RNA–Protein interactions for RNA: ENST00000618207.4

CIITA-212, Transcript of class II major histocompatibility complex transactivator, humanhuman

TSL 5 BASIC

Gene CIITA, Length 2,844 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-212ENST00000618207 CXorf40AQ8TE69 158 aa12□□□□□ -0.49
CIITA-212ENST00000618207 SH3KBP1Q96B97 665 aa12□□□□□ -0.49
CIITA-212ENST00000618207 TMIGD2Q96BF3 282 aa12□□□□□ -0.49
CIITA-212ENST00000618207 RMND5BQ96G75 393 aaPredicted RBP12□□□□□ -0.49
CIITA-212ENST00000618207 TRAPPC9Q96Q05 1148 aa12□□□□□ -0.49
CIITA-212ENST00000618207 VPS35Q96QK1 796 aa12□□□□□ -0.49
CIITA-212ENST00000618207 FAM83CQ9BQN1 747 aa12□□□□□ -0.49
CIITA-212ENST00000618207 RPP25Q9BUL9 199 aaKnown RBP12□□□□□ -0.49
CIITA-212ENST00000618207 BDH2Q9BUT1 245 aa12□□□□□ -0.49
CIITA-212ENST00000618207 OR51B5Q9H339 312 aa12□□□□□ -0.49
CIITA-212ENST00000618207 KAT8Q9H7Z6 458 aaKnown RBP12□□□□□ -0.49
CIITA-212ENST00000618207 SMURF2Q9HAU4 748 aa12□□□□□ -0.49
CIITA-212ENST00000618207 DNAAF2Q9NVR5 837 aaKnown RBP12□□□□□ -0.49
CIITA-212ENST00000618207 DPP7Q9UHL4 492 aa12□□□□□ -0.49
CIITA-212ENST00000618207 KCNE2Q9Y6J6 123 aa12□□□□□ -0.49
CIITA-212ENST00000618207 CCDC88CQ9P219 2028 aa11.99□□□□□ -0.49
CIITA-212ENST00000618207 FPGTO14772 594 aa11.99□□□□□ -0.49
CIITA-212ENST00000618207 YY2O15391 372 aa11.99□□□□□ -0.49
CIITA-212ENST00000618207 DIRAS1O95057 198 aa11.99□□□□□ -0.49
CIITA-212ENST00000618207 CDH1P12830 882 aa11.99□□□□□ -0.49
CIITA-212ENST00000618207 RPS9P46781 194 aaKnown RBP11.99□□□□□ -0.49
CIITA-212ENST00000618207 ELP6Q0PNE2 266 aa11.99□□□□□ -0.49
CIITA-212ENST00000618207 GTF2H3Q13889 308 aa11.99□□□□□ -0.49
CIITA-212ENST00000618207 SPIDRQ14159 915 aa11.99□□□□□ -0.49
CIITA-212ENST00000618207 C16orf72Q14CZ0 275 aa11.99□□□□□ -0.49
CIITA-212ENST00000618207 LARP7Q4G0J3 582 aaKnown RBP eCLIP11.99□□□□□ -0.49
CIITA-212ENST00000618207 ZCCHC8Q6NZY4 707 aaKnown RBP11.99□□□□□ -0.49
CIITA-212ENST00000618207 VITQ6UXI7 678 aa11.99□□□□□ -0.49
CIITA-212ENST00000618207 ERN2Q76MJ5 926 aaKnown RBP11.99□□□□□ -0.49
CIITA-212ENST00000618207 ZNF551Q7Z340 670 aaPredicted RBP11.99□□□□□ -0.49
CIITA-212ENST00000618207 WDR20Q8TBZ3 569 aa11.99□□□□□ -0.49
CIITA-212ENST00000618207 SLC47A1Q96FL8 570 aa11.99□□□□□ -0.49
CIITA-212ENST00000618207 ITCHQ96J02 903 aa11.99□□□□□ -0.49
CIITA-212ENST00000618207 SPNS1Q9H2V7 528 aa11.99□□□□□ -0.49
CIITA-212ENST00000618207 MUC13Q9H3R2 512 aa11.99□□□□□ -0.49
CIITA-212ENST00000618207 RMND5AQ9H871 391 aa11.99□□□□□ -0.49
CIITA-212ENST00000618207 PAPOLBQ9NRJ5 636 aaKnown RBP11.99□□□□□ -0.49
CIITA-212ENST00000618207 OR1A2Q9Y585 309 aa11.99□□□□□ -0.49
CIITA-212ENST00000618207 FADS3Q9Y5Q0 445 aa11.99□□□□□ -0.49
CIITA-212ENST00000618207 QSOX1O00391 747 aa11.99□□□□□ -0.49
CIITA-212ENST00000618207 MID1O15344 667 aa11.99□□□□□ -0.49
CIITA-212ENST00000618207 CREG1O75629 220 aa11.99□□□□□ -0.49
CIITA-212ENST00000618207 RB1P06400 928 aa11.99□□□□□ -0.49
CIITA-212ENST00000618207 ANXA4P09525 319 aaPredicted RBP11.99□□□□□ -0.49
CIITA-212ENST00000618207 UMPSP11172 480 aa11.99□□□□□ -0.49
CIITA-212ENST00000618207 FCGR1AP12314 374 aa11.99□□□□□ -0.49
CIITA-212ENST00000618207 AQP1P29972 269 aa11.99□□□□□ -0.49
CIITA-212ENST00000618207 GJA4P35212 333 aa11.99□□□□□ -0.49
CIITA-212ENST00000618207 RPL5P46777 297 aaKnown RBP11.99□□□□□ -0.49
CIITA-212ENST00000618207 TXNL4AP83876 142 aaKnown RBP11.99□□□□□ -0.49
CIITA-212ENST00000618207 IL1RL1Q01638 556 aa11.99□□□□□ -0.49
CIITA-212ENST00000618207 VAC14Q08AM6 782 aa11.99□□□□□ -0.49
CIITA-212ENST00000618207 SLBPQ14493 270 aaKnown RBP eCLIP11.99□□□□□ -0.49
CIITA-212ENST00000618207 INTS11Q5TA45 600 aaKnown RBP11.99□□□□□ -0.49
CIITA-212ENST00000618207 LIPJQ5W064 366 aa11.99□□□□□ -0.49
CIITA-212ENST00000618207 HEATR4Q86WZ0 1026 aa11.99□□□□□ -0.49
CIITA-212ENST00000618207 IQCF2Q8IXL9 164 aa11.99□□□□□ -0.49
CIITA-212ENST00000618207 MICU2Q8IYU8 434 aa11.99□□□□□ -0.49
CIITA-212ENST00000618207 OR5AR1Q8NGP9 310 aa11.99□□□□□ -0.49
CIITA-212ENST00000618207 ATL1Q8WXF7 558 aa11.99□□□□□ -0.49
CIITA-212ENST00000618207 SNX19Q92543 992 aa11.99□□□□□ -0.49
CIITA-212ENST00000618207 FAM192AQ9GZU8 254 aa11.99□□□□□ -0.49
CIITA-212ENST00000618207 NTN4Q9HB63 628 aa11.99□□□□□ -0.49
CIITA-212ENST00000618207 RAD18Q9NS91 495 aa11.99□□□□□ -0.49
CIITA-212ENST00000618207 SLC23A2Q9UGH3 650 aa11.99□□□□□ -0.49
CIITA-212ENST00000618207 MOSPD1Q9UJG1 213 aa11.99□□□□□ -0.49
CIITA-212ENST00000618207 MYRFQ9Y2G1 1151 aa11.99□□□□□ -0.49
CIITA-212ENST00000618207 EPOPA6NHQ4 379 aa11.98□□□□□ -0.49
CIITA-212ENST00000618207 H6PDO95479 791 aa11.98□□□□□ -0.49
CIITA-212ENST00000618207 RAP2AP10114 183 aa11.98□□□□□ -0.49
CIITA-212ENST00000618207 MAPK1P28482 360 aa11.98□□□□□ -0.49
CIITA-212ENST00000618207 OPRD1P41143 372 aa11.98□□□□□ -0.49
CIITA-212ENST00000618207 TMED1Q13445 227 aa11.98□□□□□ -0.49
CIITA-212ENST00000618207 PON2Q15165 354 aa11.98□□□□□ -0.49
CIITA-212ENST00000618207 SPESP1Q6UW49 350 aa11.98□□□□□ -0.49
CIITA-212ENST00000618207 NEK10Q6ZWH5 1172 aa11.98□□□□□ -0.49
CIITA-212ENST00000618207 RTL10Q7L3V2 364 aa11.98□□□□□ -0.49
CIITA-212ENST00000618207 DHRSXQ8N5I4 330 aa11.98□□□□□ -0.49
CIITA-212ENST00000618207 OR4K1Q8NGD4 311 aa11.98□□□□□ -0.49
CIITA-212ENST00000618207 GANCQ8TET4 914 aa11.98□□□□□ -0.49
CIITA-212ENST00000618207 PPP1R16AQ96I34 528 aa11.98□□□□□ -0.49
CIITA-212ENST00000618207 KCNH6Q9H252 994 aa11.98□□□□□ -0.49
CIITA-212ENST00000618207 PRSS16Q9NQE7 514 aa11.98□□□□□ -0.49
CIITA-212ENST00000618207 SERGEFQ9UGK8 458 aa11.98□□□□□ -0.49
CIITA-212ENST00000618207 HCN2Q9UL51 889 aa11.98□□□□□ -0.49
CIITA-212ENST00000618207 AP1G1O43747 822 aa11.98□□□□□ -0.49
CIITA-212ENST00000618207 DEAF1O75398 565 aaPredicted RBP11.98□□□□□ -0.49
CIITA-212ENST00000618207 E2F6O75461 281 aa11.98□□□□□ -0.49
CIITA-212ENST00000618207 KAT7O95251 611 aa11.98□□□□□ -0.49
CIITA-212ENST00000618207 RASAL1O95294 804 aa11.98□□□□□ -0.49
CIITA-212ENST00000618207 PAK4O96013 591 aaPredicted RBP11.98□□□□□ -0.49
CIITA-212ENST00000618207 PABPC4LP0CB38 370 aaKnown RBP11.98□□□□□ -0.49
CIITA-212ENST00000618207 ENGP17813 658 aa11.98□□□□□ -0.49
CIITA-212ENST00000618207 CYP4F2P78329 520 aa11.98□□□□□ -0.49
CIITA-212ENST00000618207 MC1RQ01726 317 aa11.98□□□□□ -0.49
CIITA-212ENST00000618207 RUNX3Q13761 415 aa11.98□□□□□ -0.49
CIITA-212ENST00000618207 CES5AQ6NT32 575 aa11.98□□□□□ -0.49
CIITA-212ENST00000618207 DUS1LQ6P1R4 473 aaKnown RBP11.98□□□□□ -0.49
CIITA-212ENST00000618207 UBE2Q1Q7Z7E8 422 aa11.98□□□□□ -0.49
CIITA-212ENST00000618207 YAF2Q8IY57 180 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms