RNA–Protein interactions for RNA: ENST00000608988.5

SHANK2-220, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 5

Gene SHANK2, Length 1,879 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-220ENST00000608988 ELOVL6Q9H5J4 265 aa21.69■■□□□ 1.06
SHANK2-220ENST00000608988 ZNF221Q9UK13 617 aa21.69■■□□□ 1.06
SHANK2-220ENST00000608988 CFL2Q9Y281 166 aa21.69■■□□□ 1.06
SHANK2-220ENST00000608988 FNDC3AQ9Y2H6 1198 aaKnown RBP21.69■■□□□ 1.06
SHANK2-220ENST00000608988 KCNE1BA0A087WTH5 132 aa21.69■■□□□ 1.06
SHANK2-220ENST00000608988 TBKBP1A7MCY6 615 aa21.69■■□□□ 1.06
SHANK2-220ENST00000608988 ZW10O43264 779 aa21.69■■□□□ 1.06
SHANK2-220ENST00000608988 IDH3BO43837 385 aa21.69■■□□□ 1.06
SHANK2-220ENST00000608988 KRT75O95678 551 aa21.69■■□□□ 1.06
SHANK2-220ENST00000608988 NEK2P51955 445 aa21.69■■□□□ 1.06
SHANK2-220ENST00000608988 IRF3Q14653 427 aa21.69■■□□□ 1.06
SHANK2-220ENST00000608988 CCDC190Q86UF4 302 aa21.69■■□□□ 1.06
SHANK2-220ENST00000608988 SYTL1Q8IYJ3 562 aa21.69■■□□□ 1.06
SHANK2-220ENST00000608988 SYNPOQ8N3V7 929 aa21.69■■□□□ 1.06
SHANK2-220ENST00000608988 C7orf34Q96L11 122 aa21.69■■□□□ 1.06
SHANK2-220ENST00000608988 TSSK3Q96PN8 268 aa21.69■■□□□ 1.06
SHANK2-220ENST00000608988 NUAK2Q9H093 628 aa21.69■■□□□ 1.06
SHANK2-220ENST00000608988 ADPRHL2Q9NX46 363 aa21.69■■□□□ 1.06
SHANK2-220ENST00000608988 SIRT5Q9NXA8 310 aa21.69■■□□□ 1.06
SHANK2-220ENST00000608988 CRNNQ9UBG3 495 aaPredicted RBP21.69■■□□□ 1.06
SHANK2-220ENST00000608988 TSR3Q9UJK0 312 aaKnown RBP21.69■■□□□ 1.06
SHANK2-220ENST00000608988 DNMT3LQ9UJW3 386 aa21.69■■□□□ 1.06
SHANK2-220ENST00000608988 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP21.69■■□□□ 1.06
SHANK2-220ENST00000608988 A0A075B6Q4 140 aa21.68■■□□□ 1.06
SHANK2-220ENST00000608988 TIE1P35590 1138 aa21.68■■□□□ 1.06
SHANK2-220ENST00000608988 PIK3CBP42338 1070 aa21.68■■□□□ 1.06
SHANK2-220ENST00000608988 KCNQ1P51787 676 aa21.68■■□□□ 1.06
SHANK2-220ENST00000608988 SMARCB1Q12824 385 aa21.68■■□□□ 1.06
SHANK2-220ENST00000608988 VTCN1Q7Z7D3 282 aa21.68■■□□□ 1.06
SHANK2-220ENST00000608988 HEATR4Q86WZ0 1026 aa21.68■■□□□ 1.06
SHANK2-220ENST00000608988 L3MBTL4Q8NA19 623 aa21.68■■□□□ 1.06
SHANK2-220ENST00000608988 TMCO6Q96DC7 493 aa21.68■■□□□ 1.06
SHANK2-220ENST00000608988 EMILIN2Q9BXX0 1053 aa21.68■■□□□ 1.06
SHANK2-220ENST00000608988 CWH43Q9H720 699 aa21.68■■□□□ 1.06
SHANK2-220ENST00000608988 CCSER2Q9H7U1 834 aa21.68■■□□□ 1.06
SHANK2-220ENST00000608988 POFUT2Q9Y2G5 429 aa21.68■■□□□ 1.06
SHANK2-220ENST00000608988 SCN10AQ9Y5Y9 1956 aa21.67■■□□□ 1.06
SHANK2-220ENST00000608988 MAGEB17A8MXT2 336 aa21.67■■□□□ 1.06
SHANK2-220ENST00000608988 ADAMDEC1O15204 470 aa21.67■■□□□ 1.06
SHANK2-220ENST00000608988 KMOO15229 486 aa21.67■■□□□ 1.06
SHANK2-220ENST00000608988 AOC2O75106 756 aa21.67■■□□□ 1.06
SHANK2-220ENST00000608988 ANXA8P13928 327 aa21.67■■□□□ 1.06
SHANK2-220ENST00000608988 GTF2E2P29084 291 aaKnown RBP21.67■■□□□ 1.06
SHANK2-220ENST00000608988 NR4A2P43354 598 aa21.67■■□□□ 1.06
SHANK2-220ENST00000608988 RGS6P49758 472 aa21.67■■□□□ 1.06
SHANK2-220ENST00000608988 SLC14A1Q13336 389 aa21.67■■□□□ 1.06
SHANK2-220ENST00000608988 CTXN3Q4LDR2 81 aa21.67■■□□□ 1.06
SHANK2-220ENST00000608988 DDX59Q5T1V6 619 aaKnown RBP eCLIP21.67■■□□□ 1.061e-6■■■■■ 29.6
SHANK2-220ENST00000608988 GLB1LQ6UWU2 654 aa21.67■■□□□ 1.06
SHANK2-220ENST00000608988 LKAAEAR1Q8TD35 194 aa21.67■■□□□ 1.06
SHANK2-220ENST00000608988 PANX1Q96RD7 426 aa21.67■■□□□ 1.06
SHANK2-220ENST00000608988 HTATIP2Q9BUP3 242 aa21.67■■□□□ 1.06
SHANK2-220ENST00000608988 KCTD5Q9NXV2 234 aa21.67■■□□□ 1.06
SHANK2-220ENST00000608988 EHD3Q9NZN3 535 aa21.67■■□□□ 1.06
SHANK2-220ENST00000608988 MAPRE3Q9UPY8 281 aa21.67■■□□□ 1.06
SHANK2-220ENST00000608988 WBP11Q9Y2W2 641 aaKnown RBP21.67■■□□□ 1.06
SHANK2-220ENST00000608988 NOX1Q9Y5S8 564 aa21.67■■□□□ 1.06
SHANK2-220ENST00000608988 A0A1B0GVM2 712 aa21.66■■□□□ 1.06
SHANK2-220ENST00000608988 CBX4O00257 560 aa21.66■■□□□ 1.06
SHANK2-220ENST00000608988 DUSP11O75319 330 aaKnown RBP21.66■■□□□ 1.06
SHANK2-220ENST00000608988 PRAMEF1O95521 474 aa21.66■■□□□ 1.06
SHANK2-220ENST00000608988 ACRV1P26436 265 aa21.66■■□□□ 1.06
SHANK2-220ENST00000608988 SLC19A1P41440 591 aa21.66■■□□□ 1.06
SHANK2-220ENST00000608988 COPZ1P61923 177 aa21.66■■□□□ 1.06
SHANK2-220ENST00000608988 HKDC1Q2TB90 917 aa21.66■■□□□ 1.06
SHANK2-220ENST00000608988 OR4F3Q6IEY1 312 aa21.66■■□□□ 1.06
SHANK2-220ENST00000608988 ATAD1Q8NBU5 361 aa21.66■■□□□ 1.06
SHANK2-220ENST00000608988 OR8J2Q8NGG1 315 aa21.66■■□□□ 1.06
SHANK2-220ENST00000608988 UBE2FQ969M7 185 aa21.66■■□□□ 1.06
SHANK2-220ENST00000608988 C3orf14Q9HBI5 128 aa21.66■■□□□ 1.06
SHANK2-220ENST00000608988 LHX3Q9UBR4 397 aa21.66■■□□□ 1.06
SHANK2-220ENST00000608988 SUV39H1O43463 412 aa21.66■■□□□ 1.06
SHANK2-220ENST00000608988 DIRAS1O95057 198 aa21.66■■□□□ 1.06
SHANK2-220ENST00000608988 TRAPPC2P0DI81 140 aa21.66■■□□□ 1.06
SHANK2-220ENST00000608988 TRAPPC2BP0DI82 140 aa21.66■■□□□ 1.06
SHANK2-220ENST00000608988 ADORA3P0DMS8 318 aa21.66■■□□□ 1.06
SHANK2-220ENST00000608988 AKR1A1P14550 325 aa21.66■■□□□ 1.06
SHANK2-220ENST00000608988 AMD1P17707 334 aa21.66■■□□□ 1.06
SHANK2-220ENST00000608988 NFATC2Q13469 925 aa21.66■■□□□ 1.06
SHANK2-220ENST00000608988 MRPL58Q14197 206 aaKnown RBP21.66■■□□□ 1.06
SHANK2-220ENST00000608988 CPSF6Q16630 551 aaKnown RBP eCLIP21.66■■□□□ 1.06
SHANK2-220ENST00000608988 GPR33Q49SQ1 333 aa21.66■■□□□ 1.06
SHANK2-220ENST00000608988 C19orf48Q6RUI8 117 aa21.66■■□□□ 1.06
SHANK2-220ENST00000608988 NANOGNBQ7Z5D8 188 aa21.66■■□□□ 1.06
SHANK2-220ENST00000608988 ZNF605Q86T29 641 aa21.66■■□□□ 1.06
SHANK2-220ENST00000608988 UBQLNLQ8IYU4 475 aa21.66■■□□□ 1.06
SHANK2-220ENST00000608988 ST13P5Q8NFI4 369 aaPredicted RBP21.66■■□□□ 1.06
SHANK2-220ENST00000608988 GPR152Q8TDT2 470 aa21.66■■□□□ 1.06
SHANK2-220ENST00000608988 PLD4Q96BZ4 506 aa21.66■■□□□ 1.06
SHANK2-220ENST00000608988 MYOCQ99972 504 aa21.66■■□□□ 1.06
SHANK2-220ENST00000608988 PCDHB11Q9Y5F2 797 aa21.66■■□□□ 1.06
SHANK2-220ENST00000608988 GAPDHSO14556 408 aaPredicted RBP21.65■■□□□ 1.06
SHANK2-220ENST00000608988 ABCB1P08183 1280 aaPredicted RBP21.65■■□□□ 1.06
SHANK2-220ENST00000608988 EPORP19235 508 aa21.65■■□□□ 1.06
SHANK2-220ENST00000608988 TACR1P25103 407 aa21.65■■□□□ 1.06
SHANK2-220ENST00000608988 C21orf33P30042 268 aaPredicted RBP21.65■■□□□ 1.06
SHANK2-220ENST00000608988 ATP5C1P36542 298 aaKnown RBP21.65■■□□□ 1.06
SHANK2-220ENST00000608988 ALDH9A1P49189 494 aa21.65■■□□□ 1.06
SHANK2-220ENST00000608988 KCNJ10P78508 379 aa21.65■■□□□ 1.06
SHANK2-220ENST00000608988 ARHGEF7Q14155 803 aa21.65■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms