RNA–Protein interactions for RNA: ENST00000614616.4

CHD1-212, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CHD1, Length 8,095 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-212ENST00000614616 HMGN1P05114 100 aa13.42□□□□□ -0.26
CHD1-212ENST00000614616 TGFB3P10600 412 aa13.42□□□□□ -0.26
CHD1-212ENST00000614616 EIF1AXP47813 144 aaKnown RBP13.42□□□□□ -0.26
CHD1-212ENST00000614616 TSPEARQ8WU66 669 aa13.42□□□□□ -0.26
CHD1-212ENST00000614616 APOLD1Q96LR9 279 aa13.42□□□□□ -0.26
CHD1-212ENST00000614616 ZDHHC15Q96MV8 337 aa13.42□□□□□ -0.26
CHD1-212ENST00000614616 BTBD1Q9H0C5 482 aa13.42□□□□□ -0.26
CHD1-212ENST00000614616 OR51V1Q9H2C8 321 aa13.42□□□□□ -0.26
CHD1-212ENST00000614616 FAM86C1Q9NVL1 165 aa13.42□□□□□ -0.26
CHD1-212ENST00000614616 MAFFQ9ULX9 164 aa13.42□□□□□ -0.26
CHD1-212ENST00000614616 NME7Q9Y5B8 376 aa13.42□□□□□ -0.26
CHD1-212ENST00000614616 ADAM10O14672 748 aa13.42□□□□□ -0.26
CHD1-212ENST00000614616 RNASEH2AO75792 299 aaKnown RBP13.42□□□□□ -0.26
CHD1-212ENST00000614616 HTR7P34969 479 aa13.42□□□□□ -0.26
CHD1-212ENST00000614616 SOX10P56693 466 aa13.42□□□□□ -0.26
CHD1-212ENST00000614616 TLE2Q04725 743 aa13.42□□□□□ -0.26
CHD1-212ENST00000614616 C2orf80Q0P641 193 aa13.42□□□□□ -0.26
CHD1-212ENST00000614616 SCARB2Q14108 478 aa13.42□□□□□ -0.26
CHD1-212ENST00000614616 MEDAGQ5VYS4 303 aa13.42□□□□□ -0.26
CHD1-212ENST00000614616 UBE2R2Q712K3 238 aaPredicted RBP13.42□□□□□ -0.26
CHD1-212ENST00000614616 XYLT1Q86Y38 959 aa13.42□□□□□ -0.26
CHD1-212ENST00000614616 CYP2W1Q8TAV3 490 aa13.42□□□□□ -0.26
CHD1-212ENST00000614616 SEMA3CQ99985 751 aa13.42□□□□□ -0.26
CHD1-212ENST00000614616 ABCG4Q9H172 646 aa13.42□□□□□ -0.26
CHD1-212ENST00000614616 ERVK-18Q9QC07 812 aa13.42□□□□□ -0.26
CHD1-212ENST00000614616 GTPBP1O00178 669 aaKnown RBP13.42□□□□□ -0.26
CHD1-212ENST00000614616 GIMD1P0DJR0 217 aa13.42□□□□□ -0.26
CHD1-212ENST00000614616 GMPRP36959 345 aa13.42□□□□□ -0.26
CHD1-212ENST00000614616 NDST2P52849 883 aa13.42□□□□□ -0.26
CHD1-212ENST00000614616 PNLIPRP1P54315 467 aa13.42□□□□□ -0.26
CHD1-212ENST00000614616 KCNJ11Q14654 390 aa13.42□□□□□ -0.26
CHD1-212ENST00000614616 ITIH5Q86UX2 942 aa13.42□□□□□ -0.26
CHD1-212ENST00000614616 NEK7Q8TDX7 302 aa13.42□□□□□ -0.26
CHD1-212ENST00000614616 TMEM27Q9HBJ8 222 aa13.42□□□□□ -0.26
CHD1-212ENST00000614616 NANSQ9NR45 359 aa13.42□□□□□ -0.26
CHD1-212ENST00000614616 CALML5Q9NZT1 146 aa13.42□□□□□ -0.26
CHD1-212ENST00000614616 MROH1Q8NDA8 1641 aa13.42□□□□□ -0.26
CHD1-212ENST00000614616 A0A1B0GUL6 1792 aa13.42□□□□□ -0.26
CHD1-212ENST00000614616 GXYLT2A0PJZ3 443 aa13.41□□□□□ -0.26
CHD1-212ENST00000614616 TISP43B9A030 160 aa13.41□□□□□ -0.26
CHD1-212ENST00000614616 CRTAPO75718 401 aaPredicted RBP13.41□□□□□ -0.26
CHD1-212ENST00000614616 RGS9O75916 674 aaPredicted RBP13.41□□□□□ -0.26
CHD1-212ENST00000614616 RHBDF2Q6PJF5 856 aa13.41□□□□□ -0.26
CHD1-212ENST00000614616 C4orf32Q8N8J7 132 aa13.41□□□□□ -0.26
CHD1-212ENST00000614616 SHKBP1Q8TBC3 707 aa13.41□□□□□ -0.26
CHD1-212ENST00000614616 PTTG3PQ9NZH4 202 aa13.41□□□□□ -0.26
CHD1-212ENST00000614616 POLHQ9Y253 713 aa13.41□□□□□ -0.26
CHD1-212ENST00000614616 TEX13CA0A0J9YWL9 993 aa13.41□□□□□ -0.26
CHD1-212ENST00000614616 ANKRD34BA5PLL1 514 aa13.41□□□□□ -0.26
CHD1-212ENST00000614616 CLIC1O00299 241 aa13.41□□□□□ -0.26
CHD1-212ENST00000614616 KCNAB2Q13303 367 aa13.41□□□□□ -0.26
CHD1-212ENST00000614616 MTFR2Q6P444 385 aa13.41□□□□□ -0.26
CHD1-212ENST00000614616 THRSPQ92748 146 aa13.41□□□□□ -0.26
CHD1-212ENST00000614616 NELL2Q99435 816 aa13.41□□□□□ -0.26
CHD1-212ENST00000614616 ABCG5Q9H222 651 aa13.41□□□□□ -0.26
CHD1-212ENST00000614616 TPT1P8Q9HAU6 139 aa13.41□□□□□ -0.26
CHD1-212ENST00000614616 RANGRFQ9HD47 186 aaPredicted RBP13.41□□□□□ -0.26
CHD1-212ENST00000614616 FBXL3Q9UKT7 428 aa13.41□□□□□ -0.26
CHD1-212ENST00000614616 SEPT4O43236 478 aa13.41□□□□□ -0.26
CHD1-212ENST00000614616 NRIP1P48552 1158 aa13.41□□□□□ -0.26
CHD1-212ENST00000614616 NUMBP49757 651 aa13.41□□□□□ -0.26
CHD1-212ENST00000614616 NTRK2Q16620 822 aa13.41□□□□□ -0.26
CHD1-212ENST00000614616 RETSATQ6NUM9 610 aa13.41□□□□□ -0.26
CHD1-212ENST00000614616 ARL9Q6T311 187 aa13.41□□□□□ -0.26
CHD1-212ENST00000614616 METTL3Q86U44 580 aaKnown RBP13.41□□□□□ -0.26
CHD1-212ENST00000614616 C12orf45Q8N5I9 185 aaPredicted RBP13.41□□□□□ -0.26
CHD1-212ENST00000614616 LRRN4Q8WUT4 740 aa13.41□□□□□ -0.26
CHD1-212ENST00000614616 XPNPEP1Q9NQW7 623 aa13.41□□□□□ -0.26
CHD1-212ENST00000614616 ZNF225Q9UK10 706 aa13.41□□□□□ -0.26
CHD1-212ENST00000614616 RHPN2P1A8MT19 583 aa13.41□□□□□ -0.26
CHD1-212ENST00000614616 SF3A2Q15428 464 aaKnown RBP13.41□□□□□ -0.26
CHD1-212ENST00000614616 BATFQ16520 125 aa13.41□□□□□ -0.26
CHD1-212ENST00000614616 TMEM69Q5SWH9 247 aa13.41□□□□□ -0.26
CHD1-212ENST00000614616 AUTS2Q8WXX7 1259 aa13.41□□□□□ -0.26
CHD1-212ENST00000614616 FAM124BQ9H5Z6 455 aaPredicted RBP13.41□□□□□ -0.26
CHD1-212ENST00000614616 A0A1W2PQL4 384 aaPredicted RBP13.41□□□□□ -0.26
CHD1-212ENST00000614616 GNALP38405 381 aa13.41□□□□□ -0.26
CHD1-212ENST00000614616 EN1Q05925 392 aaPredicted RBP13.41□□□□□ -0.26
CHD1-212ENST00000614616 ECM1Q16610 540 aa13.41□□□□□ -0.26
CHD1-212ENST00000614616 DDX51Q8N8A6 666 aaKnown RBP eCLIP13.41□□□□□ -0.262e-6■■■■■ 28.9
CHD1-212ENST00000614616 OR8J3Q8NGG0 315 aa13.41□□□□□ -0.26
CHD1-212ENST00000614616 SPATA22Q8NHS9 363 aa13.41□□□□□ -0.26
CHD1-212ENST00000614616 DPF3Q92784 378 aa13.41□□□□□ -0.26
CHD1-212ENST00000614616 MROH8Q9H579 483 aa13.41□□□□□ -0.26
CHD1-212ENST00000614616 BEX1Q9HBH7 125 aa13.41□□□□□ -0.26
CHD1-212ENST00000614616 CNTN3Q9P232 1028 aa13.41□□□□□ -0.26
CHD1-212ENST00000614616 NID2Q14112 1375 aa13.41□□□□□ -0.26
CHD1-212ENST00000614616 SCN11AQ9UI33 1791 aa13.41□□□□□ -0.26
CHD1-212ENST00000614616 MT-ND5P03915 603 aa13.41□□□□□ -0.26
CHD1-212ENST00000614616 ETV3P41162 512 aa13.41□□□□□ -0.26
CHD1-212ENST00000614616 BRINP3Q76B58 766 aa13.41□□□□□ -0.26
CHD1-212ENST00000614616 KCTD9Q7L273 389 aa13.41□□□□□ -0.26
CHD1-212ENST00000614616 RAD9AQ99638 391 aa13.41□□□□□ -0.26
CHD1-212ENST00000614616 PELOQ9BRX2 385 aaKnown RBP13.41□□□□□ -0.26
CHD1-212ENST00000614616 SH2B3Q9UQQ2 575 aa13.41□□□□□ -0.26
CHD1-212ENST00000614616 AIPO00170 330 aa13.41□□□□□ -0.26
CHD1-212ENST00000614616 SLC25A27O95847 323 aa13.41□□□□□ -0.26
CHD1-212ENST00000614616 HSDL1Q3SXM5 330 aa13.41□□□□□ -0.26
CHD1-212ENST00000614616 TATDN1Q6P1N9 297 aa13.41□□□□□ -0.26
CHD1-212ENST00000614616 TMPRSS11BQ86T26 416 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms