IXM3 137 aaKnown RBP7□□□□□ -1.29
COLCA1-205ENST00000620864 SLC13A3Q8WWT9 602 aa7□□□□□ -1.29
COLCA1-205ENST00000620864 RAB11FIP5Q9BXF6 653 aa7□□□□□ -1.29
COLCA1-205ENST00000620864 FTHL17Q9BXU8 183 aa7□□□□□ -1.29
COLCA1-205ENST00000620864 ADAMTS10Q9H324 1103 aa7□□□□□ -1.29
COLCA1-205ENST00000620864 B3GAT2Q9NPZ5 323 aa7□□□□□ -1.29
COLCA1-205ENST00000620864 MARCH2Q9P0N8 246 aa7□□□□□ -1.29
COLCA1-205ENST00000620864 CNOT6Q9ULM6 557 aaKnown RBP7□□□□□ -1.29
COLCA1-205ENST00000620864 GOLGA4Q13439 2230 aaKnown RBP6.99□□□□□ -1.29
COLCA1-205ENST00000620864 ZNF701M0R085 212 aaPredicted RBP6.99□□□□□ -1.29
COLCA1-205ENST00000620864 ALPPP05187 535 aa6.99□□□□□ -1.29
COLCA1-205ENST00000620864 SELPP16109 830 aa6.99□□□□□ -1.29
COLCA1-205ENST00000620864 NELFEP18615 380 aaKnown RBP6.99□□□□□ -1.29
COLCA1-205ENST00000620864 ITPKAP23677 461 aa6.99□□□□□ -1.29
COLCA1-205ENST00000620864 CCNFP41002 786 aa6.99□□□□□ -1.29
COLCA1-205ENST00000620864 MAP2K3P46734 347 aa6.99□□□□□ -1.29
COLCA1-205ENST00000620864 KCNJ5P48544 419 aa6.99□□□□□ -1.29
COLCA1-205ENST00000620864 CACNG1Q06432 222 aa6.99□□□□□ -1.29
COLCA1-205ENST00000620864 TROAPQ12815 778 aa6.99□□□□□ -1.29
COLCA1-205ENST00000620864 LRRC32Q14392 662 aa6.99□□□□□ -1.29
COLCA1-205ENST00000620864 ZER1Q7Z7L7 766 aa6.99□□□□□ -1.29
COLCA1-205ENST00000620864 CEP97Q8IW35 865 aa6.99□□□□□ -1.29
COLCA1-205ENST00000620864 KIAA0895Q8NCT3 520 aa6.99□□□□□ -1.29
COLCA1-205ENST00000620864 TMEM209Q96SK2 561 aa6.99□□□□□ -1.29
COLCA1-205ENST00000620864 BRINP2Q9C0B6 783 aa6.99□□□□□ -1.29
COLCA1-205ENST00000620864 SLC5A7Q9GZV3 580 aa6.99□□□□□ -1.29
COLCA1-205ENST00000620864 AGO4Q9HCK5 861 aaKnown RBP6.99□□□□□ -1.29
COLCA1-205ENST00000620864 CEMIPQ8WUJ3 1361 aa6.99□□□□□ -1.29
COLCA1-205ENST00000620864 NFASCO94856 1347 aa6.99□□□□□ -1.29
COLCA1-205ENST00000620864 ISM1B1AKI9 464 aa6.99□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms