RNA–Protein interactions for RNA: ENST00000611848.1

SMAD4-217, Transcript of SMAD family member 4, humanhuman

TSL 5

Gene SMAD4, Length 1,648 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-217ENST00000611848 SNRNP200O75643 2136 aaKnown RBP8.53□□□□□ -1.04
SMAD4-217ENST00000611848 OR5K3A6NET4 321 aa8.53□□□□□ -1.04
SMAD4-217ENST00000611848 A8MT66 165 aa8.53□□□□□ -1.04
SMAD4-217ENST00000611848 TOX3O15405 576 aaPredicted RBP8.53□□□□□ -1.04
SMAD4-217ENST00000611848 CAPN5O15484 640 aaPredicted RBP8.53□□□□□ -1.04
SMAD4-217ENST00000611848 PSMG1O95456 288 aa8.53□□□□□ -1.04
SMAD4-217ENST00000611848 MATN4O95460 622 aa8.53□□□□□ -1.04
SMAD4-217ENST00000611848 MPC1LP0DKB6 136 aa8.53□□□□□ -1.04
SMAD4-217ENST00000611848 COX4I1P13073 169 aa8.53□□□□□ -1.04
SMAD4-217ENST00000611848 NCF2P19878 526 aaPredicted RBP8.53□□□□□ -1.04
SMAD4-217ENST00000611848 LSSP48449 732 aa8.53□□□□□ -1.04
SMAD4-217ENST00000611848 RGS4P49798 205 aa8.53□□□□□ -1.04
SMAD4-217ENST00000611848 NFKB2Q00653 900 aa8.53□□□□□ -1.04
SMAD4-217ENST00000611848 PRKG2Q13237 762 aa8.53□□□□□ -1.04
SMAD4-217ENST00000611848 TRMT5Q32P41 509 aaKnown RBP8.53□□□□□ -1.04
SMAD4-217ENST00000611848 LSM12Q3MHD2 195 aaKnown RBP8.53□□□□□ -1.04
SMAD4-217ENST00000611848 ARMC6Q6NXE6 501 aa8.53□□□□□ -1.04
SMAD4-217ENST00000611848 PGM2L1Q6PCE3 622 aa8.53□□□□□ -1.04
SMAD4-217ENST00000611848 ACAD11Q709F0 780 aa8.53□□□□□ -1.04
SMAD4-217ENST00000611848 RAB11FIP2Q7L804 512 aa8.53□□□□□ -1.04
SMAD4-217ENST00000611848 ARHGAP22Q7Z5H3 698 aa8.53□□□□□ -1.04
SMAD4-217ENST00000611848 ISCA2Q86U28 154 aa8.53□□□□□ -1.04
SMAD4-217ENST00000611848 SLC22A9Q8IVM8 553 aa8.53□□□□□ -1.04
SMAD4-217ENST00000611848 FBXO39Q8N4B4 442 aa8.53□□□□□ -1.04
SMAD4-217ENST00000611848 SIDT2Q8NBJ9 832 aaKnown RBP8.53□□□□□ -1.04
SMAD4-217ENST00000611848 OR4E2Q8NGC2 313 aa8.53□□□□□ -1.04
SMAD4-217ENST00000611848 GIMAP7Q8NHV1 300 aa8.53□□□□□ -1.04
SMAD4-217ENST00000611848 CD200R1Q8TD46 325 aa8.53□□□□□ -1.04
SMAD4-217ENST00000611848 ACTRT2Q8TDY3 377 aa8.53□□□□□ -1.04
SMAD4-217ENST00000611848 GATA6Q92908 595 aa8.53□□□□□ -1.04
SMAD4-217ENST00000611848 RAD51AP1Q96B01 352 aa8.53□□□□□ -1.04
SMAD4-217ENST00000611848 NXPE2Q96DL1 559 aa8.53□□□□□ -1.04
SMAD4-217ENST00000611848 MAELQ96JY0 434 aaKnown RBP8.53□□□□□ -1.04
SMAD4-217ENST00000611848 FAR2Q96K12 515 aa8.53□□□□□ -1.04
SMAD4-217ENST00000611848 CCDC74BQ96LY2 380 aa8.53□□□□□ -1.04
SMAD4-217ENST00000611848 HGH1Q9BTY7 390 aa8.53□□□□□ -1.04
SMAD4-217ENST00000611848 THTPAQ9BU02 230 aa8.53□□□□□ -1.04
SMAD4-217ENST00000611848 SRMSQ9H3Y6 488 aa8.53□□□□□ -1.04
SMAD4-217ENST00000611848 WDR55Q9H6Y2 383 aaPredicted RBP8.53□□□□□ -1.04
SMAD4-217ENST00000611848 POLR1BQ9H9Y6 1135 aa8.53□□□□□ -1.04
SMAD4-217ENST00000611848 ACSS2Q9NR19 701 aa8.53□□□□□ -1.04
SMAD4-217ENST00000611848 HRASLS2Q9NWW9 162 aa8.53□□□□□ -1.04
SMAD4-217ENST00000611848 OR6C2Q9NZP2 312 aa8.53□□□□□ -1.04
SMAD4-217ENST00000611848 TMEM9Q9P0T7 183 aa8.53□□□□□ -1.04
SMAD4-217ENST00000611848 SLC7A8Q9UHI5 535 aa8.53□□□□□ -1.04
SMAD4-217ENST00000611848 TDRKHQ9Y2W6 561 aaKnown RBP8.53□□□□□ -1.04
SMAD4-217ENST00000611848 LRRC42Q9Y546 428 aa8.53□□□□□ -1.04
SMAD4-217ENST00000611848 SEC16AO15027 2179 aa8.53□□□□□ -1.04
SMAD4-217ENST00000611848 IGF2RP11717 2491 aa8.52□□□□□ -1.04
SMAD4-217ENST00000611848 OR6C74A6NCV1 312 aa8.52□□□□□ -1.05
SMAD4-217ENST00000611848 TRPC5OSA6NMA1 111 aa8.52□□□□□ -1.05
SMAD4-217ENST00000611848 E9PBE3 544 aa8.52□□□□□ -1.05
SMAD4-217ENST00000611848 PLD2O14939 933 aa8.52□□□□□ -1.05
SMAD4-217ENST00000611848 CCNT2O60583 730 aaKnown RBP8.52□□□□□ -1.05
SMAD4-217ENST00000611848 KLHL41O60662 606 aa8.52□□□□□ -1.05
SMAD4-217ENST00000611848 CIB2O75838 187 aa8.52□□□□□ -1.05
SMAD4-217ENST00000611848 C1orf105O95561 183 aa8.52□□□□□ -1.05
SMAD4-217ENST00000611848 ANKRD34CP0C6C1 535 aa8.52□□□□□ -1.05
SMAD4-217ENST00000611848 IMPDH1P20839 514 aa8.52□□□□□ -1.05
SMAD4-217ENST00000611848 CSTF2P33240 577 aaKnown RBP eCLIP8.52□□□□□ -1.05
SMAD4-217ENST00000611848 SHMT2P34897 504 aa8.52□□□□□ -1.05
SMAD4-217ENST00000611848 GFERP55789 205 aa8.52□□□□□ -1.05
SMAD4-217ENST00000611848 ACTR3P61158 418 aa8.52□□□□□ -1.05
SMAD4-217ENST00000611848 MXRA7P84157 204 aa8.52□□□□□ -1.05
SMAD4-217ENST00000611848 SLC25A3Q00325 362 aa8.52□□□□□ -1.05
SMAD4-217ENST00000611848 HERC3Q15034 1050 aa8.52□□□□□ -1.05
SMAD4-217ENST00000611848 CMPK2Q5EBM0 449 aa8.52□□□□□ -1.05
SMAD4-217ENST00000611848 C3orf38Q5JPI3 329 aa8.52□□□□□ -1.05
SMAD4-217ENST00000611848 SH2D4BQ5SQS7 431 aa8.52□□□□□ -1.05
SMAD4-217ENST00000611848 IRGCQ6NXR0 463 aa8.52□□□□□ -1.05
SMAD4-217ENST00000611848 IGF2-ASQ6U949 168 aa8.52□□□□□ -1.05
SMAD4-217ENST00000611848 AMIGO1Q86WK6 493 aa8.52□□□□□ -1.05
SMAD4-217ENST00000611848 MYLK4Q86YV6 388 aaPredicted RBP8.52□□□□□ -1.05
SMAD4-217ENST00000611848 KIRREL3Q8IZU9 778 aa8.52□□□□□ -1.05
SMAD4-217ENST00000611848 CARFQ8N187 725 aa8.52□□□□□ -1.05
SMAD4-217ENST00000611848 RAB42Q8N4Z0 105 aa8.52□□□□□ -1.05
SMAD4-217ENST00000611848 POU5F2Q8N7G0 328 aa8.52□□□□□ -1.05
SMAD4-217ENST00000611848 CCNYL1Q8N7R7 359 aa8.52□□□□□ -1.05
SMAD4-217ENST00000611848 AGBL5Q8NDL9 886 aa8.52□□□□□ -1.05
SMAD4-217ENST00000611848 AGR3Q8TD06 166 aa8.52□□□□□ -1.05
SMAD4-217ENST00000611848 JPH3Q8WXH2 748 aaPredicted RBP8.52□□□□□ -1.05
SMAD4-217ENST00000611848 L3HYPDHQ96EM0 354 aa8.52□□□□□ -1.05
SMAD4-217ENST00000611848 TGM7Q96PF1 710 aa8.52□□□□□ -1.05
SMAD4-217ENST00000611848 CD180Q99467 661 aa8.52□□□□□ -1.05
SMAD4-217ENST00000611848 SLC30A3Q99726 388 aa8.52□□□□□ -1.05
SMAD4-217ENST00000611848 TRMOQ9BU70 441 aa8.52□□□□□ -1.05
SMAD4-217ENST00000611848 NUF2Q9BZD4 464 aa8.52□□□□□ -1.05
SMAD4-217ENST00000611848 UNKQ9C0B0 810 aaKnown RBP8.52□□□□□ -1.05
SMAD4-217ENST00000611848 EML4Q9HC35 981 aaKnown RBP8.52□□□□□ -1.05
SMAD4-217ENST00000611848 SEMA5BQ9P283 1151 aa8.52□□□□□ -1.05
SMAD4-217ENST00000611848 STX18Q9P2W9 335 aaKnown RBP8.52□□□□□ -1.05
SMAD4-217ENST00000611848 STOML1Q9UBI4 398 aa8.52□□□□□ -1.05
SMAD4-217ENST00000611848 SATB2Q9UPW6 733 aa8.52□□□□□ -1.05
SMAD4-217ENST00000611848 LOXL2Q9Y4K0 774 aa8.52□□□□□ -1.05
SMAD4-217ENST00000611848 AK5Q9Y6K8 562 aa8.52□□□□□ -1.05
SMAD4-217ENST00000611848 TMEM8BA6NDV4 472 aa8.51□□□□□ -1.05
SMAD4-217ENST00000611848 SDHDO14521 159 aa8.51□□□□□ -1.05
SMAD4-217ENST00000611848 PSIP1O75475 530 aaKnown RBP8.51□□□□□ -1.05
SMAD4-217ENST00000611848 KRT36O76013 467 aa8.51□□□□□ -1.05
SMAD4-217ENST00000611848 DXOO77932 396 aaKnown RBP8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms