RNA–Protein interactions for RNA: ENST00000616033.4

MSH6-214, Transcript of mutS homolog 6, humanhuman

TSL 5 BASIC

Gene MSH6, Length 3,429 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-214ENST00000616033 CDC20Q12834 499 aa12.78□□□□□ -0.36
MSH6-214ENST00000616033 NFE2L1Q14494 772 aa12.78□□□□□ -0.36
MSH6-214ENST00000616033 CTSL3PQ5NE16 218 aa12.78□□□□□ -0.36
MSH6-214ENST00000616033 ZNF438Q7Z4V0 828 aa12.78□□□□□ -0.36
MSH6-214ENST00000616033 GPR149Q86SP6 731 aa12.78□□□□□ -0.36
MSH6-214ENST00000616033 NLRP8Q86W28 1048 aa12.78□□□□□ -0.36
MSH6-214ENST00000616033 LSRQ86X29 649 aaPredicted RBP12.78□□□□□ -0.36
MSH6-214ENST00000616033 ATAD1Q8NBU5 361 aa12.78□□□□□ -0.36
MSH6-214ENST00000616033 GPRC5AQ8NFJ5 357 aa12.78□□□□□ -0.36
MSH6-214ENST00000616033 KBTBD8Q8NFY9 601 aa12.78□□□□□ -0.36
MSH6-214ENST00000616033 RTP3Q9BQQ7 232 aa12.78□□□□□ -0.36
MSH6-214ENST00000616033 CCM2Q9BSQ5 444 aa12.78□□□□□ -0.36
MSH6-214ENST00000616033 CCDC88CQ9P219 2028 aa12.78□□□□□ -0.36
MSH6-214ENST00000616033 DNAJC25-GNG10A0A024R161 153 aa12.78□□□□□ -0.36
MSH6-214ENST00000616033 TRAV19A0A0A6YYK7 116 aa12.78□□□□□ -0.36
MSH6-214ENST00000616033 CXCL11O14625 94 aa12.78□□□□□ -0.36
MSH6-214ENST00000616033 ALPIP09923 528 aa12.78□□□□□ -0.36
MSH6-214ENST00000616033 DNAJA1P31689 397 aaKnown RBP12.78□□□□□ -0.36
MSH6-214ENST00000616033 RPS14P62263 151 aaKnown RBP12.78□□□□□ -0.36
MSH6-214ENST00000616033 BAK1Q16611 211 aa12.78□□□□□ -0.36
MSH6-214ENST00000616033 Q5BKY6 102 aa12.78□□□□□ -0.36
MSH6-214ENST00000616033 KLHL17Q6TDP4 642 aa12.78□□□□□ -0.36
MSH6-214ENST00000616033 ZNF551Q7Z340 670 aaPredicted RBP12.78□□□□□ -0.36
MSH6-214ENST00000616033 LAX1Q8IWV1 398 aa12.78□□□□□ -0.36
MSH6-214ENST00000616033 AADATQ8N5Z0 425 aa12.78□□□□□ -0.36
MSH6-214ENST00000616033 ESX1Q8N693 406 aa12.78□□□□□ -0.36
MSH6-214ENST00000616033 ST8SIA2Q92186 375 aa12.78□□□□□ -0.36
MSH6-214ENST00000616033 GGHQ92820 318 aa12.78□□□□□ -0.36
MSH6-214ENST00000616033 MED30Q96HR3 178 aa12.78□□□□□ -0.36
MSH6-214ENST00000616033 YME1L1Q96TA2 773 aa12.78□□□□□ -0.36
MSH6-214ENST00000616033 SLC30A2Q9BRI3 323 aa12.78□□□□□ -0.36
MSH6-214ENST00000616033 GPR63Q9BZJ6 419 aa12.78□□□□□ -0.36
MSH6-214ENST00000616033 HEBP1Q9NRV9 189 aa12.78□□□□□ -0.36
MSH6-214ENST00000616033 ABCB8Q9NUT2 735 aa12.78□□□□□ -0.36
MSH6-214ENST00000616033 MS4A12Q9NXJ0 267 aa12.78□□□□□ -0.36
MSH6-214ENST00000616033 PTCH2Q9Y6C5 1203 aa12.78□□□□□ -0.36
MSH6-214ENST00000616033 COL1A2P08123 1366 aa12.78□□□□□ -0.36
MSH6-214ENST00000616033 MEIOCA2RUB1 952 aa12.77□□□□□ -0.36
MSH6-214ENST00000616033 ERVH48-1M5A8F1 160 aa12.77□□□□□ -0.36
MSH6-214ENST00000616033 HAS3O00219 553 aa12.77□□□□□ -0.36
MSH6-214ENST00000616033 SNAI1O95863 264 aaPredicted RBP12.77□□□□□ -0.36
MSH6-214ENST00000616033 ODC1P11926 461 aa12.77□□□□□ -0.36
MSH6-214ENST00000616033 HLA-DPA1P20036 260 aa12.77□□□□□ -0.36
MSH6-214ENST00000616033 SDHBP21912 280 aa12.77□□□□□ -0.36
MSH6-214ENST00000616033 FAM131AQ6UXB0 335 aa12.77□□□□□ -0.36
MSH6-214ENST00000616033 CDH24Q86UP0 819 aa12.77□□□□□ -0.36
MSH6-214ENST00000616033 PIK3R3Q92569 461 aa12.77□□□□□ -0.36
MSH6-214ENST00000616033 SERPINB11Q96P15 392 aa12.77□□□□□ -0.36
MSH6-214ENST00000616033 CCNB1IP1Q9NPC3 277 aa12.77□□□□□ -0.36
MSH6-214ENST00000616033 TMEM184CQ9NVA4 438 aa12.77□□□□□ -0.36
MSH6-214ENST00000616033 CLCA3PQ9Y6N3 262 aa12.77□□□□□ -0.36
MSH6-214ENST00000616033 PSME4Q14997 1843 aa12.77□□□□□ -0.37
MSH6-214ENST00000616033 CLIC1O00299 241 aa12.77□□□□□ -0.37
MSH6-214ENST00000616033 ARNTLO00327 626 aa12.77□□□□□ -0.37
MSH6-214ENST00000616033 ARHGAP33O14559 1287 aa12.77□□□□□ -0.37
MSH6-214ENST00000616033 AKR7A2O43488 359 aa12.77□□□□□ -0.37
MSH6-214ENST00000616033 TSPAN12O95859 305 aa12.77□□□□□ -0.37
MSH6-214ENST00000616033 CCNYL3P0C7X3 344 aa12.77□□□□□ -0.37
MSH6-214ENST00000616033 ACPPP15309 386 aa12.77□□□□□ -0.37
MSH6-214ENST00000616033 SLC9A3P48764 834 aa12.77□□□□□ -0.37
MSH6-214ENST00000616033 KCNQ1P51787 676 aa12.77□□□□□ -0.37
MSH6-214ENST00000616033 RPS24P62847 133 aaKnown RBP12.77□□□□□ -0.37
MSH6-214ENST00000616033 INO80DQ53TQ3 878 aaPredicted RBP12.77□□□□□ -0.37
MSH6-214ENST00000616033 GNASQ5JWF2 1037 aa12.77□□□□□ -0.37
MSH6-214ENST00000616033 MFSD14CQ5VZR4 134 aa12.77□□□□□ -0.37
MSH6-214ENST00000616033 FAM205BPQ63HN1 556 aa12.77□□□□□ -0.37
MSH6-214ENST00000616033 FAM180BQ6P0A1 224 aa12.77□□□□□ -0.37
MSH6-214ENST00000616033 GALNT7Q86SF2 657 aa12.77□□□□□ -0.37
MSH6-214ENST00000616033 OR9Q2Q8NGE9 314 aa12.77□□□□□ -0.37
MSH6-214ENST00000616033 APH1BQ8WW43 257 aa12.77□□□□□ -0.37
MSH6-214ENST00000616033 SNAPC3Q92966 411 aa12.77□□□□□ -0.37
MSH6-214ENST00000616033 PPP1R2P1Q96PQ5 205 aa12.77□□□□□ -0.37
MSH6-214ENST00000616033 ELOVL6Q9H5J4 265 aa12.77□□□□□ -0.37
MSH6-214ENST00000616033 ELOVL2Q9NXB9 296 aa12.77□□□□□ -0.37
MSH6-214ENST00000616033 ST3GAL5Q9UNP4 418 aa12.77□□□□□ -0.37
MSH6-214ENST00000616033 LYVE1Q9Y5Y7 322 aa12.77□□□□□ -0.37
MSH6-214ENST00000616033 GON4LQ3T8J9 2241 aa12.77□□□□□ -0.37
MSH6-214ENST00000616033 IFRD1O00458 451 aaPredicted RBP12.76□□□□□ -0.37
MSH6-214ENST00000616033 STX16O14662 325 aa12.76□□□□□ -0.37
MSH6-214ENST00000616033 FPGTO14772 594 aa12.76□□□□□ -0.37
MSH6-214ENST00000616033 IRF1P10914 325 aa12.76□□□□□ -0.37
MSH6-214ENST00000616033 ITPKAP23677 461 aa12.76□□□□□ -0.37
MSH6-214ENST00000616033 GRIK2Q13002 908 aa12.76□□□□□ -0.37
MSH6-214ENST00000616033 CDK10Q15131 360 aa12.76□□□□□ -0.37
MSH6-214ENST00000616033 CDONQ4KMG0 1287 aa12.76□□□□□ -0.37
MSH6-214ENST00000616033 AFTPHQ6ULP2 937 aa12.76□□□□□ -0.37
MSH6-214ENST00000616033 JPH3Q8WXH2 748 aaPredicted RBP12.76□□□□□ -0.37
MSH6-214ENST00000616033 COQ8BQ96D53 544 aa12.76□□□□□ -0.37
MSH6-214ENST00000616033 TM6SF2Q9BZW4 377 aa12.76□□□□□ -0.37
MSH6-214ENST00000616033 FAM105AQ9NUU6 356 aa12.76□□□□□ -0.37
MSH6-214ENST00000616033 SAMD4AQ9UPU9 718 aaKnown RBP12.76□□□□□ -0.37
MSH6-214ENST00000616033 PCDHB9Q9Y5E1 797 aa12.76□□□□□ -0.37
MSH6-214ENST00000616033 PEX16Q9Y5Y5 336 aa12.76□□□□□ -0.37
MSH6-214ENST00000616033 NYNRINQ9P2P1 1898 aaKnown RBP12.76□□□□□ -0.37
MSH6-214ENST00000616033 LOC285095A0A1B0GVY8 99 aa12.76□□□□□ -0.37
MSH6-214ENST00000616033 A0A1W2PQ09 198 aa12.76□□□□□ -0.37
MSH6-214ENST00000616033 SLC25A14O95258 325 aaPredicted RBP12.76□□□□□ -0.37
MSH6-214ENST00000616033 PRAMEF12O95522 483 aa12.76□□□□□ -0.37
MSH6-214ENST00000616033 NPPAP01160 153 aa12.76□□□□□ -0.37
MSH6-214ENST00000616033 ADORA3P0DMS8 318 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms