RNA–Protein interactions for RNA: ENST00000612946.4

TTC28-208, Transcript of tetratricopeptide repeat domain 28, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TTC28, Length 11,274 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-208ENST00000612946 PGM2L1Q6PCE3 622 aa8.56□□□□□ -1.04
TTC28-208ENST00000612946 SYNPOQ8N3V7 929 aa8.56□□□□□ -1.04
TTC28-208ENST00000612946 KIAA1143Q96AT1 154 aaPredicted RBP8.56□□□□□ -1.04
TTC28-208ENST00000612946 ABCG5Q9H222 651 aa8.56□□□□□ -1.04
TTC28-208ENST00000612946 TAS2R14Q9NYV8 317 aa8.56□□□□□ -1.04
TTC28-208ENST00000612946 CD300AQ9UGN4 299 aa8.56□□□□□ -1.04
TTC28-208ENST00000612946 NOBOXO60393 691 aa8.56□□□□□ -1.04
TTC28-208ENST00000612946 PAX6P26367 422 aa8.56□□□□□ -1.04
TTC28-208ENST00000612946 GTF2H2Q13888 395 aa8.56□□□□□ -1.04
TTC28-208ENST00000612946 LCN8Q6JVE9 175 aa8.56□□□□□ -1.04
TTC28-208ENST00000612946 GTF2H2CQ6P1K8 395 aa8.56□□□□□ -1.04
TTC28-208ENST00000612946 GAREM2Q75VX8 874 aa8.56□□□□□ -1.04
TTC28-208ENST00000612946 TMEM203Q969S6 136 aa8.56□□□□□ -1.04
TTC28-208ENST00000612946 ZBED6CLQ96FA7 236 aaPredicted RBP8.56□□□□□ -1.04
TTC28-208ENST00000612946 HHATLQ9HCP6 504 aa8.56□□□□□ -1.04
TTC28-208ENST00000612946 PROS1P07225 676 aa8.56□□□□□ -1.04
TTC28-208ENST00000612946 DGKGP49619 791 aa8.56□□□□□ -1.04
TTC28-208ENST00000612946 GSK3BP49841 420 aa8.56□□□□□ -1.04
TTC28-208ENST00000612946 TPMTP51580 245 aa8.56□□□□□ -1.04
TTC28-208ENST00000612946 PTPN20Q4JDL3 420 aa8.56□□□□□ -1.04
TTC28-208ENST00000612946 DNM1P34Q6PK57 102 aa8.56□□□□□ -1.04
TTC28-208ENST00000612946 SHKBP1Q8TBC3 707 aa8.56□□□□□ -1.04
TTC28-208ENST00000612946 ABCB8Q9NUT2 735 aa8.56□□□□□ -1.04
TTC28-208ENST00000612946 SLC7A4O43246 635 aa8.56□□□□□ -1.04
TTC28-208ENST00000612946 TLE2Q04725 743 aa8.56□□□□□ -1.04
TTC28-208ENST00000612946 BOP1Q14137 746 aaKnown RBP8.56□□□□□ -1.04
TTC28-208ENST00000612946 ASB18Q6ZVZ8 466 aa8.56□□□□□ -1.04
TTC28-208ENST00000612946 SCGB1C1Q8TD33 95 aa8.56□□□□□ -1.04
TTC28-208ENST00000612946 GTF2H4Q92759 462 aa8.56□□□□□ -1.04
TTC28-208ENST00000612946 OTUB2Q96DC9 234 aa8.56□□□□□ -1.04
TTC28-208ENST00000612946 MYRFLQ96LU7 910 aa8.56□□□□□ -1.04
TTC28-208ENST00000612946 TMEM39AQ9NV64 488 aa8.56□□□□□ -1.04
TTC28-208ENST00000612946 BHLHE40O14503 412 aa8.56□□□□□ -1.04
TTC28-208ENST00000612946 IMPA2O14732 288 aa8.56□□□□□ -1.04
TTC28-208ENST00000612946 TFP02787 698 aa8.56□□□□□ -1.04
TTC28-208ENST00000612946 GBE1Q04446 702 aa8.56□□□□□ -1.04
TTC28-208ENST00000612946 ATG9BQ674R7 924 aa8.56□□□□□ -1.04
TTC28-208ENST00000612946 HIST2H3AQ71DI3 136 aa8.56□□□□□ -1.04
TTC28-208ENST00000612946 C12orf40Q86WS4 652 aa8.56□□□□□ -1.04
TTC28-208ENST00000612946 FAM120CQ9NX05 1096 aaKnown RBP8.56□□□□□ -1.04
TTC28-208ENST00000612946 CNTN3Q9P232 1028 aa8.56□□□□□ -1.04
TTC28-208ENST00000612946 AKAP12Q02952 1782 aa8.56□□□□□ -1.04
TTC28-208ENST00000612946 CD86P42081 329 aa8.56□□□□□ -1.04
TTC28-208ENST00000612946 FGFBP1Q14512 234 aa8.56□□□□□ -1.04
TTC28-208ENST00000612946 KCNJ8Q15842 424 aa8.56□□□□□ -1.04
TTC28-208ENST00000612946 ZNF630Q2M218 657 aaPredicted RBP8.56□□□□□ -1.04
TTC28-208ENST00000612946 ALG10Q5BKT4 473 aa8.56□□□□□ -1.04
TTC28-208ENST00000612946 ZDHHC24Q6UX98 284 aa8.56□□□□□ -1.04
TTC28-208ENST00000612946 RALGPS2Q86X27 583 aaPredicted RBP8.56□□□□□ -1.04
TTC28-208ENST00000612946 FIBCD1Q8N539 461 aa8.56□□□□□ -1.04
TTC28-208ENST00000612946 PCDHGA8Q9Y5G5 932 aa8.56□□□□□ -1.04
TTC28-208ENST00000612946 TEX13CA0A0J9YWL9 993 aa8.55□□□□□ -1.04
TTC28-208ENST00000612946 FAM159BA6NKW6 160 aa8.55□□□□□ -1.04
TTC28-208ENST00000612946 ACKR2O00590 384 aa8.55□□□□□ -1.04
TTC28-208ENST00000612946 CRISP3P54108 245 aa8.55□□□□□ -1.04
TTC28-208ENST00000612946 LASP1Q14847 261 aaKnown RBP8.55□□□□□ -1.04
TTC28-208ENST00000612946 PARP15Q460N3 678 aa8.55□□□□□ -1.04
TTC28-208ENST00000612946 SLC9B1Q4ZJI4 515 aa8.55□□□□□ -1.04
TTC28-208ENST00000612946 FAM46CQ5VWP2 391 aa8.55□□□□□ -1.04
TTC28-208ENST00000612946 CES3Q6UWW8 571 aa8.55□□□□□ -1.04
TTC28-208ENST00000612946 CHST4Q8NCG5 386 aa8.55□□□□□ -1.04
TTC28-208ENST00000612946 FAM84BQ96KN1 310 aaPredicted RBP8.55□□□□□ -1.04
TTC28-208ENST00000612946 ZNF354BQ96LW1 612 aa8.55□□□□□ -1.04
TTC28-208ENST00000612946 ORAI2Q96SN7 254 aa8.55□□□□□ -1.04
TTC28-208ENST00000612946 TMEM94Q12767 1356 aa8.55□□□□□ -1.04
TTC28-208ENST00000612946 SCAMP1O15126 338 aa8.55□□□□□ -1.04
TTC28-208ENST00000612946 RNASEH2AO75792 299 aaKnown RBP8.55□□□□□ -1.04
TTC28-208ENST00000612946 HSD17B1P14061 328 aa8.55□□□□□ -1.04
TTC28-208ENST00000612946 HTR1EP28566 365 aa8.55□□□□□ -1.04
TTC28-208ENST00000612946 HTRA4P83105 476 aaPredicted RBP8.55□□□□□ -1.04
TTC28-208ENST00000612946 CACNG1Q06432 222 aa8.55□□□□□ -1.04
TTC28-208ENST00000612946 ZNF674Q2M3X9 581 aa8.55□□□□□ -1.04
TTC28-208ENST00000612946 LBHQ53QV2 105 aaPredicted RBP8.55□□□□□ -1.04
TTC28-208ENST00000612946 FAM122BQ7Z309 247 aa8.55□□□□□ -1.04
TTC28-208ENST00000612946 MARCH10Q8NA82 808 aaPredicted RBP8.55□□□□□ -1.04
TTC28-208ENST00000612946 OR2T35Q8NGX2 323 aa8.55□□□□□ -1.04
TTC28-208ENST00000612946 EBF1Q9UH73 591 aa8.55□□□□□ -1.04
TTC28-208ENST00000612946 LTN1O94822 1766 aa8.55□□□□□ -1.04
TTC28-208ENST00000612946 NDST3O95803 873 aa8.55□□□□□ -1.04
TTC28-208ENST00000612946 LAMP2P13473 410 aa8.55□□□□□ -1.04
TTC28-208ENST00000612946 NCK1P16333 377 aa8.55□□□□□ -1.04
TTC28-208ENST00000612946 GALK2Q01415 458 aa8.55□□□□□ -1.04
TTC28-208ENST00000612946 NTRK2Q16620 822 aa8.55□□□□□ -1.04
TTC28-208ENST00000612946 EFCAB12Q6NXP0 572 aa8.55□□□□□ -1.04
TTC28-208ENST00000612946 DPPA2Q7Z7J5 298 aa8.55□□□□□ -1.04
TTC28-208ENST00000612946 TMPRSS11BQ86T26 416 aa8.55□□□□□ -1.04
TTC28-208ENST00000612946 SIAH1Q8IUQ4 282 aa8.55□□□□□ -1.04
TTC28-208ENST00000612946 ADGRG2Q8IZP9 1017 aa8.55□□□□□ -1.04
TTC28-208ENST00000612946 MROH8Q9H579 483 aa8.55□□□□□ -1.04
TTC28-208ENST00000612946 ACADMP11310 421 aa8.55□□□□□ -1.04
TTC28-208ENST00000612946 LUMP51884 338 aaPredicted RBP8.55□□□□□ -1.04
TTC28-208ENST00000612946 ST3GAL4Q11206 333 aa8.55□□□□□ -1.04
TTC28-208ENST00000612946 TIGD3Q6B0B8 471 aa8.55□□□□□ -1.04
TTC28-208ENST00000612946 NAT16Q8N8M0 369 aa8.55□□□□□ -1.04
TTC28-208ENST00000612946 ADAMTS19Q8TE59 1207 aa8.55□□□□□ -1.04
TTC28-208ENST00000612946 KCTD12Q96CX2 325 aaKnown RBP8.55□□□□□ -1.04
TTC28-208ENST00000612946 MROQ9BYG7 248 aa8.55□□□□□ -1.04
TTC28-208ENST00000612946 EIF5A2Q9GZV4 153 aaKnown RBP8.55□□□□□ -1.04
TTC28-208ENST00000612946 QRSL1Q9H0R6 528 aaKnown RBP8.55□□□□□ -1.04
TTC28-208ENST00000612946 AP1G1O43747 822 aa8.55□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms