RNA–Protein interactions for RNA: ENST00000613122.4

CTDP1-208, Transcript of CTD phosphatase subunit 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CTDP1, Length 5,866 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1-208ENST00000613122 DIRAS2Q96HU8 199 aa19.64■□□□□ 0.73
CTDP1-208ENST00000613122 A0A1W2PP55 124 aa19.64■□□□□ 0.73
CTDP1-208ENST00000613122 PDCD5O14737 125 aa19.64■□□□□ 0.73
CTDP1-208ENST00000613122 PGLSO95336 258 aa19.64■□□□□ 0.73
CTDP1-208ENST00000613122 AHSGP02765 367 aa19.64■□□□□ 0.73
CTDP1-208ENST00000613122 ZNF3P17036 446 aa19.64■□□□□ 0.73
CTDP1-208ENST00000613122 SLC6A9P48067 706 aa19.64■□□□□ 0.73
CTDP1-208ENST00000613122 LMAN2Q12907 356 aa19.64■□□□□ 0.73
CTDP1-208ENST00000613122 PTCHD3Q3KNS1 767 aa19.64■□□□□ 0.73
CTDP1-208ENST00000613122 ALG1LQ6GMV1 187 aa19.64■□□□□ 0.73
CTDP1-208ENST00000613122 ZNF598Q86UK7 904 aaKnown RBP19.64■□□□□ 0.73
CTDP1-208ENST00000613122 PROKR2Q8NFJ6 384 aa19.64■□□□□ 0.73
CTDP1-208ENST00000613122 OR56A1Q8NGH5 318 aa19.64■□□□□ 0.73
CTDP1-208ENST00000613122 GALPQ9UBC7 116 aa19.64■□□□□ 0.73
CTDP1-208ENST00000613122 SUSD2Q9UGT4 822 aa19.64■□□□□ 0.73
CTDP1-208ENST00000613122 COMMD3-BMI1R4GMX3 469 aa19.64■□□□□ 0.73
CTDP1-208ENST00000613122 FAM159BA6NKW6 160 aa19.63■□□□□ 0.73
CTDP1-208ENST00000613122 NPIPA5E9PKD4 350 aa19.63■□□□□ 0.73
CTDP1-208ENST00000613122 VEGFBP49765 207 aa19.63■□□□□ 0.73
CTDP1-208ENST00000613122 CRB2Q5IJ48 1285 aa19.63■□□□□ 0.73
CTDP1-208ENST00000613122 OR4F6Q8NGB9 312 aa19.63■□□□□ 0.73
CTDP1-208ENST00000613122 CHID1Q9BWS9 393 aa19.63■□□□□ 0.73
CTDP1-208ENST00000613122 LGR4Q9BXB1 951 aa19.63■□□□□ 0.73
CTDP1-208ENST00000613122 TRPV5Q9NQA5 729 aa19.63■□□□□ 0.73
CTDP1-208ENST00000613122 NPIPA1Q9UND3 350 aa19.63■□□□□ 0.73
CTDP1-208ENST00000613122 BCHEP06276 602 aa19.63■□□□□ 0.73
CTDP1-208ENST00000613122 ITGA3P26006 1051 aa19.63■□□□□ 0.73
CTDP1-208ENST00000613122 GRIA2P42262 883 aa19.63■□□□□ 0.73
CTDP1-208ENST00000613122 PREPP48147 710 aa19.63■□□□□ 0.73
CTDP1-208ENST00000613122 ZC3HC1Q86WB0 502 aaKnown RBP19.63■□□□□ 0.73
CTDP1-208ENST00000613122 UFD1Q92890 307 aa19.63■□□□□ 0.73
CTDP1-208ENST00000613122 WDR92Q96MX6 357 aa19.63■□□□□ 0.73
CTDP1-208ENST00000613122 AKTIPQ9H8T0 292 aa19.63■□□□□ 0.73
CTDP1-208ENST00000613122 MRM3Q9HC36 420 aaKnown RBP19.63■□□□□ 0.73
CTDP1-208ENST00000613122 ONECUT3O60422 494 aaPredicted RBP19.63■□□□□ 0.73
CTDP1-208ENST00000613122 BNIP1Q12981 228 aa19.63■□□□□ 0.73
CTDP1-208ENST00000613122 Q6ZVL8 140 aa19.63■□□□□ 0.73
CTDP1-208ENST00000613122 TLCD1Q96CP7 247 aa19.63■□□□□ 0.73
CTDP1-208ENST00000613122 LRIG1Q96JA1 1093 aa19.63■□□□□ 0.73
CTDP1-208ENST00000613122 MGME1Q9BQP7 344 aa19.63■□□□□ 0.73
CTDP1-208ENST00000613122 TSPAN6O43657 245 aa19.63■□□□□ 0.73
CTDP1-208ENST00000613122 GSRP00390 522 aa19.63■□□□□ 0.73
CTDP1-208ENST00000613122 HMGN1P05114 100 aa19.63■□□□□ 0.73
CTDP1-208ENST00000613122 ANXA8P13928 327 aa19.63■□□□□ 0.73
CTDP1-208ENST00000613122 HSD11B1P28845 292 aa19.63■□□□□ 0.73
CTDP1-208ENST00000613122 AP3S2P59780 193 aa19.63■□□□□ 0.73
CTDP1-208ENST00000613122 OGDHQ02218 1023 aa19.63■□□□□ 0.73
CTDP1-208ENST00000613122 DUOXA1Q1HG43 343 aa19.63■□□□□ 0.73
CTDP1-208ENST00000613122 FITM2Q8N6M3 262 aa19.63■□□□□ 0.73
CTDP1-208ENST00000613122 FAM156AQ8NDB6 213 aa19.63■□□□□ 0.73
CTDP1-208ENST00000613122 NKD1Q969G9 470 aa19.63■□□□□ 0.73
CTDP1-208ENST00000613122 GPR174Q9BXC1 333 aa19.63■□□□□ 0.73
CTDP1-208ENST00000613122 PAK4O96013 591 aaPredicted RBP19.63■□□□□ 0.73
CTDP1-208ENST00000613122 KCNC3Q14003 757 aa19.63■□□□□ 0.73
CTDP1-208ENST00000613122 TMEM214Q6NUQ4 689 aaKnown RBP19.63■□□□□ 0.73
CTDP1-208ENST00000613122 C14orf80Q86SX3 495 aa19.63■□□□□ 0.73
CTDP1-208ENST00000613122 ANKFN1Q8N957 763 aa19.63■□□□□ 0.73
CTDP1-208ENST00000613122 SMG8Q8ND04 991 aaKnown RBP19.63■□□□□ 0.73
CTDP1-208ENST00000613122 F7P08709 466 aaPredicted RBP19.62■□□□□ 0.73
CTDP1-208ENST00000613122 ZNF41P51814 821 aaPredicted RBP19.62■□□□□ 0.73
CTDP1-208ENST00000613122 CREB5Q02930 508 aa19.62■□□□□ 0.73
CTDP1-208ENST00000613122 ADNP2Q6IQ32 1131 aa19.62■□□□□ 0.73
CTDP1-208ENST00000613122 TRIM74Q86UV6 250 aa19.62■□□□□ 0.73
CTDP1-208ENST00000613122 ACTL8Q9H568 366 aa19.62■□□□□ 0.73
CTDP1-208ENST00000613122 RNGTTO60942 597 aaKnown RBP19.62■□□□□ 0.73
CTDP1-208ENST00000613122 RPS13P62277 151 aaKnown RBP19.62■□□□□ 0.73
CTDP1-208ENST00000613122 PLEKHS1Q5SXH7 462 aa19.62■□□□□ 0.73
CTDP1-208ENST00000613122 CHCHD6Q9BRQ6 235 aa19.62■□□□□ 0.73
CTDP1-208ENST00000613122 ZIM2Q9NZV7 527 aa19.62■□□□□ 0.73
CTDP1-208ENST00000613122 PEAK1Q9H792 1746 aa19.62■□□□□ 0.73
CTDP1-208ENST00000613122 TSPAN5P62079 268 aa19.62■□□□□ 0.73
CTDP1-208ENST00000613122 DMPKQ09013 629 aa19.62■□□□□ 0.73
CTDP1-208ENST00000613122 SLC5A9Q2M3M2 681 aa19.62■□□□□ 0.73
CTDP1-208ENST00000613122 KLHL26Q53HC5 615 aa19.62■□□□□ 0.73
CTDP1-208ENST00000613122 QSOX2Q6ZRP7 698 aa19.62■□□□□ 0.73
CTDP1-208ENST00000613122 UBE2J2Q8N2K1 259 aa19.62■□□□□ 0.73
CTDP1-208ENST00000613122 LNX2Q8N448 690 aa19.62■□□□□ 0.73
CTDP1-208ENST00000613122 HERC2P3Q9BVR0 1158 aa19.62■□□□□ 0.73
CTDP1-208ENST00000613122 LYARQ9NX58 379 aaKnown RBP19.62■□□□□ 0.73
CTDP1-208ENST00000613122 GPR34Q9UPC5 381 aa19.62■□□□□ 0.73
CTDP1-208ENST00000613122 CDH1P12830 882 aa19.62■□□□□ 0.73
CTDP1-208ENST00000613122 CD47Q08722 323 aa19.62■□□□□ 0.73
CTDP1-208ENST00000613122 RBM20Q5T481 1227 aaKnown RBP19.62■□□□□ 0.73
CTDP1-208ENST00000613122 OR10G2Q8NGC3 310 aa19.62■□□□□ 0.73
CTDP1-208ENST00000613122 OR52E4Q8NGH9 312 aa19.62■□□□□ 0.73
CTDP1-208ENST00000613122 PHOSPHO1Q8TCT1 267 aa19.62■□□□□ 0.73
CTDP1-208ENST00000613122 FEM1AQ9BSK4 669 aa19.62■□□□□ 0.73
CTDP1-208ENST00000613122 PTGES2Q9H7Z7 377 aa19.62■□□□□ 0.73
CTDP1-208ENST00000613122 TACSTD2P09758 323 aa19.61■□□□□ 0.73
CTDP1-208ENST00000613122 PER3P56645 1201 aa19.61■□□□□ 0.73
CTDP1-208ENST00000613122 RING1Q06587 406 aa19.61■□□□□ 0.73
CTDP1-208ENST00000613122 FAM214AQ32MH5 1076 aa19.61■□□□□ 0.73
CTDP1-208ENST00000613122 SUSD1Q6UWL2 747 aa19.61■□□□□ 0.73
CTDP1-208ENST00000613122 CILP2Q8IUL8 1156 aa19.61■□□□□ 0.73
CTDP1-208ENST00000613122 GEMIN6Q8WXD5 167 aaKnown RBP19.61■□□□□ 0.73
CTDP1-208ENST00000613122 ADAMTS10Q9H324 1103 aa19.61■□□□□ 0.73
CTDP1-208ENST00000613122 C8orf33Q9H7E9 229 aaPredicted RBP19.61■□□□□ 0.73
CTDP1-208ENST00000613122 CENPMQ9NSP4 180 aa19.61■□□□□ 0.73
CTDP1-208ENST00000613122 WBP11Q9Y2W2 641 aaKnown RBP19.61■□□□□ 0.73
CTDP1-208ENST00000613122 PCDHGA2Q9Y5H1 932 aa19.61■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms