RNA–Protein interactions for RNA: ENST00000612672.1

MMP28-203, Transcript of matrix metallopeptidase 28, humanhuman

TSL 1 (best) BASIC

Gene MMP28, Length 1,092 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP28-203ENST00000612672 NIPBLQ6KC79 2804 aaeCLIP22.18■■□□□ 1.14
MMP28-203ENST00000612672 OR2W5A6NFC9 320 aa22.18■■□□□ 1.14
MMP28-203ENST00000612672 F8W8V4 182 aa22.18■■□□□ 1.14
MMP28-203ENST00000612672 EMP3P54852 163 aa22.18■■□□□ 1.14
MMP28-203ENST00000612672 PRAMEP78395 509 aa22.18■■□□□ 1.14
MMP28-203ENST00000612672 PTRHD1Q6GMV3 140 aaKnown RBP22.18■■□□□ 1.14
MMP28-203ENST00000612672 Q6ZPB1 254 aaPredicted RBP22.18■■□□□ 1.14
MMP28-203ENST00000612672 MDS2Q8NDY4 140 aa22.18■■□□□ 1.14
MMP28-203ENST00000612672 MVB12AQ96EY5 273 aa22.18■■□□□ 1.14
MMP28-203ENST00000612672 GPR137Q96N19 417 aa22.18■■□□□ 1.14
MMP28-203ENST00000612672 STMN3Q9NZ72 180 aa22.18■■□□□ 1.14
MMP28-203ENST00000612672 SPATA7Q9P0W8 599 aa22.18■■□□□ 1.14
MMP28-203ENST00000612672 ARHGEF33A8MVX0 844 aa22.17■■□□□ 1.14
MMP28-203ENST00000612672 ZNF189O75820 626 aaPredicted RBP22.17■■□□□ 1.14
MMP28-203ENST00000612672 ETS1P14921 441 aa22.17■■□□□ 1.14
MMP28-203ENST00000612672 AGAP20933 346 aa22.17■■□□□ 1.14
MMP28-203ENST00000612672 CMPK1P30085 196 aa22.17■■□□□ 1.14
MMP28-203ENST00000612672 SSTR2P30874 369 aa22.17■■□□□ 1.14
MMP28-203ENST00000612672 RBPJQ06330 500 aa22.17■■□□□ 1.14
MMP28-203ENST00000612672 GBX1Q14549 363 aa22.17■■□□□ 1.14
MMP28-203ENST00000612672 ZNF425Q6IV72 752 aa22.17■■□□□ 1.14
MMP28-203ENST00000612672 TTC23LQ6PF05 361 aa22.17■■□□□ 1.14
MMP28-203ENST00000612672 PPP1R21Q6ZMI0 780 aa22.17■■□□□ 1.14
MMP28-203ENST00000612672 PRSS41Q7RTY9 318 aa22.17■■□□□ 1.14
MMP28-203ENST00000612672 CHERPQ8IWX8 916 aaKnown RBP22.17■■□□□ 1.14
MMP28-203ENST00000612672 ACBD4Q8NC06 268 aa22.17■■□□□ 1.14
MMP28-203ENST00000612672 SUN3Q8TAQ9 357 aa22.17■■□□□ 1.14
MMP28-203ENST00000612672 FAM136AQ96C01 138 aa22.17■■□□□ 1.14
MMP28-203ENST00000612672 TUBB6Q9BUF5 446 aa22.17■■□□□ 1.14
MMP28-203ENST00000612672 VN1R1Q9GZP7 353 aa22.17■■□□□ 1.14
MMP28-203ENST00000612672 CHRAC1Q9NRG0 131 aa22.17■■□□□ 1.14
MMP28-203ENST00000612672 ANKRD10Q9NXR5 420 aa22.17■■□□□ 1.14
MMP28-203ENST00000612672 GALPQ9UBC7 116 aa22.17■■□□□ 1.14
MMP28-203ENST00000612672 CDC14AQ9UNH5 594 aa22.17■■□□□ 1.14
MMP28-203ENST00000612672 MEMO1Q9Y316 297 aa22.17■■□□□ 1.14
MMP28-203ENST00000612672 VPS13CQ709C8 3753 aa22.16■■□□□ 1.14
MMP28-203ENST00000612672 SOWAHDA6NJG2 315 aa22.16■■□□□ 1.14
MMP28-203ENST00000612672 A8MUI8 341 aa22.16■■□□□ 1.14
MMP28-203ENST00000612672 FAM227AF5H4B4 570 aa22.16■■□□□ 1.14
MMP28-203ENST00000612672 CD3EAPO15446 510 aaKnown RBP22.16■■□□□ 1.14
MMP28-203ENST00000612672 CLDN14O95500 239 aa22.16■■□□□ 1.14
MMP28-203ENST00000612672 CRADDP78560 199 aa22.16■■□□□ 1.14
MMP28-203ENST00000612672 TUBA3CQ13748 450 aa22.16■■□□□ 1.14
MMP28-203ENST00000612672 SPA17Q15506 151 aa22.16■■□□□ 1.14
MMP28-203ENST00000612672 TUBA3EQ6PEY2 450 aa22.16■■□□□ 1.14
MMP28-203ENST00000612672 SPNS3Q6ZMD2 512 aa22.16■■□□□ 1.14
MMP28-203ENST00000612672 CDH24Q86UP0 819 aa22.16■■□□□ 1.14
MMP28-203ENST00000612672 PLD3Q8IV08 490 aa22.16■■□□□ 1.14
MMP28-203ENST00000612672 CCDC170Q8IYT3 715 aa22.16■■□□□ 1.14
MMP28-203ENST00000612672 MRPS30Q9NP92 439 aaKnown RBP22.16■■□□□ 1.14
MMP28-203ENST00000612672 KLHL1Q9NR64 748 aa22.16■■□□□ 1.14
MMP28-203ENST00000612672 GNPTGQ9UJJ9 305 aa22.16■■□□□ 1.14
MMP28-203ENST00000612672 NIPSNAP2O75323 286 aa22.15■■□□□ 1.14
MMP28-203ENST00000612672 MATN4O95460 622 aa22.15■■□□□ 1.14
MMP28-203ENST00000612672 C8orf89P0DMQ9 161 aa22.15■■□□□ 1.14
MMP28-203ENST00000612672 ESRRAP11474 423 aaPredicted RBP22.15■■□□□ 1.14
MMP28-203ENST00000612672 RPS3P23396 243 aaKnown RBP eCLIP22.15■■□□□ 1.14
MMP28-203ENST00000612672 CCNFP41002 786 aa22.15■■□□□ 1.14
MMP28-203ENST00000612672 EIF3BP55884 814 aaKnown RBP22.15■■□□□ 1.14
MMP28-203ENST00000612672 HSF1Q00613 529 aa22.15■■□□□ 1.14
MMP28-203ENST00000612672 OASLQ15646 514 aaKnown RBP22.15■■□□□ 1.14
MMP28-203ENST00000612672 OTOAQ7RTW8 1153 aa22.15■■□□□ 1.14
MMP28-203ENST00000612672 SPPL2CQ8IUH8 684 aa22.15■■□□□ 1.14
MMP28-203ENST00000612672 SIAH3Q8IW03 269 aa22.15■■□□□ 1.14
MMP28-203ENST00000612672 RNF214Q8ND24 703 aa22.15■■□□□ 1.14
MMP28-203ENST00000612672 PPFIBP2Q8ND30 876 aa22.15■■□□□ 1.14
MMP28-203ENST00000612672 FRMD6Q96NE9 622 aa22.15■■□□□ 1.14
MMP28-203ENST00000612672 BIRC8Q96P09 236 aa22.15■■□□□ 1.14
MMP28-203ENST00000612672 DRC3Q9H069 523 aa22.15■■□□□ 1.14
MMP28-203ENST00000612672 TREX1Q9NSU2 369 aa22.15■■□□□ 1.14
MMP28-203ENST00000612672 TAC3Q9UHF0 121 aa22.15■■□□□ 1.14
MMP28-203ENST00000612672 ERI2A8K979 691 aaKnown RBP22.14■■□□□ 1.13
MMP28-203ENST00000612672 HAT1O14929 419 aa22.14■■□□□ 1.13
MMP28-203ENST00000612672 PRPF4O43172 522 aaKnown RBP eCLIP22.14■■□□□ 1.13
MMP28-203ENST00000612672 ANXA5P08758 320 aa22.14■■□□□ 1.13
MMP28-203ENST00000612672 ARNTP27540 789 aa22.14■■□□□ 1.13
MMP28-203ENST00000612672 CETN2P41208 172 aa22.14■■□□□ 1.13
MMP28-203ENST00000612672 TTPAP49638 278 aa22.14■■□□□ 1.13
MMP28-203ENST00000612672 SMSP52788 366 aa22.14■■□□□ 1.13
MMP28-203ENST00000612672 NAP1L1P55209 391 aaKnown RBP22.14■■□□□ 1.13
MMP28-203ENST00000612672 AARS2Q5JTZ9 985 aaKnown RBP22.14■■□□□ 1.13
MMP28-203ENST00000612672 ACER2Q5QJU3 275 aa22.14■■□□□ 1.13
MMP28-203ENST00000612672 H3F3CQ6NXT2 135 aa22.14■■□□□ 1.13
MMP28-203ENST00000612672 CRLF3Q8IUI8 442 aa22.14■■□□□ 1.13
MMP28-203ENST00000612672 RAB42Q8N4Z0 105 aa22.14■■□□□ 1.13
MMP28-203ENST00000612672 OR9A1PQ8NGU1 263 aa22.14■■□□□ 1.13
MMP28-203ENST00000612672 OR9A4Q8NGU2 314 aa22.14■■□□□ 1.13
MMP28-203ENST00000612672 THAP3Q8WTV1 239 aaPredicted RBP22.14■■□□□ 1.13
MMP28-203ENST00000612672 C14orf79Q96F83 325 aa22.14■■□□□ 1.13
MMP28-203ENST00000612672 SCMH1Q96GD3 660 aa22.14■■□□□ 1.13
MMP28-203ENST00000612672 MAGED4Q96JG8 741 aa22.14■■□□□ 1.13
MMP28-203ENST00000612672 PANX3Q96QZ0 392 aa22.14■■□□□ 1.13
MMP28-203ENST00000612672 PCYOX1Q9UHG3 505 aa22.14■■□□□ 1.13
MMP28-203ENST00000612672 HCFC1P51610 2035 aa22.14■■□□□ 1.13
MMP28-203ENST00000612672 ASPDHA6ND91 283 aa22.13■■□□□ 1.13
MMP28-203ENST00000612672 GOLGA6L9A6NEM1 432 aa22.13■■□□□ 1.13
MMP28-203ENST00000612672 NPIPA5E9PKD4 350 aa22.13■■□□□ 1.13
MMP28-203ENST00000612672 MYO1CO00159 1063 aa22.13■■□□□ 1.13
MMP28-203ENST00000612672 ADAM10O14672 748 aa22.13■■□□□ 1.13
MMP28-203ENST00000612672 VPS26AO75436 327 aa22.13■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms