RNA–Protein interactions for RNA: ENST00000611897.1

HMGB1P24-201, Transcript of high mobility group box 1 pseudogene 24, humanhuman

BASIC

Gene HMGB1P24, Length 328 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P24-201ENST00000611897 SUN3Q8TAQ9 357 aa12.69□□□□□ -0.38
HMGB1P24-201ENST00000611897 HMGCLL1Q8TB92 370 aa12.69□□□□□ -0.38
HMGB1P24-201ENST00000611897 LPGAT1Q92604 370 aa12.69□□□□□ -0.38
HMGB1P24-201ENST00000611897 PHF12Q96QT6 1004 aa12.69□□□□□ -0.38
HMGB1P24-201ENST00000611897 PLCD4Q9BRC7 762 aa12.69□□□□□ -0.38
HMGB1P24-201ENST00000611897 FRMD8P1Q9BZ68 369 aaPredicted RBP12.69□□□□□ -0.38
HMGB1P24-201ENST00000611897 IL22Q9GZX6 179 aa12.69□□□□□ -0.38
HMGB1P24-201ENST00000611897 SYNPO2LQ9H987 977 aa12.69□□□□□ -0.38
HMGB1P24-201ENST00000611897 C14orf105Q9NVL8 296 aa12.69□□□□□ -0.38
HMGB1P24-201ENST00000611897 GALPQ9UBC7 116 aa12.69□□□□□ -0.38
HMGB1P24-201ENST00000611897 GUCA1BQ9UMX6 200 aa12.69□□□□□ -0.38
HMGB1P24-201ENST00000611897 MRPS2Q9Y399 296 aaKnown RBP12.69□□□□□ -0.38
HMGB1P24-201ENST00000611897 IGHV1-45A0A0A0MS14 117 aa12.68□□□□□ -0.38
HMGB1P24-201ENST00000611897 IGHV3-20A0A0C4DH32 117 aa12.68□□□□□ -0.38
HMGB1P24-201ENST00000611897 SMAPO00193 183 aa12.68□□□□□ -0.38
HMGB1P24-201ENST00000611897 CCL21O00585 134 aa12.68□□□□□ -0.38
HMGB1P24-201ENST00000611897 PCDH17O14917 1159 aa12.68□□□□□ -0.38
HMGB1P24-201ENST00000611897 PFDN6O15212 129 aa12.68□□□□□ -0.38
HMGB1P24-201ENST00000611897 P2RX6O15547 441 aa12.68□□□□□ -0.38
HMGB1P24-201ENST00000611897 SEC24DO94855 1032 aaPredicted RBP12.68□□□□□ -0.38
HMGB1P24-201ENST00000611897 BMP10O95393 424 aa12.68□□□□□ -0.38
HMGB1P24-201ENST00000611897 WDPCPO95876 746 aa12.68□□□□□ -0.38
HMGB1P24-201ENST00000611897 FDXRP22570 491 aa12.68□□□□□ -0.38
HMGB1P24-201ENST00000611897 ARNTP27540 789 aa12.68□□□□□ -0.38
HMGB1P24-201ENST00000611897 VPS41P49754 854 aa12.68□□□□□ -0.38
HMGB1P24-201ENST00000611897 TDGF1P3P51864 188 aa12.68□□□□□ -0.38
HMGB1P24-201ENST00000611897 CUL1Q13616 776 aa12.68□□□□□ -0.38
HMGB1P24-201ENST00000611897 KLHL38Q2WGJ6 581 aa12.68□□□□□ -0.38
HMGB1P24-201ENST00000611897 MINDY4Q4G0A6 757 aa12.68□□□□□ -0.38
HMGB1P24-201ENST00000611897 RNF187Q5TA31 235 aaPredicted RBP12.68□□□□□ -0.38
HMGB1P24-201ENST00000611897 FCRLBQ6BAA4 426 aa12.68□□□□□ -0.38
HMGB1P24-201ENST00000611897 RPUSD3Q6P087 351 aaKnown RBP12.68□□□□□ -0.38
HMGB1P24-201ENST00000611897 TMEM207Q6UWW9 146 aa12.68□□□□□ -0.38
HMGB1P24-201ENST00000611897 PAQR7Q86WK9 346 aa12.68□□□□□ -0.38
HMGB1P24-201ENST00000611897 AMER3Q8N944 861 aa12.68□□□□□ -0.38
HMGB1P24-201ENST00000611897 PSMF1Q92530 271 aa12.68□□□□□ -0.38
HMGB1P24-201ENST00000611897 PKP4Q99569 1192 aa12.68□□□□□ -0.38
HMGB1P24-201ENST00000611897 TRIM56Q9BRZ2 755 aaKnown RBP12.68□□□□□ -0.38
HMGB1P24-201ENST00000611897 DRC3Q9H069 523 aa12.68□□□□□ -0.38
HMGB1P24-201ENST00000611897 RBSNQ9H1K0 784 aa12.68□□□□□ -0.38
HMGB1P24-201ENST00000611897 MKKSQ9NPJ1 570 aaPredicted RBP12.68□□□□□ -0.38
HMGB1P24-201ENST00000611897 FAM114A2Q9NRY5 505 aa12.68□□□□□ -0.38
HMGB1P24-201ENST00000611897 POLQO75417 2590 aa12.67□□□□□ -0.38
HMGB1P24-201ENST00000611897 IGLV3-12A0A075B6K2 115 aa12.67□□□□□ -0.38
HMGB1P24-201ENST00000611897 IGKV1-8A0A0C4DH67 115 aa12.67□□□□□ -0.38
HMGB1P24-201ENST00000611897 A8MUI8 341 aa12.67□□□□□ -0.38
HMGB1P24-201ENST00000611897 FAM227AF5H4B4 570 aa12.67□□□□□ -0.38
HMGB1P24-201ENST00000611897 H3BMM5 538 aa12.67□□□□□ -0.38
HMGB1P24-201ENST00000611897 HAT1O14929 419 aa12.67□□□□□ -0.38
HMGB1P24-201ENST00000611897 CCNDBP1O95273 360 aa12.67□□□□□ -0.38
HMGB1P24-201ENST00000611897 RASAL1O95294 804 aa12.67□□□□□ -0.38
HMGB1P24-201ENST00000611897 MATN4O95460 622 aa12.67□□□□□ -0.38
HMGB1P24-201ENST00000611897 PNLIPRP1P54315 467 aa12.67□□□□□ -0.38
HMGB1P24-201ENST00000611897 KCNJ11Q14654 390 aa12.67□□□□□ -0.38
HMGB1P24-201ENST00000611897 PCOLCEQ15113 449 aa12.67□□□□□ -0.38
HMGB1P24-201ENST00000611897 TRIP13Q15645 432 aaPredicted RBP12.67□□□□□ -0.38
HMGB1P24-201ENST00000611897 INAQ16352 499 aa12.67□□□□□ -0.38
HMGB1P24-201ENST00000611897 ICE2Q659A1 982 aa12.67□□□□□ -0.38
HMGB1P24-201ENST00000611897 MRGPRGQ86SM5 289 aa12.67□□□□□ -0.38
HMGB1P24-201ENST00000611897 TMEM139Q8IV31 216 aa12.67□□□□□ -0.38
HMGB1P24-201ENST00000611897 ZC3H7AQ8IWR0 971 aaKnown RBP12.67□□□□□ -0.38
HMGB1P24-201ENST00000611897 METTL21AQ8WXB1 218 aa12.67□□□□□ -0.38
HMGB1P24-201ENST00000611897 CCDC120Q96HB5 630 aa12.67□□□□□ -0.38
HMGB1P24-201ENST00000611897 BIRC8Q96P09 236 aa12.67□□□□□ -0.38
HMGB1P24-201ENST00000611897 RUBCNLQ9H714 662 aa12.67□□□□□ -0.38
HMGB1P24-201ENST00000611897 EIF2B3Q9NR50 452 aaKnown RBP12.67□□□□□ -0.38
HMGB1P24-201ENST00000611897 UTP6Q9NYH9 597 aaKnown RBP12.67□□□□□ -0.38
HMGB1P24-201ENST00000611897 SEC14L3Q9UDX4 400 aa12.67□□□□□ -0.38
HMGB1P24-201ENST00000611897 KLK4Q9Y5K2 254 aa12.67□□□□□ -0.38
HMGB1P24-201ENST00000611897 CACNA1CQ13936 2221 aa12.67□□□□□ -0.38
HMGB1P24-201ENST00000611897 F8P00451 2351 aa12.67□□□□□ -0.38
HMGB1P24-201ENST00000611897 CSMD1Q96PZ7 3565 aa12.67□□□□□ -0.38
HMGB1P24-201ENST00000611897 CCDC168Q8NDH2 2452 aa12.66□□□□□ -0.38
HMGB1P24-201ENST00000611897 CTAGE9A4FU28 777 aa12.66□□□□□ -0.38
HMGB1P24-201ENST00000611897 OR5H15A6NDH6 313 aa12.66□□□□□ -0.38
HMGB1P24-201ENST00000611897 FOXS1O43638 330 aa12.66□□□□□ -0.38
HMGB1P24-201ENST00000611897 PHF2O75151 1096 aa12.66□□□□□ -0.38
HMGB1P24-201ENST00000611897 SLC16A8O95907 504 aa12.66□□□□□ -0.38
HMGB1P24-201ENST00000611897 CRYABP02511 175 aaKnown RBP12.66□□□□□ -0.38
HMGB1P24-201ENST00000611897 ESR1P03372 595 aa12.66□□□□□ -0.38
HMGB1P24-201ENST00000611897 C8orf89P0DMQ9 161 aa12.66□□□□□ -0.38
HMGB1P24-201ENST00000611897 PKMP14618 531 aaKnown RBP12.66□□□□□ -0.38
HMGB1P24-201ENST00000611897 ELAVL4P26378 380 aaKnown RBP12.66□□□□□ -0.38
HMGB1P24-201ENST00000611897 MST1P26927 711 aa12.66□□□□□ -0.38
HMGB1P24-201ENST00000611897 ATP5DP30049 168 aa12.66□□□□□ -0.38
HMGB1P24-201ENST00000611897 KCNJ1P48048 391 aa12.66□□□□□ -0.38
HMGB1P24-201ENST00000611897 NPY2RP49146 381 aa12.66□□□□□ -0.38
HMGB1P24-201ENST00000611897 RBPJQ06330 500 aa12.66□□□□□ -0.38
HMGB1P24-201ENST00000611897 RPS6KA1Q15418 735 aa12.66□□□□□ -0.38
HMGB1P24-201ENST00000611897 TYSND1Q2T9J0 566 aa12.66□□□□□ -0.38
HMGB1P24-201ENST00000611897 BTBD16Q32M84 506 aa12.66□□□□□ -0.38
HMGB1P24-201ENST00000611897 ZNF324BQ6AW86 544 aaPredicted RBP12.66□□□□□ -0.38
HMGB1P24-201ENST00000611897 RIPOR1Q6ZS17 1223 aa12.66□□□□□ -0.38
HMGB1P24-201ENST00000611897 LANCL3Q6ZV70 420 aa12.66□□□□□ -0.38
HMGB1P24-201ENST00000611897 OR9A4Q8NGU2 314 aa12.66□□□□□ -0.38
HMGB1P24-201ENST00000611897 ZCCHC10Q8TBK6 192 aa12.66□□□□□ -0.38
HMGB1P24-201ENST00000611897 ITLN2Q8WWU7 325 aaPredicted RBP12.66□□□□□ -0.38
HMGB1P24-201ENST00000611897 HAS2Q92819 552 aa12.66□□□□□ -0.38
HMGB1P24-201ENST00000611897 MVB12AQ96EY5 273 aa12.66□□□□□ -0.38
HMGB1P24-201ENST00000611897 RBCK1Q9BYM8 510 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms